RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 FAM26DQ5JW98 314 aa7.63□□□□□ -1.19
CSDE1-211ENST00000525970 ABTB2Q8N961 1025 aa7.63□□□□□ -1.19
CSDE1-211ENST00000525970 CEP41Q9BYV8 373 aa7.63□□□□□ -1.19
CSDE1-211ENST00000525970 PCMTD2Q9NV79 361 aa7.63□□□□□ -1.19
CSDE1-211ENST00000525970 RAXQ9Y2V3 346 aa7.63□□□□□ -1.19
CSDE1-211ENST00000525970 STIM2Q9P246 746 aa7.62□□□□□ -1.19
CSDE1-211ENST00000525970 CD68P34810 354 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-211ENST00000525970 UVSSAQ2YD98 709 aa7.61□□□□□ -1.19
CSDE1-211ENST00000525970 COL13A1Q5TAT6 717 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-211ENST00000525970 CEP135Q66GS9 1140 aa7.61□□□□□ -1.19
CSDE1-211ENST00000525970 FAM117BQ6P1L5 589 aa7.61□□□□□ -1.19
CSDE1-211ENST00000525970 AGGF1Q8N302 714 aaeCLIP7.61□□□□□ -1.19
CSDE1-211ENST00000525970 KLHL23Q8NBE8 558 aa7.61□□□□□ -1.19
CSDE1-211ENST00000525970 GALNT11Q8NCW6 608 aa7.61□□□□□ -1.19
CSDE1-211ENST00000525970 GTF3C2Q8WUA4 911 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-211ENST00000525970 KRTAP4-12Q9BQ66 201 aa7.61□□□□□ -1.19
CSDE1-211ENST00000525970 ABI2Q9NYB9 513 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-211ENST00000525970 E9PSI1 815 aa7.6□□□□□ -1.19
CSDE1-211ENST00000525970 LINC01387J3KSC0 135 aa7.6□□□□□ -1.19
CSDE1-211ENST00000525970 DHX15O43143 795 aaKnown RBP7.6□□□□□ -1.19
CSDE1-211ENST00000525970 ABL1P00519 1130 aa7.6□□□□□ -1.19
CSDE1-211ENST00000525970 IGLV1-40P01703 118 aa7.6□□□□□ -1.19
CSDE1-211ENST00000525970 CD97P48960 835 aa7.6□□□□□ -1.19
CSDE1-211ENST00000525970 ATP11AP98196 1134 aa7.6□□□□□ -1.19
CSDE1-211ENST00000525970 PDE12Q6L8Q7 609 aaKnown RBP7.6□□□□□ -1.19
CSDE1-211ENST00000525970 CCER1Q8TC90 406 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-211ENST00000525970 UBL7Q96S82 380 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-211ENST00000525970 PBX4Q9BYU1 374 aa7.6□□□□□ -1.19
CSDE1-211ENST00000525970 LACRTQ9GZZ8 138 aa7.6□□□□□ -1.19
CSDE1-211ENST00000525970 STOML1Q9UBI4 398 aa7.6□□□□□ -1.19
CSDE1-211ENST00000525970 ACAD11Q709F0 780 aa7.59□□□□□ -1.19
CSDE1-211ENST00000525970 GPR152Q8TDT2 470 aa7.59□□□□□ -1.19
CSDE1-211ENST00000525970 RASSF4Q9H2L5 321 aa7.59□□□□□ -1.19
CSDE1-211ENST00000525970 FAM177BA6PVY3 158 aa7.58□□□□□ -1.2
CSDE1-211ENST00000525970 TM4SF5O14894 197 aa7.58□□□□□ -1.2
CSDE1-211ENST00000525970 RPLP1P05386 114 aaKnown RBP7.58□□□□□ -1.2
CSDE1-211ENST00000525970 PTPRAP18433 802 aa7.58□□□□□ -1.2
CSDE1-211ENST00000525970 SSTR4P31391 388 aa7.58□□□□□ -1.2
CSDE1-211ENST00000525970 MCTP1Q6DN14 999 aa7.58□□□□□ -1.2
CSDE1-211ENST00000525970 DNAJC14Q6Y2X3 702 aaPredicted RBP7.58□□□□□ -1.2
CSDE1-211ENST00000525970 CEP120Q8N960 986 aa7.58□□□□□ -1.2
CSDE1-211ENST00000525970 HELQQ8TDG4 1101 aa7.58□□□□□ -1.2
CSDE1-211ENST00000525970 KIAA1324LA8MWY0 1029 aaPredicted RBP7.57□□□□□ -1.2
CSDE1-211ENST00000525970 FSCN2O14926 492 aa7.57□□□□□ -1.2
CSDE1-211ENST00000525970 COBLO75128 1261 aa7.57□□□□□ -1.2
CSDE1-211ENST00000525970 WISP1O95388 367 aa7.57□□□□□ -1.2
CSDE1-211ENST00000525970 MTMR3Q13615 1198 aa7.57□□□□□ -1.2
CSDE1-211ENST00000525970 NCAPG2Q86XI2 1143 aa7.57□□□□□ -1.2
CSDE1-211ENST00000525970 KRTAP1-3Q8IUG1 177 aa7.57□□□□□ -1.2
CSDE1-211ENST00000525970 ARMC10Q8N2F6 343 aa7.57□□□□□ -1.2
CSDE1-211ENST00000525970 WNT8BQ93098 351 aa7.57□□□□□ -1.2
CSDE1-211ENST00000525970 FAM46AQ96IP4 442 aaKnown RBP7.57□□□□□ -1.2
CSDE1-211ENST00000525970 ADAM19Q9H013 955 aa7.57□□□□□ -1.2
CSDE1-211ENST00000525970 ANO2Q9NQ90 1003 aa7.57□□□□□ -1.2
CSDE1-211ENST00000525970 RBM47A0AV96 593 aaKnown RBP7.56□□□□□ -1.2
CSDE1-211ENST00000525970 ZBTB39O15060 712 aa7.56□□□□□ -1.2
CSDE1-211ENST00000525970 DUOXA2Q1HG44 320 aa7.56□□□□□ -1.2
CSDE1-211ENST00000525970 NOM1Q5C9Z4 860 aaKnown RBP7.56□□□□□ -1.2
CSDE1-211ENST00000525970 TXNDC11Q6PKC3 985 aa7.56□□□□□ -1.2
CSDE1-211ENST00000525970 KIAA1211Q6ZU35 1233 aa7.56□□□□□ -1.2
CSDE1-211ENST00000525970 UTP4Q969X6 686 aaKnown RBP7.56□□□□□ -1.2
CSDE1-211ENST00000525970 ELP3Q9H9T3 547 aa7.56□□□□□ -1.2
CSDE1-211ENST00000525970 SEC31BQ9NQW1 1179 aa7.56□□□□□ -1.2
CSDE1-211ENST00000525970 KCNK4Q9NYG8 393 aa7.56□□□□□ -1.2
CSDE1-211ENST00000525970 COL17A1Q9UMD9 1497 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-211ENST00000525970 SOWAHDA6NJG2 315 aa7.55□□□□□ -1.2
CSDE1-211ENST00000525970 UNCXA6NJT0 531 aa7.55□□□□□ -1.2
CSDE1-211ENST00000525970 EPHA1P21709 976 aa7.55□□□□□ -1.2
CSDE1-211ENST00000525970 ZNF211Q13398 564 aaPredicted RBP7.55□□□□□ -1.2
CSDE1-211ENST00000525970 AAMPQ13685 434 aa7.55□□□□□ -1.2
CSDE1-211ENST00000525970 OSGEPQ9NPF4 335 aa7.55□□□□□ -1.2
CSDE1-211ENST00000525970 H3BRJ5 948 aa7.54□□□□□ -1.2
CSDE1-211ENST00000525970 CYP2E1P05181 493 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-211ENST00000525970 MPSTP25325 297 aa7.54□□□□□ -1.2
CSDE1-211ENST00000525970 SERPINB4P48594 390 aa7.54□□□□□ -1.2
CSDE1-211ENST00000525970 CABP4P57796 275 aa7.54□□□□□ -1.2
CSDE1-211ENST00000525970 PIP4K2BP78356 416 aa7.54□□□□□ -1.2
CSDE1-211ENST00000525970 FKBP4Q02790 459 aaKnown RBP eCLIP7.54□□□□□ -1.2
CSDE1-211ENST00000525970 NFIAQ12857 509 aa7.54□□□□□ -1.2
CSDE1-211ENST00000525970 LCE3BQ5TA77 95 aa7.54□□□□□ -1.2
CSDE1-211ENST00000525970 RNF43Q68DV7 783 aa7.54□□□□□ -1.2
CSDE1-211ENST00000525970 INTS5Q6P9B9 1019 aaKnown RBP7.54□□□□□ -1.2
CSDE1-211ENST00000525970 XKR5Q6UX68 686 aa7.54□□□□□ -1.2
CSDE1-211ENST00000525970 ZDHHC13Q8IUH4 622 aa7.54□□□□□ -1.2
CSDE1-211ENST00000525970 NUDT16Q96DE0 195 aaKnown RBP7.54□□□□□ -1.2
CSDE1-211ENST00000525970 MYRFLQ96LU7 910 aa7.54□□□□□ -1.2
CSDE1-211ENST00000525970 POP1Q99575 1024 aaKnown RBP7.54□□□□□ -1.2
CSDE1-211ENST00000525970 CARD10Q9BWT7 1032 aa7.54□□□□□ -1.2
CSDE1-211ENST00000525970 FAM13AO94988 1023 aa7.53□□□□□ -1.2
CSDE1-211ENST00000525970 ERCC3P19447 782 aa7.53□□□□□ -1.2
CSDE1-211ENST00000525970 GRIK1P39086 918 aa7.53□□□□□ -1.2
CSDE1-211ENST00000525970 SF3B2Q13435 895 aaKnown RBP7.53□□□□□ -1.2
CSDE1-211ENST00000525970 ANKRD34AQ69YU3 496 aa7.53□□□□□ -1.2
CSDE1-211ENST00000525970 ADAMTSL4Q6UY14 1074 aa7.53□□□□□ -1.2
CSDE1-211ENST00000525970 ZNF438Q7Z4V0 828 aa7.53□□□□□ -1.2
CSDE1-211ENST00000525970 ATCAYQ86WG3 371 aa7.53□□□□□ -1.2
CSDE1-211ENST00000525970 DBNDD2Q9BQY9 259 aa7.53□□□□□ -1.2
CSDE1-211ENST00000525970 C7orf69Q9H7B7 122 aa7.53□□□□□ -1.2
CSDE1-211ENST00000525970 SH2B1Q9NRF2 756 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-211ENST00000525970 IGSF5Q9NSI5 407 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms