RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 USP17L4A6NCW7 530 aa16.94■□□□□ 0.3
USH1C-203ENST00000526181 KCNJ4P48050 445 aa16.94■□□□□ 0.3
USH1C-203ENST00000526181 TAF7LQ5H9L4 462 aa16.94■□□□□ 0.3
USH1C-203ENST00000526181 LDHAL6AQ6ZMR3 332 aa16.94■□□□□ 0.3
USH1C-203ENST00000526181 USP17L1Q7RTZ2 530 aa16.94■□□□□ 0.3
USH1C-203ENST00000526181 PUS3Q9BZE2 481 aaKnown RBP16.94■□□□□ 0.3
USH1C-203ENST00000526181 COA1Q9GZY4 146 aa16.94■□□□□ 0.3
USH1C-203ENST00000526181 ZNF609O15014 1411 aa16.94■□□□□ 0.3
USH1C-203ENST00000526181 ZNF646O15015 1829 aaPredicted RBP16.93■□□□□ 0.3
USH1C-203ENST00000526181 CNTNAP1P78357 1384 aa16.93■□□□□ 0.3
USH1C-203ENST00000526181 RABL6Q3YEC7 729 aaPredicted RBP16.93■□□□□ 0.3
USH1C-203ENST00000526181 CST9Q5W186 159 aa16.93■□□□□ 0.3
USH1C-203ENST00000526181 DLK2Q6UY11 383 aa16.93■□□□□ 0.3
USH1C-203ENST00000526181 FBXW7Q969H0 707 aa16.93■□□□□ 0.3
USH1C-203ENST00000526181 GMLQ99445 158 aa16.93■□□□□ 0.3
USH1C-203ENST00000526181 CNNM1Q9NRU3 951 aa16.93■□□□□ 0.3
USH1C-203ENST00000526181 PSME4Q14997 1843 aa16.93■□□□□ 0.3
USH1C-203ENST00000526181 ASTN2O75129 1339 aaPredicted RBP16.93■□□□□ 0.3
USH1C-203ENST00000526181 PLIN1O60240 522 aa16.92■□□□□ 0.3
USH1C-203ENST00000526181 KIF4BQ2VIQ3 1234 aa16.92■□□□□ 0.3
USH1C-203ENST00000526181 DACT2Q5SW24 774 aa16.92■□□□□ 0.3
USH1C-203ENST00000526181 AGBL3Q8NEM8 1001 aa16.92■□□□□ 0.3
USH1C-203ENST00000526181 ZC3H15Q8WU90 426 aaKnown RBP16.92■□□□□ 0.3
USH1C-203ENST00000526181 BRPF1P55201 1214 aaPredicted RBP16.91■□□□□ 0.3
USH1C-203ENST00000526181 ZNF280AP59817 542 aaPredicted RBP16.91■□□□□ 0.3
USH1C-203ENST00000526181 ABT1Q9ULW3 272 aaKnown RBP16.91■□□□□ 0.3
USH1C-203ENST00000526181 USP17L8P0C7I0 530 aa16.9■□□□□ 0.3
USH1C-203ENST00000526181 USP48Q86UV5 1035 aa16.9■□□□□ 0.3
USH1C-203ENST00000526181 KLHDC4Q8TBB5 520 aa16.9■□□□□ 0.3
USH1C-203ENST00000526181 API5Q9BZZ5 524 aaKnown RBP16.9■□□□□ 0.3
USH1C-203ENST00000526181 CD209Q9NNX6 404 aa16.9■□□□□ 0.3
USH1C-203ENST00000526181 RASSF10A6NK89 507 aa16.89■□□□□ 0.29
USH1C-203ENST00000526181 ADM5C9JUS6 153 aa16.89■□□□□ 0.29
USH1C-203ENST00000526181 BCAR3O75815 825 aa16.89■□□□□ 0.29
USH1C-203ENST00000526181 VEGFBP49765 207 aa16.89■□□□□ 0.29
USH1C-203ENST00000526181 GTF2IP78347 998 aa16.89■□□□□ 0.29
USH1C-203ENST00000526181 LRRC24Q50LG9 513 aa16.89■□□□□ 0.29
USH1C-203ENST00000526181 STRIP1Q5VSL9 837 aa16.89■□□□□ 0.29
USH1C-203ENST00000526181 C15orf52Q6ZUT6 534 aaKnown RBP16.89■□□□□ 0.29
USH1C-203ENST00000526181 CDC37L1Q7L3B6 337 aa16.89■□□□□ 0.29
USH1C-203ENST00000526181 ZNF408Q9H9D4 720 aa16.89■□□□□ 0.29
USH1C-203ENST00000526181 GGA3Q9NZ52 723 aa16.89■□□□□ 0.29
USH1C-203ENST00000526181 TNNQ9UQP3 1299 aa16.89■□□□□ 0.29
USH1C-203ENST00000526181 CELF2O95319 508 aaKnown RBP16.88■□□□□ 0.29
USH1C-203ENST00000526181 MYOZ2Q9NPC6 264 aa16.88■□□□□ 0.29
USH1C-203ENST00000526181 RIPOR2Q9Y4F9 1068 aa16.88■□□□□ 0.29
USH1C-203ENST00000526181 KIF16BQ96L93 1317 aa16.88■□□□□ 0.29
USH1C-203ENST00000526181 SCARF1Q14162 830 aa16.87■□□□□ 0.29
USH1C-203ENST00000526181 DEFB115Q30KQ5 88 aa16.87■□□□□ 0.29
USH1C-203ENST00000526181 TTLL5Q6EMB2 1281 aa16.87■□□□□ 0.29
USH1C-203ENST00000526181 KRT26Q7Z3Y9 468 aa16.87■□□□□ 0.29
USH1C-203ENST00000526181 DCPSQ96C86 337 aaKnown RBP16.87■□□□□ 0.29
USH1C-203ENST00000526181 UBTFL1P0CB47 393 aaPredicted RBP16.86■□□□□ 0.29
USH1C-203ENST00000526181 HSPA1AP0DMV8 641 aaKnown RBP16.86■□□□□ 0.29
USH1C-203ENST00000526181 HSPA1BP0DMV9 641 aaKnown RBP16.86■□□□□ 0.29
USH1C-203ENST00000526181 RFX5P48382 616 aaPredicted RBP16.86■□□□□ 0.29
USH1C-203ENST00000526181 ANGEL2Q5VTE6 544 aaKnown RBP16.86■□□□□ 0.29
USH1C-203ENST00000526181 ZNF804AQ7Z570 1209 aa16.86■□□□□ 0.29
USH1C-203ENST00000526181 CERS5Q8N5B7 392 aa16.86■□□□□ 0.29
USH1C-203ENST00000526181 FRAT1Q92837 279 aaPredicted RBP16.86■□□□□ 0.29
USH1C-203ENST00000526181 SCAF8Q9UPN6 1271 aaKnown RBP16.86■□□□□ 0.29
USH1C-203ENST00000526181 JAG2Q9Y219 1238 aa16.86■□□□□ 0.29
USH1C-203ENST00000526181 TLL2Q9Y6L7 1015 aa16.86■□□□□ 0.29
USH1C-203ENST00000526181 MROH5Q6ZUA9 1318 aa16.86■□□□□ 0.29
USH1C-203ENST00000526181 MYO3BQ8WXR4 1341 aa16.86■□□□□ 0.29
USH1C-203ENST00000526181 IL1R1P14778 569 aa16.85■□□□□ 0.29
USH1C-203ENST00000526181 GYG1P46976 350 aa16.85■□□□□ 0.29
USH1C-203ENST00000526181 KIAA0825Q8IV33 1275 aa16.85■□□□□ 0.29
USH1C-203ENST00000526181 ARHGAP45Q92619 1136 aa16.85■□□□□ 0.29
USH1C-203ENST00000526181 MEIS3Q99687 375 aa16.85■□□□□ 0.29
USH1C-203ENST00000526181 TRPM7Q96QT4 1865 aa16.84■□□□□ 0.29
USH1C-203ENST00000526181 SASH1O94885 1247 aa16.84■□□□□ 0.29
USH1C-203ENST00000526181 TRIM27P14373 513 aa16.84■□□□□ 0.29
USH1C-203ENST00000526181 GRM1Q13255 1194 aa16.84■□□□□ 0.29
USH1C-203ENST00000526181 UBE4AQ14139 1066 aa16.84■□□□□ 0.29
USH1C-203ENST00000526181 NBPF9Q3BBW0 867 aa16.84■□□□□ 0.29
USH1C-203ENST00000526181 METTL24Q5JXM2 366 aa16.84■□□□□ 0.29
USH1C-203ENST00000526181 INTS3Q68E01 1043 aaKnown RBP16.84■□□□□ 0.29
USH1C-203ENST00000526181 CYP4F22Q6NT55 531 aa16.84■□□□□ 0.29
USH1C-203ENST00000526181 PAXIP1Q6ZW49 1069 aaPredicted RBP16.84■□□□□ 0.29
USH1C-203ENST00000526181 VGLL2Q8N8G2 317 aa16.84■□□□□ 0.29
USH1C-203ENST00000526181 LRRFIP2Q9Y608 721 aaKnown RBP16.84■□□□□ 0.29
USH1C-203ENST00000526181 WDR33Q9C0J8 1336 aaKnown RBP16.84■□□□□ 0.29
USH1C-203ENST00000526181 ZBED9Q6R2W3 1325 aa16.83■□□□□ 0.28
USH1C-203ENST00000526181 SAPCD2Q86UD0 394 aa16.83■□□□□ 0.28
USH1C-203ENST00000526181 SULF1Q8IWU6 871 aa16.83■□□□□ 0.28
USH1C-203ENST00000526181 CLUAP1Q96AJ1 413 aa16.83■□□□□ 0.28
USH1C-203ENST00000526181 PTPN12Q05209 780 aaKnown RBP16.82■□□□□ 0.28
USH1C-203ENST00000526181 ATF7IPQ6VMQ6 1270 aa16.82■□□□□ 0.28
USH1C-203ENST00000526181 OGFOD1Q8N543 542 aa16.82■□□□□ 0.28
USH1C-203ENST00000526181 CDCA5Q96FF9 252 aa16.82■□□□□ 0.28
USH1C-203ENST00000526181 FAM84BQ96KN1 310 aaPredicted RBP16.82■□□□□ 0.28
USH1C-203ENST00000526181 CAPNS2Q96L46 248 aa16.82■□□□□ 0.28
USH1C-203ENST00000526181 THSD7BQ9C0I4 1608 aa16.81■□□□□ 0.28
USH1C-203ENST00000526181 F8W031 263 aaPredicted RBP16.81■□□□□ 0.28
USH1C-203ENST00000526181 EYA2O00167 538 aa16.81■□□□□ 0.28
USH1C-203ENST00000526181 WNT10BO00744 389 aa16.81■□□□□ 0.28
USH1C-203ENST00000526181 PDE8BO95263 885 aa16.81■□□□□ 0.28
USH1C-203ENST00000526181 HIBADHP31937 336 aaKnown RBP16.81■□□□□ 0.28
USH1C-203ENST00000526181 TDRD7Q8NHU6 1098 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms