RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 FOXD4L5Q5VV16 416 aaPredicted RBP18.24■□□□□ 0.51
BEST1-204ENST00000524926 CLEC17AQ6ZS10 378 aa18.24■□□□□ 0.51
BEST1-204ENST00000524926 FOXD4L4Q8WXT5 416 aaPredicted RBP18.24■□□□□ 0.51
BEST1-204ENST00000524926 OSBP2Q969R2 916 aa18.24■□□□□ 0.51
BEST1-204ENST00000524926 ZNF512BQ96KM6 892 aaPredicted RBP18.24■□□□□ 0.51
BEST1-204ENST00000524926 TCEANC2Q96MN5 208 aa18.24■□□□□ 0.51
BEST1-204ENST00000524926 M0R2C6 588 aa18.24■□□□□ 0.51
BEST1-204ENST00000524926 CYP21A2P08686 494 aa18.24■□□□□ 0.51
BEST1-204ENST00000524926 ZSCAN31Q96LW9 406 aaPredicted RBP18.24■□□□□ 0.51
BEST1-204ENST00000524926 CDC5LQ99459 802 aaKnown RBP18.24■□□□□ 0.51
BEST1-204ENST00000524926 DSCC1Q9BVC3 393 aa18.24■□□□□ 0.51
BEST1-204ENST00000524926 UQCRFS1P1P0C7P4 283 aa18.23■□□□□ 0.51
BEST1-204ENST00000524926 HSPD1P10809 573 aaKnown RBP18.23■□□□□ 0.51
BEST1-204ENST00000524926 RPS6KB1P23443 525 aa18.23■□□□□ 0.51
BEST1-204ENST00000524926 RTL9Q8NET4 1388 aa18.23■□□□□ 0.51
BEST1-204ENST00000524926 ARHGEF1Q92888 912 aaKnown RBP18.23■□□□□ 0.51
BEST1-204ENST00000524926 RGL2O15211 777 aa18.23■□□□□ 0.51
BEST1-204ENST00000524926 LARGE1O95461 756 aa18.23■□□□□ 0.51
BEST1-204ENST00000524926 NEK1Q96PY6 1258 aa18.23■□□□□ 0.51
BEST1-204ENST00000524926 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.23■□□□□ 0.51
BEST1-204ENST00000524926 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.23■□□□□ 0.51
BEST1-204ENST00000524926 PHF14O94880 888 aa18.22■□□□□ 0.51
BEST1-204ENST00000524926 TTF1Q15361 905 aaPredicted RBP18.22■□□□□ 0.51
BEST1-204ENST00000524926 C3orf67Q6ZVT6 689 aa18.22■□□□□ 0.51
BEST1-204ENST00000524926 AMIGO3Q86WK7 504 aa18.22■□□□□ 0.51
BEST1-204ENST00000524926 GZF1Q9H116 711 aaPredicted RBP18.22■□□□□ 0.51
BEST1-204ENST00000524926 LRP5O75197 1615 aa18.22■□□□□ 0.51
BEST1-204ENST00000524926 PTMSP20962 102 aa18.22■□□□□ 0.51
BEST1-204ENST00000524926 CHRNDQ07001 517 aa18.22■□□□□ 0.51
BEST1-204ENST00000524926 MCTP1Q6DN14 999 aa18.22■□□□□ 0.51
BEST1-204ENST00000524926 NBPF5PQ86XG9 351 aaPredicted RBP18.22■□□□□ 0.51
BEST1-204ENST00000524926 CCDC83Q8IWF9 413 aa18.22■□□□□ 0.51
BEST1-204ENST00000524926 BCL11BQ9C0K0 894 aaPredicted RBP18.22■□□□□ 0.51
BEST1-204ENST00000524926 NYXQ9GZU5 481 aa18.22■□□□□ 0.51
BEST1-204ENST00000524926 SH2B1Q9NRF2 756 aaPredicted RBP18.22■□□□□ 0.51
BEST1-204ENST00000524926 ARID4AP29374 1257 aaPredicted RBP18.21■□□□□ 0.51
BEST1-204ENST00000524926 ANKRD1Q15327 319 aa18.21■□□□□ 0.51
BEST1-204ENST00000524926 SF3B3Q15393 1217 aaKnown RBP18.21■□□□□ 0.51
BEST1-204ENST00000524926 ANKRD18AQ8IVF6 992 aa18.21■□□□□ 0.51
BEST1-204ENST00000524926 APPBP2Q92624 585 aa18.21■□□□□ 0.51
BEST1-204ENST00000524926 SBF2Q86WG5 1849 aa18.21■□□□□ 0.51
BEST1-204ENST00000524926 RFC4P35249 363 aa18.21■□□□□ 0.51
BEST1-204ENST00000524926 ME3Q16798 604 aa18.21■□□□□ 0.51
BEST1-204ENST00000524926 TRAPPC3LQ5T215 181 aa18.21■□□□□ 0.51
BEST1-204ENST00000524926 TPCN1Q9ULQ1 816 aa18.21■□□□□ 0.51
BEST1-204ENST00000524926 SMC3Q9UQE7 1217 aa18.21■□□□□ 0.51
BEST1-204ENST00000524926 LAMB2P55268 1798 aa18.2■□□□□ 0.5
BEST1-204ENST00000524926 AKAP11Q9UKA4 1901 aa18.2■□□□□ 0.5
BEST1-204ENST00000524926 IDH1O75874 414 aaKnown RBP18.2■□□□□ 0.5
BEST1-204ENST00000524926 BRD1O95696 1058 aa18.2■□□□□ 0.5
BEST1-204ENST00000524926 SLC9C2Q5TAH2 1124 aa18.2■□□□□ 0.5
BEST1-204ENST00000524926 ZSCAN25Q6NSZ9 544 aa18.2■□□□□ 0.5
BEST1-204ENST00000524926 PUS7LQ9H0K6 701 aaKnown RBP18.2■□□□□ 0.5
BEST1-204ENST00000524926 FAM196AQ6ZSG2 479 aa18.2■□□□□ 0.5
BEST1-204ENST00000524926 PIH1D3Q9NQM4 214 aaKnown RBP18.2■□□□□ 0.5
BEST1-204ENST00000524926 SLC10A5Q5PT55 438 aa18.19■□□□□ 0.5
BEST1-204ENST00000524926 TPTE2Q6XPS3 522 aa18.19■□□□□ 0.5
BEST1-204ENST00000524926 SCN7AQ01118 1682 aa18.19■□□□□ 0.5
BEST1-204ENST00000524926 NPHP1O15259 732 aa18.19■□□□□ 0.5
BEST1-204ENST00000524926 CCDC24Q8N4L8 307 aa18.19■□□□□ 0.5
BEST1-204ENST00000524926 NECAB1Q8N987 351 aa18.19■□□□□ 0.5
BEST1-204ENST00000524926 SPATA5Q8NB90 893 aa18.19■□□□□ 0.5
BEST1-204ENST00000524926 NLRP3Q96P20 1036 aa18.19■□□□□ 0.5
BEST1-204ENST00000524926 ALDH8A1Q9H2A2 487 aaPredicted RBP18.19■□□□□ 0.5
BEST1-204ENST00000524926 LY75O60449 1722 aa18.18■□□□□ 0.5
BEST1-204ENST00000524926 BCAMP50895 628 aa18.18■□□□□ 0.5
BEST1-204ENST00000524926 SKOR2Q2VWA4 1001 aaPredicted RBP18.18■□□□□ 0.5
BEST1-204ENST00000524926 LRRC4BQ9NT99 713 aa18.18■□□□□ 0.5
BEST1-204ENST00000524926 ADD2P35612 726 aa18.18■□□□□ 0.5
BEST1-204ENST00000524926 TOB2Q14106 344 aaPredicted RBP18.18■□□□□ 0.5
BEST1-204ENST00000524926 STOX1Q6ZVD7 989 aa18.18■□□□□ 0.5
BEST1-204ENST00000524926 EP400Q96L91 3159 aa18.17■□□□□ 0.5
BEST1-204ENST00000524926 TAF1LQ8IZX4 1826 aa18.17■□□□□ 0.5
BEST1-204ENST00000524926 A0A0G2JLW4 131 aa18.17■□□□□ 0.5
BEST1-204ENST00000524926 RASGRF1Q13972 1273 aa18.17■□□□□ 0.5
BEST1-204ENST00000524926 TTLL5Q6EMB2 1281 aa18.17■□□□□ 0.5
BEST1-204ENST00000524926 BSDC1Q9NW68 430 aaPredicted RBP18.17■□□□□ 0.5
BEST1-204ENST00000524926 GPAA1O43292 621 aa18.17■□□□□ 0.5
BEST1-204ENST00000524926 DTNBO60941 627 aa18.17■□□□□ 0.5
BEST1-204ENST00000524926 FGD1P98174 961 aa18.17■□□□□ 0.5
BEST1-204ENST00000524926 KRT27Q7Z3Y8 459 aa18.17■□□□□ 0.5
BEST1-204ENST00000524926 CELF1Q92879 486 aaKnown RBP18.17■□□□□ 0.5
BEST1-204ENST00000524926 CTNNA3Q9UI47 895 aa18.17■□□□□ 0.5
BEST1-204ENST00000524926 WDR33Q9C0J8 1336 aaKnown RBP18.16■□□□□ 0.5
BEST1-204ENST00000524926 HMGB1P09429 215 aaKnown RBP18.16■□□□□ 0.5
BEST1-204ENST00000524926 GJB2P29033 226 aa18.16■□□□□ 0.5
BEST1-204ENST00000524926 Q6ZUG5 572 aa18.16■□□□□ 0.5
BEST1-204ENST00000524926 CHAMP1Q96JM3 812 aa18.16■□□□□ 0.5
BEST1-204ENST00000524926 MYH7P12883 1935 aa18.16■□□□□ 0.5
BEST1-204ENST00000524926 C4BP0C0L5 1744 aa18.16■□□□□ 0.5
BEST1-204ENST00000524926 TAF1P21675 1872 aa18.16■□□□□ 0.5
BEST1-204ENST00000524926 COL4A1P02462 1669 aa18.15■□□□□ 0.5
BEST1-204ENST00000524926 ZNF532Q9HCE3 1301 aa18.15■□□□□ 0.5
BEST1-204ENST00000524926 E7EWF7 191 aa18.15■□□□□ 0.5
BEST1-204ENST00000524926 TRIM37O94972 964 aa18.15■□□□□ 0.5
BEST1-204ENST00000524926 ST3GAL1Q11201 340 aa18.15■□□□□ 0.5
BEST1-204ENST00000524926 STK3Q13188 491 aa18.15■□□□□ 0.5
BEST1-204ENST00000524926 UBE3CQ15386 1083 aa18.15■□□□□ 0.5
BEST1-204ENST00000524926 LRRC2Q9BYS8 371 aa18.15■□□□□ 0.5
BEST1-204ENST00000524926 WWC3Q9ULE0 1092 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms