RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 USP17L12C9JPN9 530 aa9.01□□□□□ -0.97
C11orf54-203ENST00000526335 USP17L11C9JVI0 530 aa9.01□□□□□ -0.97
C11orf54-203ENST00000526335 USP17L21D6R901 530 aa9.01□□□□□ -0.97
C11orf54-203ENST00000526335 USP17L18D6R9N7 530 aa9.01□□□□□ -0.97
C11orf54-203ENST00000526335 USP17L22D6RA61 530 aa9.01□□□□□ -0.97
C11orf54-203ENST00000526335 USP17L17D6RBQ6 530 aa9.01□□□□□ -0.97
C11orf54-203ENST00000526335 USP17L19D6RCP7 530 aa9.01□□□□□ -0.97
C11orf54-203ENST00000526335 USP17L20D6RJB6 530 aa9.01□□□□□ -0.97
C11orf54-203ENST00000526335 DDX3YO15523 660 aaKnown RBP9.01□□□□□ -0.97
C11orf54-203ENST00000526335 USP17L24Q0WX57 530 aa9.01□□□□□ -0.97
C11orf54-203ENST00000526335 ANKRD34AQ69YU3 496 aa9.01□□□□□ -0.97
C11orf54-203ENST00000526335 ANKMY2Q8IV38 441 aa9.01□□□□□ -0.97
C11orf54-203ENST00000526335 FNBP4Q8N3X1 1017 aaPredicted RBP9.01□□□□□ -0.97
C11orf54-203ENST00000526335 PPP1R12CQ9BZL4 782 aa9.01□□□□□ -0.97
C11orf54-203ENST00000526335 FAM196BA6NMK8 535 aa9□□□□□ -0.97
C11orf54-203ENST00000526335 DGKZQ13574 1117 aa9□□□□□ -0.97
C11orf54-203ENST00000526335 KRTAP19-4Q3LI73 84 aa9□□□□□ -0.97
C11orf54-203ENST00000526335 KANK4Q5T7N3 995 aaPredicted RBP9□□□□□ -0.97
C11orf54-203ENST00000526335 CALR3Q96L12 384 aaKnown RBP9□□□□□ -0.97
C11orf54-203ENST00000526335 LACRTQ9GZZ8 138 aa9□□□□□ -0.97
C11orf54-203ENST00000526335 MMP20O60882 483 aa8.99□□□□□ -0.97
C11orf54-203ENST00000526335 VTI1AQ96AJ9 217 aa8.99□□□□□ -0.97
C11orf54-203ENST00000526335 VRTNQ9H8Y1 702 aa8.99□□□□□ -0.97
C11orf54-203ENST00000526335 PAK6Q9NQU5 681 aaPredicted RBP8.99□□□□□ -0.97
C11orf54-203ENST00000526335 USP20Q9Y2K6 914 aa8.99□□□□□ -0.97
C11orf54-203ENST00000526335 BIN1O00499 593 aa8.99□□□□□ -0.97
C11orf54-203ENST00000526335 FSCN2O14926 492 aa8.99□□□□□ -0.97
C11orf54-203ENST00000526335 GAS2O43903 313 aaKnown RBP8.99□□□□□ -0.97
C11orf54-203ENST00000526335 MICAL2O94851 1124 aa8.99□□□□□ -0.97
C11orf54-203ENST00000526335 MAP4P27816 1152 aaKnown RBP8.99□□□□□ -0.97
C11orf54-203ENST00000526335 CPSF6Q16630 551 aaKnown RBP eCLIP8.99□□□□□ -0.97
C11orf54-203ENST00000526335 CARMIL2Q6F5E8 1435 aa8.99□□□□□ -0.97
C11orf54-203ENST00000526335 ERICH6Q7L0X2 663 aa8.99□□□□□ -0.97
C11orf54-203ENST00000526335 KLHL23Q8NBE8 558 aa8.99□□□□□ -0.97
C11orf54-203ENST00000526335 FOXD4L4Q8WXT5 416 aaPredicted RBP8.99□□□□□ -0.97
C11orf54-203ENST00000526335 B8ZZF3 427 aa8.98□□□□□ -0.97
C11orf54-203ENST00000526335 TM4SF5O14894 197 aa8.98□□□□□ -0.97
C11orf54-203ENST00000526335 CYP26A1O43174 497 aa8.98□□□□□ -0.97
C11orf54-203ENST00000526335 XYLBO75191 536 aa8.98□□□□□ -0.97
C11orf54-203ENST00000526335 RXRBP28702 533 aa8.98□□□□□ -0.97
C11orf54-203ENST00000526335 CDC27P30260 824 aa8.98□□□□□ -0.97
C11orf54-203ENST00000526335 FAM117BQ6P1L5 589 aa8.98□□□□□ -0.97
C11orf54-203ENST00000526335 SLC38A3Q99624 504 aa8.98□□□□□ -0.97
C11orf54-203ENST00000526335 QTRT2Q9H974 415 aaKnown RBP8.98□□□□□ -0.97
C11orf54-203ENST00000526335 RTCBQ9Y3I0 505 aaKnown RBP8.98□□□□□ -0.97
C11orf54-203ENST00000526335 FOXO3O43524 673 aa8.97□□□□□ -0.97
C11orf54-203ENST00000526335 LMOD1P29536 600 aaPredicted RBP8.97□□□□□ -0.97
C11orf54-203ENST00000526335 ADAM11O75078 769 aa8.96□□□□□ -0.98
C11orf54-203ENST00000526335 C11orf91Q3C1V1 193 aa8.96□□□□□ -0.98
C11orf54-203ENST00000526335 FDX2Q6P4F2 183 aa8.96□□□□□ -0.98
C11orf54-203ENST00000526335 EGFRP00533 1210 aa8.95□□□□□ -0.98
C11orf54-203ENST00000526335 WEE1P30291 646 aa8.95□□□□□ -0.98
C11orf54-203ENST00000526335 SOX18P35713 384 aa8.95□□□□□ -0.98
C11orf54-203ENST00000526335 SGO2Q562F6 1265 aa8.95□□□□□ -0.98
C11orf54-203ENST00000526335 SHISA5Q8N114 240 aa8.95□□□□□ -0.98
C11orf54-203ENST00000526335 CMTR1Q8N1G2 835 aaKnown RBP8.95□□□□□ -0.98
C11orf54-203ENST00000526335 MYO19Q96H55 970 aa8.95□□□□□ -0.98
C11orf54-203ENST00000526335 KRTAP9-3Q9BYQ3 159 aa8.95□□□□□ -0.98
C11orf54-203ENST00000526335 RNF208Q9H0X6 261 aa8.95□□□□□ -0.98
C11orf54-203ENST00000526335 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.95□□□□□ -0.98
C11orf54-203ENST00000526335 HOXD8P13378 290 aaPredicted RBP8.94□□□□□ -0.98
C11orf54-203ENST00000526335 BUD31P41223 144 aaPredicted RBP8.94□□□□□ -0.98
C11orf54-203ENST00000526335 CEP135Q66GS9 1140 aa8.94□□□□□ -0.98
C11orf54-203ENST00000526335 METTL22Q9BUU2 404 aaPredicted RBP8.94□□□□□ -0.98
C11orf54-203ENST00000526335 KLHDC7BQ96G42 594 aa8.93□□□□□ -0.98
C11orf54-203ENST00000526335 ARXQ96QS3 562 aa8.93□□□□□ -0.98
C11orf54-203ENST00000526335 OPLAHO14841 1288 aa8.92□□□□□ -0.98
C11orf54-203ENST00000526335 C14orf37Q86TY3 774 aa8.92□□□□□ -0.98
C11orf54-203ENST00000526335 SMNDC1O75940 238 aaKnown RBP eCLIP8.91□□□□□ -0.98
C11orf54-203ENST00000526335 ATP11AP98196 1134 aa8.91□□□□□ -0.98
C11orf54-203ENST00000526335 RGL4Q8IZJ4 473 aa8.91□□□□□ -0.98
C11orf54-203ENST00000526335 SEC31BQ9NQW1 1179 aa8.91□□□□□ -0.98
C11orf54-203ENST00000526335 PLCL1Q15111 1095 aa8.9□□□□□ -0.98
C11orf54-203ENST00000526335 NFKBIBQ15653 356 aa8.9□□□□□ -0.98
C11orf54-203ENST00000526335 FAM200AQ8TCP9 573 aa8.9□□□□□ -0.98
C11orf54-203ENST00000526335 RUSC1Q9BVN2 902 aa8.9□□□□□ -0.98
C11orf54-203ENST00000526335 A6NJR5 290 aa8.89□□□□□ -0.99
C11orf54-203ENST00000526335 ZNF792Q3KQV3 632 aa8.89□□□□□ -0.99
C11orf54-203ENST00000526335 TREML1Q86YW5 311 aa8.89□□□□□ -0.99
C11orf54-203ENST00000526335 FAM168AQ92567 244 aa8.89□□□□□ -0.99
C11orf54-203ENST00000526335 SH2B1Q9NRF2 756 aaPredicted RBP8.89□□□□□ -0.99
C11orf54-203ENST00000526335 LRFN2Q9ULH4 789 aa8.89□□□□□ -0.99
C11orf54-203ENST00000526335 EPHA1P21709 976 aa8.88□□□□□ -0.99
C11orf54-203ENST00000526335 SPACA7Q96KW9 195 aa8.88□□□□□ -0.99
C11orf54-203ENST00000526335 FAM95CA0A1B0GW59 222 aa8.87□□□□□ -0.99
C11orf54-203ENST00000526335 PAOXQ6QHF9 649 aa8.87□□□□□ -0.99
C11orf54-203ENST00000526335 NLRP12P59046 1061 aa8.86□□□□□ -0.99
C11orf54-203ENST00000526335 ADAMTSL4Q6UY14 1074 aa8.86□□□□□ -0.99
C11orf54-203ENST00000526335 TOX2Q96NM4 488 aa8.86□□□□□ -0.99
C11orf54-203ENST00000526335 FAM177BA6PVY3 158 aa8.86□□□□□ -0.99
C11orf54-203ENST00000526335 RFX1P22670 979 aa8.86□□□□□ -0.99
C11orf54-203ENST00000526335 ADMP35318 185 aa8.86□□□□□ -0.99
C11orf54-203ENST00000526335 TMEM40Q8WWA1 233 aa8.86□□□□□ -0.99
C11orf54-203ENST00000526335 TBC1D32Q96NH3 1257 aa8.86□□□□□ -0.99
C11orf54-203ENST00000526335 KRTAP9-8Q9BYQ0 159 aa8.86□□□□□ -0.99
C11orf54-203ENST00000526335 KCNMB2Q9Y691 235 aa8.86□□□□□ -0.99
C11orf54-203ENST00000526335 FKBP5Q13451 457 aaPredicted RBP8.85□□□□□ -0.99
C11orf54-203ENST00000526335 COX20Q5RI15 118 aa8.85□□□□□ -0.99
C11orf54-203ENST00000526335 CFAP70Q5T0N1 1121 aa8.85□□□□□ -0.99
C11orf54-203ENST00000526335 C12orf50Q8NA57 414 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms