RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 MYOZ2Q9NPC6 264 aa20.79■□□□□ 0.92
HIF3A-208ENST00000524533 WTIPA6NIX2 430 aaPredicted RBP20.78■□□□□ 0.92
HIF3A-208ENST00000524533 ANP32CO43423 234 aa20.78■□□□□ 0.92
HIF3A-208ENST00000524533 SCARF1Q14162 830 aa20.78■□□□□ 0.92
HIF3A-208ENST00000524533 DNAAF4Q8WXU2 420 aa20.78■□□□□ 0.92
HIF3A-208ENST00000524533 ZIC5Q96T25 663 aa20.78■□□□□ 0.92
HIF3A-208ENST00000524533 PLA2G12BQ9BX93 195 aa20.78■□□□□ 0.92
HIF3A-208ENST00000524533 SALL2Q9Y467 1007 aaPredicted RBP20.78■□□□□ 0.92
HIF3A-208ENST00000524533 ITGA6P23229 1130 aa20.77■□□□□ 0.92
HIF3A-208ENST00000524533 FAM161AQ3B820 660 aa20.77■□□□□ 0.92
HIF3A-208ENST00000524533 LINS1Q8NG48 757 aa20.77■□□□□ 0.92
HIF3A-208ENST00000524533 FBXW7Q969H0 707 aa20.77■□□□□ 0.92
HIF3A-208ENST00000524533 A0A1B0GUL6 1792 aa20.77■□□□□ 0.91
HIF3A-208ENST00000524533 PAPPA2Q9BXP8 1791 aa20.77■□□□□ 0.91
HIF3A-208ENST00000524533 FAM155AB1AL88 458 aaPredicted RBP20.76■□□□□ 0.91
HIF3A-208ENST00000524533 ZNF157P51786 506 aaPredicted RBP20.76■□□□□ 0.91
HIF3A-208ENST00000524533 CASP7P55210 303 aa20.76■□□□□ 0.91
HIF3A-208ENST00000524533 WDR63Q8IWG1 891 aa20.76■□□□□ 0.91
HIF3A-208ENST00000524533 CCDC102AQ96A19 550 aa20.76■□□□□ 0.91
HIF3A-208ENST00000524533 PITPNM2Q9BZ72 1349 aa20.76■□□□□ 0.91
HIF3A-208ENST00000524533 EXOSC9Q06265 439 aaKnown RBP20.75■□□□□ 0.91
HIF3A-208ENST00000524533 DACT2Q5SW24 774 aa20.75■□□□□ 0.91
HIF3A-208ENST00000524533 MPHOSPH8Q99549 860 aa20.75■□□□□ 0.91
HIF3A-208ENST00000524533 ANKRD2Q9GZV1 360 aa20.75■□□□□ 0.91
HIF3A-208ENST00000524533 COA1Q9GZY4 146 aa20.75■□□□□ 0.91
HIF3A-208ENST00000524533 LEMD3Q9Y2U8 911 aa20.75■□□□□ 0.91
HIF3A-208ENST00000524533 MYO3BQ8WXR4 1341 aa20.75■□□□□ 0.91
HIF3A-208ENST00000524533 CASP8AP2Q9UKL3 1982 aa20.74■□□□□ 0.91
HIF3A-208ENST00000524533 VAMP4O75379 141 aa20.74■□□□□ 0.91
HIF3A-208ENST00000524533 ZEB1P37275 1124 aaPredicted RBP20.74■□□□□ 0.91
HIF3A-208ENST00000524533 ZNF804BA4D1E1 1349 aa20.74■□□□□ 0.91
HIF3A-208ENST00000524533 CSF1RP07333 972 aa20.73■□□□□ 0.91
HIF3A-208ENST00000524533 SLC10A3P09131 477 aa20.73■□□□□ 0.91
HIF3A-208ENST00000524533 KIF23Q02241 960 aaPredicted RBP20.73■□□□□ 0.91
HIF3A-208ENST00000524533 STRIP1Q5VSL9 837 aa20.73■□□□□ 0.91
HIF3A-208ENST00000524533 TXNRD3Q86VQ6 643 aa20.73■□□□□ 0.91
HIF3A-208ENST00000524533 MXD3Q9BW11 206 aa20.73■□□□□ 0.91
HIF3A-208ENST00000524533 KCNJ4P48050 445 aa20.72■□□□□ 0.91
HIF3A-208ENST00000524533 OGFOD1Q8N543 542 aa20.72■□□□□ 0.91
HIF3A-208ENST00000524533 AKAP11Q9UKA4 1901 aa20.72■□□□□ 0.91
HIF3A-208ENST00000524533 ANKRD18BA2A2Z9 1011 aa20.71■□□□□ 0.91
HIF3A-208ENST00000524533 ZNF316A6NFI3 1004 aaPredicted RBP20.71■□□□□ 0.91
HIF3A-208ENST00000524533 KLRK1P26718 216 aa20.71■□□□□ 0.91
HIF3A-208ENST00000524533 FKBP1BP68106 108 aa20.71■□□□□ 0.91
HIF3A-208ENST00000524533 NBPF9Q3BBW0 867 aa20.71■□□□□ 0.91
HIF3A-208ENST00000524533 SAGE1Q9NXZ1 904 aa20.71■□□□□ 0.91
HIF3A-208ENST00000524533 CCDC85CA6NKD9 419 aa20.7■□□□□ 0.9
HIF3A-208ENST00000524533 CHRNDQ07001 517 aa20.7■□□□□ 0.9
HIF3A-208ENST00000524533 MCOLN1Q9GZU1 580 aa20.7■□□□□ 0.9
HIF3A-208ENST00000524533 SCAF8Q9UPN6 1271 aaKnown RBP20.7■□□□□ 0.9
HIF3A-208ENST00000524533 F6X3S4 739 aa20.69■□□□□ 0.9
HIF3A-208ENST00000524533 CHMP3Q9Y3E7 222 aa20.69■□□□□ 0.9
HIF3A-208ENST00000524533 WNT10BO00744 389 aa20.68■□□□□ 0.9
HIF3A-208ENST00000524533 MMP14P50281 582 aa20.68■□□□□ 0.9
HIF3A-208ENST00000524533 BEND3Q5T5X7 828 aa20.68■□□□□ 0.9
HIF3A-208ENST00000524533 TTLL5Q6EMB2 1281 aa20.68■□□□□ 0.9
HIF3A-208ENST00000524533 RASAL3Q86YV0 1011 aa20.68■□□□□ 0.9
HIF3A-208ENST00000524533 SPINK5Q9NQ38 1064 aaPredicted RBP20.68■□□□□ 0.9
HIF3A-208ENST00000524533 SASH1O94885 1247 aa20.67■□□□□ 0.9
HIF3A-208ENST00000524533 GTF2IP78347 998 aa20.67■□□□□ 0.9
HIF3A-208ENST00000524533 FOXO4P98177 505 aa20.67■□□□□ 0.9
HIF3A-208ENST00000524533 IFIT5Q13325 482 aaKnown RBP20.67■□□□□ 0.9
HIF3A-208ENST00000524533 DGKZQ13574 1117 aa20.67■□□□□ 0.9
HIF3A-208ENST00000524533 HDAC9Q9UKV0 1011 aa20.67■□□□□ 0.9
HIF3A-208ENST00000524533 TRPA1O75762 1119 aa20.66■□□□□ 0.9
HIF3A-208ENST00000524533 KIAA0825Q8IV33 1275 aa20.66■□□□□ 0.9
HIF3A-208ENST00000524533 FAM9BQ8IZU0 186 aa20.66■□□□□ 0.9
HIF3A-208ENST00000524533 RNF186Q9NXI6 227 aa20.66■□□□□ 0.9
HIF3A-208ENST00000524533 ECM29Q5VYK3 1845 aa20.65■□□□□ 0.9
HIF3A-208ENST00000524533 NF2P35240 595 aa20.65■□□□□ 0.9
HIF3A-208ENST00000524533 PRAMEF18Q5VWM3 479 aa20.65■□□□□ 0.9
HIF3A-208ENST00000524533 MOB2Q70IA6 237 aa20.65■□□□□ 0.9
HIF3A-208ENST00000524533 REM2Q8IYK8 340 aaPredicted RBP20.65■□□□□ 0.9
HIF3A-208ENST00000524533 CSRNP1Q96S65 589 aa20.65■□□□□ 0.9
HIF3A-208ENST00000524533 CD209Q9NNX6 404 aa20.65■□□□□ 0.9
HIF3A-208ENST00000524533 IRS2Q9Y4H2 1338 aa20.64■□□□□ 0.89
HIF3A-208ENST00000524533 GRM8O00222 908 aa20.64■□□□□ 0.89
HIF3A-208ENST00000524533 TAF5LO75529 589 aa20.64■□□□□ 0.89
HIF3A-208ENST00000524533 TTLL12Q14166 644 aaPredicted RBP20.64■□□□□ 0.89
HIF3A-208ENST00000524533 LMBR1LQ6UX01 489 aa20.64■□□□□ 0.89
HIF3A-208ENST00000524533 APOBEC3FQ8IUX4 373 aaKnown RBP20.64■□□□□ 0.89
HIF3A-208ENST00000524533 HELBQ8NG08 1087 aaPredicted RBP20.64■□□□□ 0.89
HIF3A-208ENST00000524533 UBE2Q2LH0YL09 131 aa20.63■□□□□ 0.89
HIF3A-208ENST00000524533 SNAP23O00161 211 aa20.63■□□□□ 0.89
HIF3A-208ENST00000524533 TAF7LQ5H9L4 462 aa20.63■□□□□ 0.89
HIF3A-208ENST00000524533 C15orf52Q6ZUT6 534 aaKnown RBP20.63■□□□□ 0.89
HIF3A-208ENST00000524533 COL1A1P02452 1464 aaPredicted RBP20.62■□□□□ 0.89
HIF3A-208ENST00000524533 CCDC57Q2TAC2 916 aa20.62■□□□□ 0.89
HIF3A-208ENST00000524533 EPHA10Q5JZY3 1008 aa20.62■□□□□ 0.89
HIF3A-208ENST00000524533 ZNF804AQ7Z570 1209 aa20.62■□□□□ 0.89
HIF3A-208ENST00000524533 C9orf78Q9NZ63 289 aaPredicted RBP20.62■□□□□ 0.89
HIF3A-208ENST00000524533 SLC4A10Q6U841 1118 aa20.61■□□□□ 0.89
HIF3A-208ENST00000524533 ZBED3Q96IU2 234 aaPredicted RBP20.61■□□□□ 0.89
HIF3A-208ENST00000524533 ALDH1L1O75891 902 aa20.6■□□□□ 0.89
HIF3A-208ENST00000524533 DLGAP5Q15398 846 aa20.6■□□□□ 0.89
HIF3A-208ENST00000524533 LDHAL6AQ6ZMR3 332 aa20.6■□□□□ 0.89
HIF3A-208ENST00000524533 CERS5Q8N5B7 392 aa20.6■□□□□ 0.89
HIF3A-208ENST00000524533 ZNF594Q96JF6 807 aaPredicted RBP20.6■□□□□ 0.89
HIF3A-208ENST00000524533 SRCIN1Q9C0H9 1055 aa20.6■□□□□ 0.89
HIF3A-208ENST00000524533 CNNM1Q9NRU3 951 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms