RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 ATP2B4P23634 1241 aa16.21■□□□□ 0.19
CCDC90B-205ENST00000525916 NF2P35240 595 aa16.21■□□□□ 0.19
CCDC90B-205ENST00000525916 PTPN12Q05209 780 aaKnown RBP16.21■□□□□ 0.19
CCDC90B-205ENST00000525916 PRKG1Q13976 671 aa16.21■□□□□ 0.19
CCDC90B-205ENST00000525916 DUSP27Q5VZP5 1158 aa16.21■□□□□ 0.19
CCDC90B-205ENST00000525916 ANKRD18AQ8IVF6 992 aa16.21■□□□□ 0.19
CCDC90B-205ENST00000525916 FBXW7Q969H0 707 aa16.21■□□□□ 0.19
CCDC90B-205ENST00000525916 CFHR5Q9BXR6 569 aa16.21■□□□□ 0.19
CCDC90B-205ENST00000525916 ZNF316A6NFI3 1004 aaPredicted RBP16.2■□□□□ 0.18
CCDC90B-205ENST00000525916 PCCAP05165 728 aaPredicted RBP16.2■□□□□ 0.18
CCDC90B-205ENST00000525916 HSP90B1P14625 803 aaKnown RBP16.2■□□□□ 0.18
CCDC90B-205ENST00000525916 GOLGA2Q08379 1002 aa16.2■□□□□ 0.18
CCDC90B-205ENST00000525916 HABP4Q5JVS0 413 aaKnown RBP16.2■□□□□ 0.18
CCDC90B-205ENST00000525916 PHAXQ9H814 394 aaKnown RBP16.2■□□□□ 0.18
CCDC90B-205ENST00000525916 MED23Q9ULK4 1368 aa16.2■□□□□ 0.18
CCDC90B-205ENST00000525916 A0A1B0GUL6 1792 aa16.2■□□□□ 0.18
CCDC90B-205ENST00000525916 OTOFQ9HC10 1997 aa16.2■□□□□ 0.18
CCDC90B-205ENST00000525916 POTEFA5A3E0 1075 aa16.19■□□□□ 0.18
CCDC90B-205ENST00000525916 DACT2Q5SW24 774 aa16.19■□□□□ 0.18
CCDC90B-205ENST00000525916 ARMC9Q7Z3E5 817 aa16.19■□□□□ 0.18
CCDC90B-205ENST00000525916 FZD1Q9UP38 647 aa16.19■□□□□ 0.18
CCDC90B-205ENST00000525916 TRIM17Q9Y577 477 aa16.19■□□□□ 0.18
CCDC90B-205ENST00000525916 SPRYD7Q5W111 196 aa16.18■□□□□ 0.18
CCDC90B-205ENST00000525916 OGFOD1Q8N543 542 aa16.18■□□□□ 0.18
CCDC90B-205ENST00000525916 CCDC191Q8NCU4 936 aa16.18■□□□□ 0.18
CCDC90B-205ENST00000525916 CWC25Q9NXE8 425 aaPredicted RBP16.17■□□□□ 0.18
CCDC90B-205ENST00000525916 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.17■□□□□ 0.18
CCDC90B-205ENST00000525916 ANGEL1Q9UNK9 670 aaKnown RBP16.17■□□□□ 0.18
CCDC90B-205ENST00000525916 MYO3BQ8WXR4 1341 aa16.17■□□□□ 0.18
CCDC90B-205ENST00000525916 CTSWP56202 376 aa16.16■□□□□ 0.18
CCDC90B-205ENST00000525916 LDLRAD1Q5T700 205 aa16.16■□□□□ 0.18
CCDC90B-205ENST00000525916 OTOP1Q7RTM1 612 aa16.16■□□□□ 0.18
CCDC90B-205ENST00000525916 APOBEC3FQ8IUX4 373 aaKnown RBP16.16■□□□□ 0.18
CCDC90B-205ENST00000525916 CDC5LQ99459 802 aaKnown RBP16.16■□□□□ 0.18
CCDC90B-205ENST00000525916 MBIPQ9NS73 344 aa16.16■□□□□ 0.18
CCDC90B-205ENST00000525916 SSC5DA1L4H1 1573 aa16.16■□□□□ 0.18
CCDC90B-205ENST00000525916 ALDH1A1P00352 501 aa16.15■□□□□ 0.18
CCDC90B-205ENST00000525916 CCT4P50991 539 aaKnown RBP16.15■□□□□ 0.18
CCDC90B-205ENST00000525916 STRIP1Q5VSL9 837 aa16.15■□□□□ 0.18
CCDC90B-205ENST00000525916 TXNRD3Q86VQ6 643 aa16.15■□□□□ 0.18
CCDC90B-205ENST00000525916 IFNL1Q8IU54 200 aa16.15■□□□□ 0.18
CCDC90B-205ENST00000525916 MINPP1Q9UNW1 487 aa16.15■□□□□ 0.18
CCDC90B-205ENST00000525916 COL1A1P02452 1464 aaPredicted RBP16.15■□□□□ 0.18
CCDC90B-205ENST00000525916 KIAA0825Q8IV33 1275 aa16.14■□□□□ 0.17
CCDC90B-205ENST00000525916 RUNDC1Q96C34 613 aa16.14■□□□□ 0.17
CCDC90B-205ENST00000525916 COA1Q9GZY4 146 aa16.14■□□□□ 0.17
CCDC90B-205ENST00000525916 MANSC4A6NHS7 340 aaPredicted RBP16.13■□□□□ 0.17
CCDC90B-205ENST00000525916 IGF2BP3O00425 579 aaKnown RBP eCLIP16.13■□□□□ 0.17
CCDC90B-205ENST00000525916 ELL2O00472 640 aaPredicted RBP16.13■□□□□ 0.17
CCDC90B-205ENST00000525916 INTS3Q68E01 1043 aaKnown RBP16.13■□□□□ 0.17
CCDC90B-205ENST00000525916 ZBED3Q96IU2 234 aaPredicted RBP16.13■□□□□ 0.17
CCDC90B-205ENST00000525916 CLMNQ96JQ2 1002 aa16.13■□□□□ 0.17
CCDC90B-205ENST00000525916 METTL22Q9BUU2 404 aaPredicted RBP16.13■□□□□ 0.17
CCDC90B-205ENST00000525916 GREM2Q9H772 168 aa16.13■□□□□ 0.17
CCDC90B-205ENST00000525916 BSDC1Q9NW68 430 aaPredicted RBP16.13■□□□□ 0.17
CCDC90B-205ENST00000525916 ZSWIM8A7E2V4 1837 aa16.12■□□□□ 0.17
CCDC90B-205ENST00000525916 KLRK1P26718 216 aa16.12■□□□□ 0.17
CCDC90B-205ENST00000525916 DDX10Q13206 875 aaKnown RBP16.12■□□□□ 0.17
CCDC90B-205ENST00000525916 TTLL5Q6EMB2 1281 aa16.12■□□□□ 0.17
CCDC90B-205ENST00000525916 TTLL11Q8NHH1 800 aa16.12■□□□□ 0.17
CCDC90B-205ENST00000525916 CD99L2Q8TCZ2 262 aa16.12■□□□□ 0.17
CCDC90B-205ENST00000525916 SLC10A4Q96EP9 437 aa16.12■□□□□ 0.17
CCDC90B-205ENST00000525916 WNK4Q96J92 1243 aa16.12■□□□□ 0.17
CCDC90B-205ENST00000525916 FXR1P51114 621 aaKnown RBP eCLIP16.11■□□□□ 0.17
CCDC90B-205ENST00000525916 RALBP1Q15311 655 aa16.11■□□□□ 0.17
CCDC90B-205ENST00000525916 PTPN22Q9Y2R2 807 aa16.11■□□□□ 0.17
CCDC90B-205ENST00000525916 MAP3K2Q9Y2U5 619 aa16.11■□□□□ 0.17
CCDC90B-205ENST00000525916 ZBTB48P10074 688 aaPredicted RBP16.1■□□□□ 0.17
CCDC90B-205ENST00000525916 EN2P19622 333 aaPredicted RBP16.1■□□□□ 0.17
CCDC90B-205ENST00000525916 MMP14P50281 582 aa16.1■□□□□ 0.17
CCDC90B-205ENST00000525916 INHBEP58166 350 aa16.1■□□□□ 0.17
CCDC90B-205ENST00000525916 GTF2IP78347 998 aa16.1■□□□□ 0.17
CCDC90B-205ENST00000525916 CRHR2Q13324 411 aa16.1■□□□□ 0.17
CCDC90B-205ENST00000525916 MAP3K11Q16584 847 aa16.1■□□□□ 0.17
CCDC90B-205ENST00000525916 ERO1AQ96HE7 468 aa16.1■□□□□ 0.17
CCDC90B-205ENST00000525916 DEFB129Q9H1M3 183 aa16.1■□□□□ 0.17
CCDC90B-205ENST00000525916 PCDHAC2Q9Y5I4 1007 aa16.1■□□□□ 0.17
CCDC90B-205ENST00000525916 DDX58O95786 925 aaKnown RBP16.09■□□□□ 0.17
CCDC90B-205ENST00000525916 IGKV5-2P06315 115 aa16.09■□□□□ 0.17
CCDC90B-205ENST00000525916 ZNF853P0CG23 659 aa16.09■□□□□ 0.17
CCDC90B-205ENST00000525916 CAP1Q01518 475 aa16.09■□□□□ 0.17
CCDC90B-205ENST00000525916 WDR43Q15061 677 aaKnown RBP eCLIP16.09■□□□□ 0.17
CCDC90B-205ENST00000525916 LEMD3Q9Y2U8 911 aa16.09■□□□□ 0.17
CCDC90B-205ENST00000525916 ZNF804BA4D1E1 1349 aa16.09■□□□□ 0.17
CCDC90B-205ENST00000525916 GJA5P36382 358 aa16.08■□□□□ 0.16
CCDC90B-205ENST00000525916 DLGAP5Q15398 846 aa16.08■□□□□ 0.16
CCDC90B-205ENST00000525916 ARMC5Q96C12 935 aa16.08■□□□□ 0.16
CCDC90B-205ENST00000525916 EFCC1Q9HA90 598 aa16.08■□□□□ 0.16
CCDC90B-205ENST00000525916 ADAMTS8Q9UP79 889 aa16.08■□□□□ 0.16
CCDC90B-205ENST00000525916 ARAP2Q8WZ64 1704 aa16.08■□□□□ 0.16
CCDC90B-205ENST00000525916 PPP1R12BO60237 982 aaPredicted RBP16.07■□□□□ 0.16
CCDC90B-205ENST00000525916 IGHMBP2P38935 993 aaKnown RBP16.07■□□□□ 0.16
CCDC90B-205ENST00000525916 CWF19L2Q2TBE0 894 aaKnown RBP16.07■□□□□ 0.16
CCDC90B-205ENST00000525916 CERS5Q8N5B7 392 aa16.07■□□□□ 0.16
CCDC90B-205ENST00000525916 C8orf58Q8NAV2 365 aa16.07■□□□□ 0.16
CCDC90B-205ENST00000525916 MYBBP1AQ9BQG0 1328 aaKnown RBP16.07■□□□□ 0.16
CCDC90B-205ENST00000525916 CACNA1FO60840 1977 aa16.06■□□□□ 0.16
CCDC90B-205ENST00000525916 AOX1Q06278 1338 aa16.06■□□□□ 0.16
CCDC90B-205ENST00000525916 CLRN2A0PK11 232 aa16.06■□□□□ 0.16
CCDC90B-205ENST00000525916 PI4KAP2A4QPH2 592 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms