RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 USP17L3A6NCW0 530 aa21.39■■□□□ 1.01
CCS-203ENST00000526058 USP17L4A6NCW7 530 aa21.39■■□□□ 1.01
CCS-203ENST00000526058 PLIN1O60240 522 aa21.39■■□□□ 1.01
CCS-203ENST00000526058 TBC1D10BQ4KMP7 808 aaPredicted RBP21.39■■□□□ 1.01
CCS-203ENST00000526058 RBM26Q5T8P6 1007 aaKnown RBP21.39■■□□□ 1.01
CCS-203ENST00000526058 USP17L1Q7RTZ2 530 aa21.39■■□□□ 1.01
CCS-203ENST00000526058 COA1Q9GZY4 146 aa21.39■■□□□ 1.01
CCS-203ENST00000526058 PGAP2Q9UHJ9 254 aa21.39■■□□□ 1.01
CCS-203ENST00000526058 IRS2Q9Y4H2 1338 aa21.38■■□□□ 1.01
CCS-203ENST00000526058 POLR2AP24928 1970 aaKnown RBP21.38■■□□□ 1.01
CCS-203ENST00000526058 TMEM88BA6NKF7 163 aa21.38■■□□□ 1.01
CCS-203ENST00000526058 TRAF5O00463 557 aa21.38■■□□□ 1.01
CCS-203ENST00000526058 BCAR3O75815 825 aa21.38■■□□□ 1.01
CCS-203ENST00000526058 MXD3Q9BW11 206 aa21.38■■□□□ 1.01
CCS-203ENST00000526058 KIF16BQ96L93 1317 aa21.37■■□□□ 1.01
CCS-203ENST00000526058 AGBL3Q8NEM8 1001 aa21.37■■□□□ 1.01
CCS-203ENST00000526058 ZC3H15Q8WU90 426 aaKnown RBP21.37■■□□□ 1.01
CCS-203ENST00000526058 ARHGAP45Q92619 1136 aa21.37■■□□□ 1.01
CCS-203ENST00000526058 GMLQ99445 158 aa21.37■■□□□ 1.01
CCS-203ENST00000526058 TRPM7Q96QT4 1865 aa21.37■■□□□ 1.01
CCS-203ENST00000526058 FBXW7Q969H0 707 aa21.36■■□□□ 1.01
CCS-203ENST00000526058 GLIS2Q9BZE0 524 aaPredicted RBP21.36■■□□□ 1.01
CCS-203ENST00000526058 MKRN1Q9UHC7 482 aaKnown RBP21.36■■□□□ 1.01
CCS-203ENST00000526058 ZNF609O15014 1411 aa21.36■■□□□ 1.01
CCS-203ENST00000526058 ZBED9Q6R2W3 1325 aa21.35■■□□□ 1.01
CCS-203ENST00000526058 DACT2Q5SW24 774 aa21.35■■□□□ 1.01
CCS-203ENST00000526058 IFFO2Q5TF58 517 aa21.35■■□□□ 1.01
CCS-203ENST00000526058 C15orf52Q6ZUT6 534 aaKnown RBP21.35■■□□□ 1.01
CCS-203ENST00000526058 JMYQ8N9B5 988 aa21.35■■□□□ 1.01
CCS-203ENST00000526058 KLHDC4Q8TBB5 520 aa21.35■■□□□ 1.01
CCS-203ENST00000526058 TNNQ9UQP3 1299 aa21.35■■□□□ 1.01
CCS-203ENST00000526058 RIPOR2Q9Y4F9 1068 aa21.35■■□□□ 1.01
CCS-203ENST00000526058 UBTFL1P0CB47 393 aaPredicted RBP21.34■■□□□ 1.01
CCS-203ENST00000526058 ZNF280AP59817 542 aaPredicted RBP21.34■■□□□ 1.01
CCS-203ENST00000526058 KIF4BQ2VIQ3 1234 aa21.34■■□□□ 1.01
CCS-203ENST00000526058 LRRC24Q50LG9 513 aa21.34■■□□□ 1.01
CCS-203ENST00000526058 STRIP1Q5VSL9 837 aa21.34■■□□□ 1.01
CCS-203ENST00000526058 FRAT1Q92837 279 aaPredicted RBP21.34■■□□□ 1.01
CCS-203ENST00000526058 CD209Q9NNX6 404 aa21.34■■□□□ 1.01
CCS-203ENST00000526058 USP17L8P0C7I0 530 aa21.33■■□□□ 1.01
CCS-203ENST00000526058 TTLL5Q6EMB2 1281 aa21.33■■□□□ 1.01
CCS-203ENST00000526058 TRIM27P14373 513 aa21.32■■□□□ 1
CCS-203ENST00000526058 GTF2IP78347 998 aa21.32■■□□□ 1
CCS-203ENST00000526058 CST9Q5W186 159 aa21.32■■□□□ 1
CCS-203ENST00000526058 INTS3Q68E01 1043 aaKnown RBP21.32■■□□□ 1
CCS-203ENST00000526058 DLK2Q6UY11 383 aa21.32■■□□□ 1
CCS-203ENST00000526058 MEIS3Q99687 375 aa21.32■■□□□ 1
CCS-203ENST00000526058 ASTN2O75129 1339 aaPredicted RBP21.31■■□□□ 1
CCS-203ENST00000526058 MROH5Q6ZUA9 1318 aa21.31■■□□□ 1
CCS-203ENST00000526058 IPO8O15397 1037 aaKnown RBP21.31■■□□□ 1
CCS-203ENST00000526058 RFX5P48382 616 aaPredicted RBP21.31■■□□□ 1
CCS-203ENST00000526058 UBE4AQ14139 1066 aa21.31■■□□□ 1
CCS-203ENST00000526058 ATF7IPQ6VMQ6 1270 aa21.31■■□□□ 1
CCS-203ENST00000526058 CDC37L1Q7L3B6 337 aa21.31■■□□□ 1
CCS-203ENST00000526058 ZNF804AQ7Z570 1209 aa21.31■■□□□ 1
CCS-203ENST00000526058 USP48Q86UV5 1035 aa21.31■■□□□ 1
CCS-203ENST00000526058 LRRFIP2Q9Y608 721 aaKnown RBP21.31■■□□□ 1
CCS-203ENST00000526058 CNTNAP1P78357 1384 aa21.31■■□□□ 1
CCS-203ENST00000526058 IL1R1P14778 569 aa21.3■■□□□ 1
CCS-203ENST00000526058 CLUAP1Q96AJ1 413 aa21.3■■□□□ 1
CCS-203ENST00000526058 MYOZ2Q9NPC6 264 aa21.3■■□□□ 1
CCS-203ENST00000526058 ABT1Q9ULW3 272 aaKnown RBP21.3■■□□□ 1
CCS-203ENST00000526058 SCARF1Q14162 830 aa21.29■■□□□ 1
CCS-203ENST00000526058 METTL24Q5JXM2 366 aa21.29■■□□□ 1
CCS-203ENST00000526058 MYO3BQ8WXR4 1341 aa21.29■■□□□ 1
CCS-203ENST00000526058 CELF2O95319 508 aaKnown RBP21.28■■□□□ 1
CCS-203ENST00000526058 GYG1P46976 350 aa21.28■■□□□ 1
CCS-203ENST00000526058 PTPN12Q05209 780 aaKnown RBP21.28■■□□□ 1
CCS-203ENST00000526058 KRT26Q7Z3Y9 468 aa21.28■■□□□ 1
CCS-203ENST00000526058 VGLL2Q8N8G2 317 aa21.28■■□□□ 1
CCS-203ENST00000526058 DCPSQ96C86 337 aaKnown RBP21.28■■□□□ 1
CCS-203ENST00000526058 GGA3Q9NZ52 723 aa21.28■■□□□ 1
CCS-203ENST00000526058 JAG2Q9Y219 1238 aa21.28■■□□□ 1
CCS-203ENST00000526058 RASSF10A6NK89 507 aa21.27■■□□□ 1
CCS-203ENST00000526058 VEGFBP49765 207 aa21.27■■□□□ 1
CCS-203ENST00000526058 DEFB115Q30KQ5 88 aa21.27■■□□□ 1
CCS-203ENST00000526058 KIAA0825Q8IV33 1275 aa21.27■■□□□ 1
CCS-203ENST00000526058 CERS5Q8N5B7 392 aa21.27■■□□□ 1
CCS-203ENST00000526058 FAM84BQ96KN1 310 aaPredicted RBP21.27■■□□□ 1
CCS-203ENST00000526058 ZNF408Q9H9D4 720 aa21.27■■□□□ 1
CCS-203ENST00000526058 ADM5C9JUS6 153 aa21.26■□□□□ 0.99
CCS-203ENST00000526058 EYA2O00167 538 aa21.26■□□□□ 0.99
CCS-203ENST00000526058 PDE8BO95263 885 aa21.26■□□□□ 0.99
CCS-203ENST00000526058 NBPF9Q3BBW0 867 aa21.26■□□□□ 0.99
CCS-203ENST00000526058 ANGEL2Q5VTE6 544 aaKnown RBP21.26■□□□□ 0.99
CCS-203ENST00000526058 ZKSCAN2Q63HK3 967 aa21.26■□□□□ 0.99
CCS-203ENST00000526058 OGFOD1Q8N543 542 aa21.26■□□□□ 0.99
CCS-203ENST00000526058 HIBADHP31937 336 aaKnown RBP21.25■□□□□ 0.99
CCS-203ENST00000526058 ATG9AQ7Z3C6 839 aa21.25■□□□□ 0.99
CCS-203ENST00000526058 HDAC5Q9UQL6 1122 aa21.25■□□□□ 0.99
CCS-203ENST00000526058 TLL2Q9Y6L7 1015 aa21.25■□□□□ 0.99
CCS-203ENST00000526058 GNAI3P08754 354 aa21.24■□□□□ 0.99
CCS-203ENST00000526058 TMEM57Q8N5G2 664 aa21.24■□□□□ 0.99
CCS-203ENST00000526058 TDRD7Q8NHU6 1098 aaKnown RBP21.24■□□□□ 0.99
CCS-203ENST00000526058 SIL1Q9H173 461 aa21.24■□□□□ 0.99
CCS-203ENST00000526058 SASH1O94885 1247 aa21.23■□□□□ 0.99
CCS-203ENST00000526058 FBXO33Q7Z6M2 555 aa21.23■□□□□ 0.99
CCS-203ENST00000526058 SULF1Q8IWU6 871 aa21.23■□□□□ 0.99
CCS-203ENST00000526058 SCAF8Q9UPN6 1271 aaKnown RBP21.23■□□□□ 0.99
CCS-203ENST00000526058 PA2G4Q9UQ80 394 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms