RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 C15orf52Q6ZUT6 534 aaKnown RBP21.97■■□□□ 1.11
NR1H3-228ENST00000525441 TXNRD3Q86VQ6 643 aa21.97■■□□□ 1.11
NR1H3-228ENST00000525441 TRPM4Q8TD43 1214 aa21.97■■□□□ 1.11
NR1H3-228ENST00000525441 TMEM88BA6NKF7 163 aa21.96■■□□□ 1.11
NR1H3-228ENST00000525441 PLIN1O60240 522 aa21.96■■□□□ 1.11
NR1H3-228ENST00000525441 KLRK1P26718 216 aa21.96■■□□□ 1.11
NR1H3-228ENST00000525441 PGAP2Q9UHJ9 254 aa21.96■■□□□ 1.11
NR1H3-228ENST00000525441 BCAR3O75815 825 aa21.95■■□□□ 1.1
NR1H3-228ENST00000525441 HIRAP54198 1017 aaPredicted RBP21.95■■□□□ 1.1
NR1H3-228ENST00000525441 TBC1D10BQ4KMP7 808 aaPredicted RBP21.95■■□□□ 1.1
NR1H3-228ENST00000525441 STRIP1Q5VSL9 837 aa21.95■■□□□ 1.1
NR1H3-228ENST00000525441 INTS3Q68E01 1043 aaKnown RBP21.95■■□□□ 1.1
NR1H3-228ENST00000525441 SAMD7Q7Z3H4 446 aa21.95■■□□□ 1.1
NR1H3-228ENST00000525441 FRAT1Q92837 279 aaPredicted RBP21.95■■□□□ 1.1
NR1H3-228ENST00000525441 FBXW7Q969H0 707 aa21.95■■□□□ 1.1
NR1H3-228ENST00000525441 MROH5Q6ZUA9 1318 aa21.95■■□□□ 1.1
NR1H3-228ENST00000525441 ATF7IPQ6VMQ6 1270 aa21.94■■□□□ 1.1
NR1H3-228ENST00000525441 ZNF804AQ7Z570 1209 aa21.94■■□□□ 1.1
NR1H3-228ENST00000525441 PUS3Q9BZE2 481 aaKnown RBP21.94■■□□□ 1.1
NR1H3-228ENST00000525441 MYO3BQ8WXR4 1341 aa21.94■■□□□ 1.1
NR1H3-228ENST00000525441 SNAP23O00161 211 aa21.93■■□□□ 1.1
NR1H3-228ENST00000525441 USP17L8P0C7I0 530 aa21.93■■□□□ 1.1
NR1H3-228ENST00000525441 ZNF280AP59817 542 aaPredicted RBP21.93■■□□□ 1.1
NR1H3-228ENST00000525441 UBE4AQ14139 1066 aa21.93■■□□□ 1.1
NR1H3-228ENST00000525441 PSME4Q14997 1843 aa21.93■■□□□ 1.1
NR1H3-228ENST00000525441 KIF4BQ2VIQ3 1234 aa21.93■■□□□ 1.1
NR1H3-228ENST00000525441 RBM26Q5T8P6 1007 aaKnown RBP21.93■■□□□ 1.1
NR1H3-228ENST00000525441 GMLQ99445 158 aa21.93■■□□□ 1.1
NR1H3-228ENST00000525441 CD209Q9NNX6 404 aa21.93■■□□□ 1.1
NR1H3-228ENST00000525441 RIPOR2Q9Y4F9 1068 aa21.93■■□□□ 1.1
NR1H3-228ENST00000525441 TRIM27P14373 513 aa21.92■■□□□ 1.1
NR1H3-228ENST00000525441 DACT2Q5SW24 774 aa21.92■■□□□ 1.1
NR1H3-228ENST00000525441 TTLL5Q6EMB2 1281 aa21.92■■□□□ 1.1
NR1H3-228ENST00000525441 CDC37L1Q7L3B6 337 aa21.92■■□□□ 1.1
NR1H3-228ENST00000525441 IRS2Q9Y4H2 1338 aa21.91■■□□□ 1.1
NR1H3-228ENST00000525441 GNAI3P08754 354 aa21.91■■□□□ 1.1
NR1H3-228ENST00000525441 MMP14P50281 582 aa21.91■■□□□ 1.1
NR1H3-228ENST00000525441 METTL24Q5JXM2 366 aa21.91■■□□□ 1.1
NR1H3-228ENST00000525441 ZKSCAN2Q63HK3 967 aa21.91■■□□□ 1.1
NR1H3-228ENST00000525441 A0A1B0GUL6 1792 aa21.9■■□□□ 1.1
NR1H3-228ENST00000525441 GTF2IP78347 998 aa21.9■■□□□ 1.1
NR1H3-228ENST00000525441 OGFOD1Q8N543 542 aa21.9■■□□□ 1.1
NR1H3-228ENST00000525441 JMYQ8N9B5 988 aa21.9■■□□□ 1.1
NR1H3-228ENST00000525441 DCPSQ96C86 337 aaKnown RBP21.9■■□□□ 1.1
NR1H3-228ENST00000525441 MEIS3Q99687 375 aa21.9■■□□□ 1.1
NR1H3-228ENST00000525441 GLIS2Q9BZE0 524 aaPredicted RBP21.9■■□□□ 1.1
NR1H3-228ENST00000525441 LRRFIP2Q9Y608 721 aaKnown RBP21.9■■□□□ 1.1
NR1H3-228ENST00000525441 TRAF5O00463 557 aa21.89■■□□□ 1.09
NR1H3-228ENST00000525441 EGFRP00533 1210 aa21.89■■□□□ 1.09
NR1H3-228ENST00000525441 IL1R1P14778 569 aa21.89■■□□□ 1.09
NR1H3-228ENST00000525441 LRRC24Q50LG9 513 aa21.89■■□□□ 1.09
NR1H3-228ENST00000525441 RFX5P48382 616 aaPredicted RBP21.88■■□□□ 1.09
NR1H3-228ENST00000525441 KLHDC4Q8TBB5 520 aa21.88■■□□□ 1.09
NR1H3-228ENST00000525441 MYOZ2Q9NPC6 264 aa21.88■■□□□ 1.09
NR1H3-228ENST00000525441 MKRN1Q9UHC7 482 aaKnown RBP21.88■■□□□ 1.09
NR1H3-228ENST00000525441 ABT1Q9ULW3 272 aaKnown RBP21.88■■□□□ 1.09
NR1H3-228ENST00000525441 CNTNAP1P78357 1384 aa21.87■■□□□ 1.09
NR1H3-228ENST00000525441 EYA2O00167 538 aa21.87■■□□□ 1.09
NR1H3-228ENST00000525441 KRT26Q7Z3Y9 468 aa21.87■■□□□ 1.09
NR1H3-228ENST00000525441 CLUAP1Q96AJ1 413 aa21.87■■□□□ 1.09
NR1H3-228ENST00000525441 MXD3Q9BW11 206 aa21.87■■□□□ 1.09
NR1H3-228ENST00000525441 FBXO3Q9UK99 471 aa21.87■■□□□ 1.09
NR1H3-228ENST00000525441 HDAC9Q9UKV0 1011 aa21.87■■□□□ 1.09
NR1H3-228ENST00000525441 PDE8BO95263 885 aa21.86■■□□□ 1.09
NR1H3-228ENST00000525441 HIBADHP31937 336 aaKnown RBP21.86■■□□□ 1.09
NR1H3-228ENST00000525441 PTPN12Q05209 780 aaKnown RBP21.86■■□□□ 1.09
NR1H3-228ENST00000525441 FMR1Q06787 632 aaKnown RBP eCLIP21.86■■□□□ 1.09
NR1H3-228ENST00000525441 USP48Q86UV5 1035 aa21.86■■□□□ 1.09
NR1H3-228ENST00000525441 CELF2O95319 508 aaKnown RBP21.85■■□□□ 1.09
NR1H3-228ENST00000525441 SCARF1Q14162 830 aa21.85■■□□□ 1.09
NR1H3-228ENST00000525441 VPS37DQ86XT2 251 aa21.85■■□□□ 1.09
NR1H3-228ENST00000525441 SULF1Q8IWU6 871 aa21.85■■□□□ 1.09
NR1H3-228ENST00000525441 GGA3Q9NZ52 723 aa21.85■■□□□ 1.09
NR1H3-228ENST00000525441 TRPM7Q96QT4 1865 aa21.84■■□□□ 1.09
NR1H3-228ENST00000525441 RASSF10A6NK89 507 aa21.84■■□□□ 1.09
NR1H3-228ENST00000525441 CIAO1O76071 339 aa21.84■■□□□ 1.09
NR1H3-228ENST00000525441 SASH1O94885 1247 aa21.84■■□□□ 1.09
NR1H3-228ENST00000525441 GYG1P46976 350 aa21.84■■□□□ 1.09
NR1H3-228ENST00000525441 FKBP1AP62942 108 aaKnown RBP21.84■■□□□ 1.09
NR1H3-228ENST00000525441 PUM3Q15397 648 aaKnown RBP21.84■■□□□ 1.09
NR1H3-228ENST00000525441 DEFB115Q30KQ5 88 aa21.84■■□□□ 1.09
NR1H3-228ENST00000525441 CAVIN4Q5BKX8 364 aa21.84■■□□□ 1.09
NR1H3-228ENST00000525441 CST9Q5W186 159 aa21.84■■□□□ 1.09
NR1H3-228ENST00000525441 KIAA0825Q8IV33 1275 aa21.84■■□□□ 1.09
NR1H3-228ENST00000525441 FTSJ3Q8IY81 847 aaKnown RBP21.84■■□□□ 1.09
NR1H3-228ENST00000525441 VGLL2Q8N8G2 317 aa21.84■■□□□ 1.09
NR1H3-228ENST00000525441 FAM84BQ96KN1 310 aaPredicted RBP21.84■■□□□ 1.09
NR1H3-228ENST00000525441 TNNQ9UQP3 1299 aa21.84■■□□□ 1.09
NR1H3-228ENST00000525441 IFIT1P09914 478 aaKnown RBP21.83■■□□□ 1.09
NR1H3-228ENST00000525441 TDRD7Q8NHU6 1098 aaKnown RBP21.83■■□□□ 1.09
NR1H3-228ENST00000525441 ZNF408Q9H9D4 720 aa21.83■■□□□ 1.09
NR1H3-228ENST00000525441 GNAI2P04899 355 aa21.82■■□□□ 1.08
NR1H3-228ENST00000525441 ANGEL2Q5VTE6 544 aaKnown RBP21.82■■□□□ 1.08
NR1H3-228ENST00000525441 TMEM57Q8N5G2 664 aa21.82■■□□□ 1.08
NR1H3-228ENST00000525441 SIL1Q9H173 461 aa21.82■■□□□ 1.08
NR1H3-228ENST00000525441 FAM205AQ6ZU69 1335 aa21.81■■□□□ 1.08
NR1H3-228ENST00000525441 PITPNM2Q9BZ72 1349 aa21.81■■□□□ 1.08
NR1H3-228ENST00000525441 ZNF646O15015 1829 aaPredicted RBP21.81■■□□□ 1.08
NR1H3-228ENST00000525441 SLC5A1P13866 664 aa21.81■■□□□ 1.08
NR1H3-228ENST00000525441 FBXO33Q7Z6M2 555 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms