RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 CNNM1Q9NRU3 951 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 PDRG1Q9NUG6 133 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 TAOK2Q9UL54 1235 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 RIPOR2Q9Y4F9 1068 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 ATP6V1DQ9Y5K8 247 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 AKAP11Q9UKA4 1901 aa8.91□□□□□ -0.98
CASP4-204ENST00000524843 RNF113AO15541 343 aaKnown RBP8.9□□□□□ -0.98
CASP4-204ENST00000524843 ECM2O94769 699 aaPredicted RBP8.9□□□□□ -0.98
CASP4-204ENST00000524843 GPTP24298 496 aa8.9□□□□□ -0.98
CASP4-204ENST00000524843 AK2P54819 239 aa8.9□□□□□ -0.98
CASP4-204ENST00000524843 ITPK1Q13572 414 aa8.9□□□□□ -0.98
CASP4-204ENST00000524843 PUM3Q15397 648 aaKnown RBP8.9□□□□□ -0.98
CASP4-204ENST00000524843 LDHAL6AQ6ZMR3 332 aa8.9□□□□□ -0.98
CASP4-204ENST00000524843 ZGPATQ8N5A5 531 aaKnown RBP8.9□□□□□ -0.98
CASP4-204ENST00000524843 XAGE2Q96GT9 111 aa8.9□□□□□ -0.98
CASP4-204ENST00000524843 C8orf37Q96NL8 207 aa8.9□□□□□ -0.98
CASP4-204ENST00000524843 CARMIL3Q8ND23 1372 aa8.89□□□□□ -0.99
CASP4-204ENST00000524843 C4AP0C0L4 1744 aa8.89□□□□□ -0.99
CASP4-204ENST00000524843 C4BP0C0L5 1744 aa8.89□□□□□ -0.99
CASP4-204ENST00000524843 GOLIM4O00461 696 aa8.89□□□□□ -0.99
CASP4-204ENST00000524843 NTSR2O95665 410 aa8.89□□□□□ -0.99
CASP4-204ENST00000524843 MBD3O95983 291 aa8.89□□□□□ -0.99
CASP4-204ENST00000524843 SLC5A1P13866 664 aa8.89□□□□□ -0.99
CASP4-204ENST00000524843 RPS6KB1P23443 525 aa8.89□□□□□ -0.99
CASP4-204ENST00000524843 ARID4AP29374 1257 aaPredicted RBP8.89□□□□□ -0.99
CASP4-204ENST00000524843 FAM98CQ17RN3 349 aaKnown RBP8.89□□□□□ -0.99
CASP4-204ENST00000524843 CSPP1Q1MSJ5 1256 aa8.89□□□□□ -0.99
CASP4-204ENST00000524843 DDX46Q7L014 1031 aaKnown RBP8.89□□□□□ -0.99
CASP4-204ENST00000524843 ZNF589Q86UQ0 364 aaPredicted RBP8.89□□□□□ -0.99
CASP4-204ENST00000524843 VGLL2Q8N8G2 317 aa8.89□□□□□ -0.99
CASP4-204ENST00000524843 LPIN2Q92539 896 aa8.89□□□□□ -0.99
CASP4-204ENST00000524843 APPBP2Q92624 585 aa8.89□□□□□ -0.99
CASP4-204ENST00000524843 ACSBG1Q96GR2 724 aa8.89□□□□□ -0.99
CASP4-204ENST00000524843 ZNF594Q96JF6 807 aaPredicted RBP8.89□□□□□ -0.99
CASP4-204ENST00000524843 ARXQ96QS3 562 aa8.89□□□□□ -0.99
CASP4-204ENST00000524843 CDC5LQ99459 802 aaKnown RBP8.89□□□□□ -0.99
CASP4-204ENST00000524843 PUS3Q9BZE2 481 aaKnown RBP8.89□□□□□ -0.99
CASP4-204ENST00000524843 GREM2Q9H772 168 aa8.89□□□□□ -0.99
CASP4-204ENST00000524843 CTNNA3Q9UI47 895 aa8.89□□□□□ -0.99
CASP4-204ENST00000524843 SMC3Q9UQE7 1217 aa8.89□□□□□ -0.99
CASP4-204ENST00000524843 MAST3O60307 1309 aa8.88□□□□□ -0.99
CASP4-204ENST00000524843 ZMYM6O95789 1325 aa8.88□□□□□ -0.99
CASP4-204ENST00000524843 DUOX1Q9NRD9 1551 aa8.88□□□□□ -0.99
CASP4-204ENST00000524843 A0A0G2JS52 829 aa8.88□□□□□ -0.99
CASP4-204ENST00000524843 PDE8BO95263 885 aa8.88□□□□□ -0.99
CASP4-204ENST00000524843 PDCP20941 246 aa8.88□□□□□ -0.99
CASP4-204ENST00000524843 IGHMBP2P38935 993 aaKnown RBP8.88□□□□□ -0.99
CASP4-204ENST00000524843 NYXQ9GZU5 481 aa8.88□□□□□ -0.99
CASP4-204ENST00000524843 USP21Q9UK80 565 aa8.88□□□□□ -0.99
CASP4-204ENST00000524843 TBC1D2BQ9UPU7 963 aa8.88□□□□□ -0.99
CASP4-204ENST00000524843 KIF3AQ9Y496 699 aa8.88□□□□□ -0.99
CASP4-204ENST00000524843 MAST2Q6P0Q8 1798 aa8.88□□□□□ -0.99
CASP4-204ENST00000524843 TIAM2Q8IVF5 1701 aa8.88□□□□□ -0.99
CASP4-204ENST00000524843 WDR19Q8NEZ3 1342 aa8.87□□□□□ -0.99
CASP4-204ENST00000524843 IGSF3O75054 1194 aa8.87□□□□□ -0.99
CASP4-204ENST00000524843 FGFR2P21802 821 aa8.87□□□□□ -0.99
CASP4-204ENST00000524843 TIMM10P62072 90 aa8.87□□□□□ -0.99
CASP4-204ENST00000524843 TMEM87AQ8NBN3 555 aa8.87□□□□□ -0.99
CASP4-204ENST00000524843 EDC3Q96F86 508 aaKnown RBP8.87□□□□□ -0.99
CASP4-204ENST00000524843 NEK1Q96PY6 1258 aa8.87□□□□□ -0.99
CASP4-204ENST00000524843 MPHOSPH8Q99549 860 aa8.87□□□□□ -0.99
CASP4-204ENST00000524843 NIP7Q9Y221 180 aaKnown RBP eCLIP8.87□□□□□ -0.99
CASP4-204ENST00000524843 FSD2A1L4K1 749 aa8.86□□□□□ -0.99
CASP4-204ENST00000524843 GOLGA6L3A6NEY3 463 aa8.86□□□□□ -0.99
CASP4-204ENST00000524843 RPS6KA4O75676 772 aa8.86□□□□□ -0.99
CASP4-204ENST00000524843 CHRM1P11229 460 aaPredicted RBP8.86□□□□□ -0.99
CASP4-204ENST00000524843 UBE3CQ15386 1083 aa8.86□□□□□ -0.99
CASP4-204ENST00000524843 SF3B3Q15393 1217 aaKnown RBP8.86□□□□□ -0.99
CASP4-204ENST00000524843 ADCK5Q3MIX3 580 aa8.86□□□□□ -0.99
CASP4-204ENST00000524843 SUSD4Q5VX71 490 aa8.86□□□□□ -0.99
CASP4-204ENST00000524843 TMED8Q6PL24 325 aaPredicted RBP8.86□□□□□ -0.99
CASP4-204ENST00000524843 FBXL16Q8N461 479 aa8.86□□□□□ -0.99
CASP4-204ENST00000524843 LINC00116Q8NCU8 138 aa8.86□□□□□ -0.99
CASP4-204ENST00000524843 SYAP1Q96A49 352 aaPredicted RBP8.86□□□□□ -0.99
CASP4-204ENST00000524843 STX6O43752 255 aa8.85□□□□□ -0.99
CASP4-204ENST00000524843 HSPD1P10809 573 aaKnown RBP8.85□□□□□ -0.99
CASP4-204ENST00000524843 ADORA1P30542 326 aa8.85□□□□□ -0.99
CASP4-204ENST00000524843 MRE11P49959 708 aa8.85□□□□□ -0.99
CASP4-204ENST00000524843 IMMTQ16891 758 aaKnown RBP8.85□□□□□ -0.99
CASP4-204ENST00000524843 MEX3CQ5U5Q3 659 aaKnown RBP8.85□□□□□ -0.99
CASP4-204ENST00000524843 MCTP1Q6DN14 999 aa8.85□□□□□ -0.99
CASP4-204ENST00000524843 NOL8Q76FK4 1167 aaKnown RBP8.85□□□□□ -0.99
CASP4-204ENST00000524843 CERKQ8TCT0 537 aa8.85□□□□□ -0.99
CASP4-204ENST00000524843 LLPHQ9BRT6 129 aaKnown RBP8.85□□□□□ -0.99
CASP4-204ENST00000524843 AGXT2Q9BYV1 514 aa8.85□□□□□ -0.99
CASP4-204ENST00000524843 NARFQ9UHQ1 456 aa8.85□□□□□ -0.99
CASP4-204ENST00000524843 TRPC5Q9UL62 973 aaPredicted RBP8.85□□□□□ -0.99
CASP4-204ENST00000524843 ZDHHC9Q9Y397 364 aa8.85□□□□□ -0.99
CASP4-204ENST00000524843 DDX49Q9Y6V7 483 aaKnown RBP8.85□□□□□ -0.99
CASP4-204ENST00000524843 CHD4Q14839 1912 aa8.85□□□□□ -0.99
CASP4-204ENST00000524843 MYH13Q9UKX3 1938 aa8.85□□□□□ -0.99
CASP4-204ENST00000524843 KIAA1551Q9HCM1 1747 aa8.85□□□□□ -0.99
CASP4-204ENST00000524843 PDS5AQ29RF7 1337 aaKnown RBP8.84□□□□□ -0.99
CASP4-204ENST00000524843 ONECUT3O60422 494 aaPredicted RBP8.84□□□□□ -0.99
CASP4-204ENST00000524843 PHF14O94880 888 aa8.84□□□□□ -0.99
CASP4-204ENST00000524843 F13A1P00488 732 aa8.84□□□□□ -0.99
CASP4-204ENST00000524843 CYP21A2P08686 494 aa8.84□□□□□ -0.99
CASP4-204ENST00000524843 ZSCAN22P10073 491 aaPredicted RBP8.84□□□□□ -0.99
CASP4-204ENST00000524843 NCLP19338 710 aaKnown RBP8.84□□□□□ -0.99
CASP4-204ENST00000524843 ADD2P35612 726 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms