RNA–Protein interactions for RNA: ENST00000524429.2

NECTIN1-204, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 777 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-204ENST00000524429 ZNF827Q17R98 1081 aa10.04□□□□□ -0.8
NECTIN1-204ENST00000524429 HSP90AB3PQ58FF7 597 aa10.04□□□□□ -0.8
NECTIN1-204ENST00000524429 TMCO4Q5TGY1 634 aa10.04□□□□□ -0.8
NECTIN1-204ENST00000524429 CLEC4GQ6UXB4 293 aa10.04□□□□□ -0.8
NECTIN1-204ENST00000524429 RIC3Q7Z5B4 369 aa10.04□□□□□ -0.8
NECTIN1-204ENST00000524429 LRCH3Q96II8 777 aa10.04□□□□□ -0.8
NECTIN1-204ENST00000524429 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.04□□□□□ -0.8
NECTIN1-204ENST00000524429 NRXN2Q9P2S2 1712 aa10.04□□□□□ -0.8
NECTIN1-204ENST00000524429 GNAI3P08754 354 aa10.03□□□□□ -0.8
NECTIN1-204ENST00000524429 YBX3P16989 372 aaKnown RBP eCLIP10.03□□□□□ -0.8
NECTIN1-204ENST00000524429 SSFA2P28290 1259 aa10.03□□□□□ -0.8
NECTIN1-204ENST00000524429 PIP4K2AP48426 406 aaPredicted RBP10.03□□□□□ -0.8
NECTIN1-204ENST00000524429 KCNQ4P56696 695 aa10.03□□□□□ -0.8
NECTIN1-204ENST00000524429 AIMP1Q12904 312 aaKnown RBP10.03□□□□□ -0.8
NECTIN1-204ENST00000524429 LAPTM4AQ15012 233 aa10.03□□□□□ -0.8
NECTIN1-204ENST00000524429 SLC4A10Q6U841 1118 aa10.03□□□□□ -0.8
NECTIN1-204ENST00000524429 TTLL7Q6ZT98 887 aa10.03□□□□□ -0.8
NECTIN1-204ENST00000524429 DZIP3Q86Y13 1208 aaKnown RBP10.03□□□□□ -0.8
NECTIN1-204ENST00000524429 HDAC5Q9UQL6 1122 aa10.03□□□□□ -0.8
NECTIN1-204ENST00000524429 SPDYE5A6NIY4 337 aa10.02□□□□□ -0.81
NECTIN1-204ENST00000524429 NEURL1BA8MQ27 555 aa10.02□□□□□ -0.81
NECTIN1-204ENST00000524429 IGKV5-2P06315 115 aa10.02□□□□□ -0.81
NECTIN1-204ENST00000524429 TCIRG1Q13488 830 aa10.02□□□□□ -0.81
NECTIN1-204ENST00000524429 CCDC191Q8NCU4 936 aa10.02□□□□□ -0.81
NECTIN1-204ENST00000524429 ISCA1Q9BUE6 129 aa10.02□□□□□ -0.81
NECTIN1-204ENST00000524429 USP44Q9H0E7 712 aa10.02□□□□□ -0.81
NECTIN1-204ENST00000524429 TSR3Q9UJK0 312 aaKnown RBP10.02□□□□□ -0.81
NECTIN1-204ENST00000524429 ZNF652Q9Y2D9 606 aa10.02□□□□□ -0.81
NECTIN1-204ENST00000524429 RTCBQ9Y3I0 505 aaKnown RBP10.02□□□□□ -0.81
NECTIN1-204ENST00000524429 GRIN3BO60391 1043 aa10.01□□□□□ -0.81
NECTIN1-204ENST00000524429 CAMTA2O94983 1202 aa10.01□□□□□ -0.81
NECTIN1-204ENST00000524429 POLD1P28340 1107 aa10.01□□□□□ -0.81
NECTIN1-204ENST00000524429 PTGDRQ13258 359 aa10.01□□□□□ -0.81
NECTIN1-204ENST00000524429 GCKRQ14397 625 aa10.01□□□□□ -0.81
NECTIN1-204ENST00000524429 ZNF526Q8TF50 670 aaPredicted RBP10.01□□□□□ -0.81
NECTIN1-204ENST00000524429 GPCPD1Q9NPB8 672 aa10.01□□□□□ -0.81
NECTIN1-204ENST00000524429 NARFQ9UHQ1 456 aa10.01□□□□□ -0.81
NECTIN1-204ENST00000524429 HPS5Q9UPZ3 1129 aa10.01□□□□□ -0.81
NECTIN1-204ENST00000524429 PATL2C9JE40 543 aaKnown RBP10□□□□□ -0.81
NECTIN1-204ENST00000524429 GRM8O00222 908 aa10□□□□□ -0.81
NECTIN1-204ENST00000524429 HDAC1Q13547 482 aaPredicted RBP10□□□□□ -0.81
NECTIN1-204ENST00000524429 ZNF34Q8IZ26 560 aa10□□□□□ -0.81
NECTIN1-204ENST00000524429 FLAD1Q8NFF5 587 aa10□□□□□ -0.81
NECTIN1-204ENST00000524429 MEIS3Q99687 375 aa10□□□□□ -0.81
NECTIN1-204ENST00000524429 ZBTB3Q9H5J0 574 aa10□□□□□ -0.81
NECTIN1-204ENST00000524429 USP42Q9H9J4 1324 aaKnown RBP10□□□□□ -0.81
NECTIN1-204ENST00000524429 GNAI2P04899 355 aa9.99□□□□□ -0.81
NECTIN1-204ENST00000524429 UBTFL1P0CB47 393 aaPredicted RBP9.99□□□□□ -0.81
NECTIN1-204ENST00000524429 MTX1Q13505 466 aa9.99□□□□□ -0.81
NECTIN1-204ENST00000524429 CWF19L2Q2TBE0 894 aaKnown RBP9.99□□□□□ -0.81
NECTIN1-204ENST00000524429 PARP10Q53GL7 1025 aa9.99□□□□□ -0.81
NECTIN1-204ENST00000524429 RPAP2Q8IXW5 612 aaPredicted RBP9.99□□□□□ -0.81
NECTIN1-204ENST00000524429 MYD88Q99836 296 aa9.99□□□□□ -0.81
NECTIN1-204ENST00000524429 CWC25Q9NXE8 425 aaPredicted RBP9.99□□□□□ -0.81
NECTIN1-204ENST00000524429 ZNF330Q9Y3S2 320 aaPredicted RBP9.99□□□□□ -0.81
NECTIN1-204ENST00000524429 CDHR2Q9BYE9 1310 aa9.99□□□□□ -0.81
NECTIN1-204ENST00000524429 RIC1Q4ADV7 1423 aa9.99□□□□□ -0.81
NECTIN1-204ENST00000524429 A0A1B0GUL6 1792 aa9.98□□□□□ -0.81
NECTIN1-204ENST00000524429 TRAPPC3LQ5T215 181 aa9.98□□□□□ -0.81
NECTIN1-204ENST00000524429 PACS2Q86VP3 889 aa9.98□□□□□ -0.81
NECTIN1-204ENST00000524429 RETREG2Q8NC44 543 aa9.98□□□□□ -0.81
NECTIN1-204ENST00000524429 BANK1Q8NDB2 785 aa9.98□□□□□ -0.81
NECTIN1-204ENST00000524429 SLC16A10Q8TF71 515 aa9.98□□□□□ -0.81
NECTIN1-204ENST00000524429 DDX12PQ92771 950 aa9.98□□□□□ -0.81
NECTIN1-204ENST00000524429 POM121Q96HA1 1249 aa9.98□□□□□ -0.81
NECTIN1-204ENST00000524429 CCDC136Q96JN2 1154 aa9.98□□□□□ -0.81
NECTIN1-204ENST00000524429 C9orf78Q9NZ63 289 aaPredicted RBP9.98□□□□□ -0.81
NECTIN1-204ENST00000524429 TBC1D2BQ9UPU7 963 aa9.98□□□□□ -0.81
NECTIN1-204ENST00000524429 PNPLA7Q6ZV29 1317 aa9.98□□□□□ -0.81
NECTIN1-204ENST00000524429 KDM2BQ8NHM5 1336 aa9.98□□□□□ -0.81
NECTIN1-204ENST00000524429 SPEF2Q9C093 1822 aa9.98□□□□□ -0.81
NECTIN1-204ENST00000524429 KIF13BQ9NQT8 1826 aa9.98□□□□□ -0.81
NECTIN1-204ENST00000524429 ANKRD31Q8N7Z5 1873 aa9.98□□□□□ -0.81
NECTIN1-204ENST00000524429 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.97□□□□□ -0.81
NECTIN1-204ENST00000524429 H7C1W4 665 aa9.97□□□□□ -0.81
NECTIN1-204ENST00000524429 ZPR1O75312 459 aa9.97□□□□□ -0.81
NECTIN1-204ENST00000524429 PCCAP05165 728 aaPredicted RBP9.97□□□□□ -0.81
NECTIN1-204ENST00000524429 NBPF7P0C2Y1 421 aaPredicted RBP9.97□□□□□ -0.81
NECTIN1-204ENST00000524429 SSTR3P32745 418 aaPredicted RBP9.97□□□□□ -0.81
NECTIN1-204ENST00000524429 RFC4P35249 363 aa9.97□□□□□ -0.81
NECTIN1-204ENST00000524429 CASP7P55210 303 aa9.97□□□□□ -0.81
NECTIN1-204ENST00000524429 HLFQ16534 295 aa9.97□□□□□ -0.81
NECTIN1-204ENST00000524429 CENPQQ7L2Z9 268 aaPredicted RBP9.97□□□□□ -0.81
NECTIN1-204ENST00000524429 NLRP10Q86W26 655 aa9.97□□□□□ -0.81
NECTIN1-204ENST00000524429 AMIGO3Q86WK7 504 aa9.97□□□□□ -0.81
NECTIN1-204ENST00000524429 ANKRD44Q8N8A2 993 aa9.97□□□□□ -0.81
NECTIN1-204ENST00000524429 ZBTB38Q8NAP3 1195 aaPredicted RBP9.97□□□□□ -0.81
NECTIN1-204ENST00000524429 REPIN1Q9BWE0 567 aaKnown RBP9.97□□□□□ -0.81
NECTIN1-204ENST00000524429 PLA2G12BQ9BX93 195 aa9.97□□□□□ -0.81
NECTIN1-204ENST00000524429 PCDHB15Q9Y5E8 787 aa9.97□□□□□ -0.81
NECTIN1-204ENST00000524429 UBN2Q6ZU65 1347 aa9.97□□□□□ -0.81
NECTIN1-204ENST00000524429 DLEC1Q9Y238 1755 aa9.96□□□□□ -0.81
NECTIN1-204ENST00000524429 HSP90B1P14625 803 aaKnown RBP9.96□□□□□ -0.82
NECTIN1-204ENST00000524429 RABL6Q3YEC7 729 aaPredicted RBP9.96□□□□□ -0.82
NECTIN1-204ENST00000524429 COL13A1Q5TAT6 717 aaPredicted RBP9.96□□□□□ -0.82
NECTIN1-204ENST00000524429 CEP85Q6P2H3 762 aa9.96□□□□□ -0.82
NECTIN1-204ENST00000524429 SMIM5Q71RC9 77 aa9.96□□□□□ -0.82
NECTIN1-204ENST00000524429 RGS22Q8NE09 1264 aa9.96□□□□□ -0.82
NECTIN1-204ENST00000524429 TMUB1Q9BVT8 246 aa9.96□□□□□ -0.82
NECTIN1-204ENST00000524429 RWDD1Q9H446 243 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms