RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 HELBQ8NG08 1087 aaPredicted RBP13.23□□□□□ -0.29
RBBP4-216ENST00000525506 ZC3H15Q8WU90 426 aaKnown RBP13.23□□□□□ -0.29
RBBP4-216ENST00000525506 FBXW7Q969H0 707 aa13.23□□□□□ -0.29
RBBP4-216ENST00000525506 ZNF594Q96JF6 807 aaPredicted RBP13.23□□□□□ -0.29
RBBP4-216ENST00000525506 SMC4Q9NTJ3 1288 aa13.23□□□□□ -0.29
RBBP4-216ENST00000525506 MED23Q9ULK4 1368 aa13.22□□□□□ -0.29
RBBP4-216ENST00000525506 KIF16BQ96L93 1317 aa13.22□□□□□ -0.29
RBBP4-216ENST00000525506 USP17L3A6NCW0 530 aa13.22□□□□□ -0.29
RBBP4-216ENST00000525506 USP17L4A6NCW7 530 aa13.22□□□□□ -0.29
RBBP4-216ENST00000525506 GRM8O00222 908 aa13.22□□□□□ -0.29
RBBP4-216ENST00000525506 FOXN1O15353 648 aa13.22□□□□□ -0.29
RBBP4-216ENST00000525506 TAF5LO75529 589 aa13.22□□□□□ -0.29
RBBP4-216ENST00000525506 CHRNDQ07001 517 aa13.22□□□□□ -0.29
RBBP4-216ENST00000525506 KIF4BQ2VIQ3 1234 aa13.22□□□□□ -0.29
RBBP4-216ENST00000525506 CDC37L1Q7L3B6 337 aa13.22□□□□□ -0.29
RBBP4-216ENST00000525506 USP17L1Q7RTZ2 530 aa13.22□□□□□ -0.29
RBBP4-216ENST00000525506 CAPNS2Q96L46 248 aa13.22□□□□□ -0.29
RBBP4-216ENST00000525506 SRCIN1Q9C0H9 1055 aa13.22□□□□□ -0.29
RBBP4-216ENST00000525506 C9orf78Q9NZ63 289 aaPredicted RBP13.22□□□□□ -0.29
RBBP4-216ENST00000525506 TLL2Q9Y6L7 1015 aa13.22□□□□□ -0.29
RBBP4-216ENST00000525506 ZNF804BA4D1E1 1349 aa13.21□□□□□ -0.29
RBBP4-216ENST00000525506 UTYO14607 1347 aa13.21□□□□□ -0.29
RBBP4-216ENST00000525506 ADM5C9JUS6 153 aa13.21□□□□□ -0.29
RBBP4-216ENST00000525506 IFIT5Q13325 482 aaKnown RBP13.21□□□□□ -0.29
RBBP4-216ENST00000525506 KRT26Q7Z3Y9 468 aa13.21□□□□□ -0.29
RBBP4-216ENST00000525506 PODNQ7Z5L7 613 aa13.21□□□□□ -0.29
RBBP4-216ENST00000525506 AGBL3Q8NEM8 1001 aa13.21□□□□□ -0.29
RBBP4-216ENST00000525506 SUCLG2Q96I99 432 aa13.21□□□□□ -0.29
RBBP4-216ENST00000525506 GMLQ99445 158 aa13.21□□□□□ -0.29
RBBP4-216ENST00000525506 ANKRD2Q9GZV1 360 aa13.21□□□□□ -0.29
RBBP4-216ENST00000525506 SCAF8Q9UPN6 1271 aaKnown RBP13.21□□□□□ -0.29
RBBP4-216ENST00000525506 LEMD3Q9Y2U8 911 aa13.21□□□□□ -0.29
RBBP4-216ENST00000525506 KCNJ4P48050 445 aa13.2□□□□□ -0.3
RBBP4-216ENST00000525506 RARSP54136 660 aaKnown RBP13.2□□□□□ -0.3
RBBP4-216ENST00000525506 ZNF280AP59817 542 aaPredicted RBP13.2□□□□□ -0.3
RBBP4-216ENST00000525506 ARHGAP45Q92619 1136 aa13.2□□□□□ -0.3
RBBP4-216ENST00000525506 DCPSQ96C86 337 aaKnown RBP13.2□□□□□ -0.3
RBBP4-216ENST00000525506 KAZALD1Q96I82 304 aa13.2□□□□□ -0.3
RBBP4-216ENST00000525506 PLIN1O60240 522 aa13.19□□□□□ -0.3
RBBP4-216ENST00000525506 AOC2O75106 756 aa13.19□□□□□ -0.3
RBBP4-216ENST00000525506 NBPF7P0C2Y1 421 aaPredicted RBP13.19□□□□□ -0.3
RBBP4-216ENST00000525506 USP17L8P0C7I0 530 aa13.19□□□□□ -0.3
RBBP4-216ENST00000525506 SCARF1Q14162 830 aa13.19□□□□□ -0.3
RBBP4-216ENST00000525506 DACT2Q5SW24 774 aa13.19□□□□□ -0.3
RBBP4-216ENST00000525506 SAPCD2Q86UD0 394 aa13.19□□□□□ -0.3
RBBP4-216ENST00000525506 API5Q9BZZ5 524 aaKnown RBP13.19□□□□□ -0.3
RBBP4-216ENST00000525506 COA1Q9GZY4 146 aa13.19□□□□□ -0.3
RBBP4-216ENST00000525506 WBP1LQ9NX94 342 aa13.19□□□□□ -0.3
RBBP4-216ENST00000525506 GGA3Q9NZ52 723 aa13.19□□□□□ -0.3
RBBP4-216ENST00000525506 THSD7BQ9C0I4 1608 aa13.18□□□□□ -0.3
RBBP4-216ENST00000525506 CCDC57Q2TAC2 916 aa13.18□□□□□ -0.3
RBBP4-216ENST00000525506 TAF7LQ5H9L4 462 aa13.18□□□□□ -0.3
RBBP4-216ENST00000525506 ANGEL2Q5VTE6 544 aaKnown RBP13.18□□□□□ -0.3
RBBP4-216ENST00000525506 TTLL5Q6EMB2 1281 aa13.18□□□□□ -0.3
RBBP4-216ENST00000525506 AIDAQ96BJ3 306 aa13.18□□□□□ -0.3
RBBP4-216ENST00000525506 MYOZ2Q9NPC6 264 aa13.18□□□□□ -0.3
RBBP4-216ENST00000525506 ZNF609O15014 1411 aa13.18□□□□□ -0.3
RBBP4-216ENST00000525506 IRS2Q9Y4H2 1338 aa13.17□□□□□ -0.3
RBBP4-216ENST00000525506 ECE1P42892 770 aa13.17□□□□□ -0.3
RBBP4-216ENST00000525506 GTF2IP78347 998 aa13.17□□□□□ -0.3
RBBP4-216ENST00000525506 LDHAL6AQ6ZMR3 332 aa13.17□□□□□ -0.3
RBBP4-216ENST00000525506 TNS4Q8IZW8 715 aa13.17□□□□□ -0.3
RBBP4-216ENST00000525506 PUS3Q9BZE2 481 aaKnown RBP13.17□□□□□ -0.3
RBBP4-216ENST00000525506 CD209Q9NNX6 404 aa13.17□□□□□ -0.3
RBBP4-216ENST00000525506 CNNM1Q9NRU3 951 aa13.17□□□□□ -0.3
RBBP4-216ENST00000525506 IPO8O15397 1037 aaKnown RBP13.16□□□□□ -0.3
RBBP4-216ENST00000525506 CTCFP49711 727 aaPredicted RBP13.16□□□□□ -0.3
RBBP4-216ENST00000525506 LBX1P52954 281 aa13.16□□□□□ -0.3
RBBP4-216ENST00000525506 NBPF9Q3BBW0 867 aa13.16□□□□□ -0.3
RBBP4-216ENST00000525506 STRIP1Q5VSL9 837 aa13.16□□□□□ -0.3
RBBP4-216ENST00000525506 SULF1Q8IWU6 871 aa13.16□□□□□ -0.3
RBBP4-216ENST00000525506 ZIC5Q96T25 663 aa13.16□□□□□ -0.3
RBBP4-216ENST00000525506 BICC1Q9H694 974 aaKnown RBP13.16□□□□□ -0.3
RBBP4-216ENST00000525506 CAPN15O75808 1086 aa13.15□□□□□ -0.3
RBBP4-216ENST00000525506 HUNKP57058 714 aa13.15□□□□□ -0.3
RBBP4-216ENST00000525506 RABL6Q3YEC7 729 aaPredicted RBP13.15□□□□□ -0.3
RBBP4-216ENST00000525506 PRAMEF18Q5VWM3 479 aa13.15□□□□□ -0.3
RBBP4-216ENST00000525506 KIAA0825Q8IV33 1275 aa13.15□□□□□ -0.3
RBBP4-216ENST00000525506 ANKRD44Q8N8A2 993 aa13.15□□□□□ -0.3
RBBP4-216ENST00000525506 CDCA5Q96FF9 252 aa13.15□□□□□ -0.3
RBBP4-216ENST00000525506 GBA2Q9HCG7 927 aaPredicted RBP13.15□□□□□ -0.3
RBBP4-216ENST00000525506 TSKSQ9UJT2 592 aa13.15□□□□□ -0.3
RBBP4-216ENST00000525506 NOB1Q9ULX3 412 aaKnown RBP13.15□□□□□ -0.3
RBBP4-216ENST00000525506 JAG2Q9Y219 1238 aa13.15□□□□□ -0.3
RBBP4-216ENST00000525506 SASH1O94885 1247 aa13.14□□□□□ -0.31
RBBP4-216ENST00000525506 HSPA8P11142 646 aaKnown RBP13.14□□□□□ -0.31
RBBP4-216ENST00000525506 MAP2K1Q02750 393 aaPredicted RBP13.14□□□□□ -0.31
RBBP4-216ENST00000525506 CERS5Q8N5B7 392 aa13.14□□□□□ -0.31
RBBP4-216ENST00000525506 KLHDC4Q8TBB5 520 aa13.14□□□□□ -0.31
RBBP4-216ENST00000525506 USP44Q9H0E7 712 aa13.14□□□□□ -0.31
RBBP4-216ENST00000525506 HDAC5Q9UQL6 1122 aa13.14□□□□□ -0.31
RBBP4-216ENST00000525506 CASP8AP2Q9UKL3 1982 aa13.14□□□□□ -0.31
RBBP4-216ENST00000525506 F8W031 263 aaPredicted RBP13.13□□□□□ -0.31
RBBP4-216ENST00000525506 WNT10BO00744 389 aa13.13□□□□□ -0.31
RBBP4-216ENST00000525506 LRRC24Q50LG9 513 aa13.13□□□□□ -0.31
RBBP4-216ENST00000525506 INTS3Q68E01 1043 aaKnown RBP13.13□□□□□ -0.31
RBBP4-216ENST00000525506 C15orf52Q6ZUT6 534 aaKnown RBP13.13□□□□□ -0.31
RBBP4-216ENST00000525506 OGFOD1Q8N543 542 aa13.13□□□□□ -0.31
RBBP4-216ENST00000525506 C2orf69Q8N8R5 385 aa13.13□□□□□ -0.31
RBBP4-216ENST00000525506 HHIPL1Q96JK4 782 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms