RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 SCP2P22307 547 aa11.82□□□□□ -0.52
SPIDR-224ENST00000524126 LIG3P49916 1009 aa11.82□□□□□ -0.52
SPIDR-224ENST00000524126 HAP1P54257 671 aaPredicted RBP11.82□□□□□ -0.52
SPIDR-224ENST00000524126 PTPN21Q16825 1174 aa11.82□□□□□ -0.52
SPIDR-224ENST00000524126 TCEANC2Q96MN5 208 aa11.82□□□□□ -0.52
SPIDR-224ENST00000524126 SRRTQ9BXP5 876 aaKnown RBP11.82□□□□□ -0.52
SPIDR-224ENST00000524126 KIF1CO43896 1103 aaKnown RBP11.81□□□□□ -0.52
SPIDR-224ENST00000524126 PPP2R5AQ15172 486 aa11.81□□□□□ -0.52
SPIDR-224ENST00000524126 FBXW10Q5XX13 1052 aa11.81□□□□□ -0.52
SPIDR-224ENST00000524126 RSRC2Q7L4I2 434 aaKnown RBP11.81□□□□□ -0.52
SPIDR-224ENST00000524126 EFCAB13Q8IY85 973 aa11.81□□□□□ -0.52
SPIDR-224ENST00000524126 CCDC150Q8NCX0 1101 aa11.81□□□□□ -0.52
SPIDR-224ENST00000524126 CNNM3Q8NE01 707 aa11.81□□□□□ -0.52
SPIDR-224ENST00000524126 DDX11Q96FC9 970 aa11.81□□□□□ -0.52
SPIDR-224ENST00000524126 WDR24Q96S15 920 aa11.81□□□□□ -0.52
SPIDR-224ENST00000524126 GOLPH3LQ9H4A5 285 aa11.81□□□□□ -0.52
SPIDR-224ENST00000524126 SRGAP3O43295 1099 aa11.81□□□□□ -0.52
SPIDR-224ENST00000524126 CAVIN2O95810 425 aa11.81□□□□□ -0.52
SPIDR-224ENST00000524126 PRPF40BQ6NWY9 871 aaKnown RBP11.81□□□□□ -0.52
SPIDR-224ENST00000524126 ZRSR1Q15695 479 aaKnown RBP11.8□□□□□ -0.52
SPIDR-224ENST00000524126 KCNV1Q6PIU1 500 aa11.8□□□□□ -0.52
SPIDR-224ENST00000524126 ORAI2Q96SN7 254 aa11.8□□□□□ -0.52
SPIDR-224ENST00000524126 FTOQ9C0B1 505 aaKnown RBP eCLIP11.8□□□□□ -0.52
SPIDR-224ENST00000524126 USP6P35125 1406 aa11.8□□□□□ -0.52
SPIDR-224ENST00000524126 PTH1RQ03431 593 aa11.8□□□□□ -0.52
SPIDR-224ENST00000524126 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.8□□□□□ -0.52
SPIDR-224ENST00000524126 DDX17Q92841 729 aaKnown RBP11.8□□□□□ -0.52
SPIDR-224ENST00000524126 COG3Q96JB2 828 aa11.8□□□□□ -0.52
SPIDR-224ENST00000524126 UTP14AQ9BVJ6 771 aaKnown RBP11.8□□□□□ -0.52
SPIDR-224ENST00000524126 SH2B1Q9NRF2 756 aaPredicted RBP11.8□□□□□ -0.52
SPIDR-224ENST00000524126 IMPACTQ9P2X3 320 aa11.8□□□□□ -0.52
SPIDR-224ENST00000524126 MKRN1Q9UHC7 482 aaKnown RBP11.8□□□□□ -0.52
SPIDR-224ENST00000524126 PLEKHG3A1L390 1219 aa11.79□□□□□ -0.52
SPIDR-224ENST00000524126 HNRNPH1P31943 449 aaKnown RBP11.79□□□□□ -0.52
SPIDR-224ENST00000524126 STK3Q13188 491 aa11.79□□□□□ -0.52
SPIDR-224ENST00000524126 VPS53Q5VIR6 699 aa11.79□□□□□ -0.52
SPIDR-224ENST00000524126 RNF217Q8TC41 542 aa11.79□□□□□ -0.52
SPIDR-224ENST00000524126 SGSM3Q96HU1 749 aa11.79□□□□□ -0.52
SPIDR-224ENST00000524126 CLIC6Q96NY7 704 aa11.79□□□□□ -0.52
SPIDR-224ENST00000524126 FMNL2Q96PY5 1086 aa11.79□□□□□ -0.52
SPIDR-224ENST00000524126 STAP2Q9UGK3 403 aa11.79□□□□□ -0.52
SPIDR-224ENST00000524126 A0A087WUV0 522 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-224ENST00000524126 VWA3AA6NCI4 1184 aa11.79□□□□□ -0.52
SPIDR-224ENST00000524126 RPAINQ86UA6 219 aa11.79□□□□□ -0.52
SPIDR-224ENST00000524126 ZSCAN31Q96LW9 406 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-224ENST00000524126 MRFAP1Q9Y605 127 aa11.79□□□□□ -0.52
SPIDR-224ENST00000524126 CDK12Q9NYV4 1490 aaPredicted RBP11.79□□□□□ -0.52
SPIDR-224ENST00000524126 NRKQ7Z2Y5 1582 aa11.78□□□□□ -0.52
SPIDR-224ENST00000524126 G2E3Q7L622 706 aa11.78□□□□□ -0.52
SPIDR-224ENST00000524126 CCAR1Q8IX12 1150 aaKnown RBP11.78□□□□□ -0.52
SPIDR-224ENST00000524126 CEP57L1Q8IYX8 460 aa11.78□□□□□ -0.52
SPIDR-224ENST00000524126 CCDC102AQ96A19 550 aa11.78□□□□□ -0.52
SPIDR-224ENST00000524126 DHX58Q96C10 678 aa11.78□□□□□ -0.52
SPIDR-224ENST00000524126 ANO10Q9NW15 660 aa11.78□□□□□ -0.52
SPIDR-224ENST00000524126 CYP46A1Q9Y6A2 500 aa11.78□□□□□ -0.52
SPIDR-224ENST00000524126 GOLIM4O00461 696 aa11.78□□□□□ -0.52
SPIDR-224ENST00000524126 IRF6O14896 467 aa11.78□□□□□ -0.52
SPIDR-224ENST00000524126 ERLIN2O94905 339 aa11.78□□□□□ -0.52
SPIDR-224ENST00000524126 TXLNAP40222 546 aa11.78□□□□□ -0.52
SPIDR-224ENST00000524126 FOSBP53539 338 aa11.78□□□□□ -0.52
SPIDR-224ENST00000524126 GNG11P61952 73 aa11.78□□□□□ -0.52
SPIDR-224ENST00000524126 MAP3K9P80192 1104 aa11.78□□□□□ -0.52
SPIDR-224ENST00000524126 ESCO1Q5FWF5 840 aa11.78□□□□□ -0.52
SPIDR-224ENST00000524126 BEND6Q5SZJ8 279 aaPredicted RBP11.78□□□□□ -0.52
SPIDR-224ENST00000524126 RABGGTAQ92696 567 aa11.78□□□□□ -0.52
SPIDR-224ENST00000524126 GOLGA1Q92805 767 aa11.78□□□□□ -0.52
SPIDR-224ENST00000524126 RAI14Q9P0K7 980 aa11.78□□□□□ -0.52
SPIDR-224ENST00000524126 CCDC196A0A1B0GTZ2 297 aa11.77□□□□□ -0.52
SPIDR-224ENST00000524126 CCDC151A5D8V7 595 aa11.77□□□□□ -0.52
SPIDR-224ENST00000524126 SOCS7O14512 581 aa11.77□□□□□ -0.52
SPIDR-224ENST00000524126 TUBB4AP04350 444 aa11.77□□□□□ -0.52
SPIDR-224ENST00000524126 CPLX2Q6PUV4 134 aaKnown RBP11.77□□□□□ -0.52
SPIDR-224ENST00000524126 PNKPQ96T60 521 aa11.77□□□□□ -0.52
SPIDR-224ENST00000524126 PNPLA6Q8IY17 1366 aa11.77□□□□□ -0.52
SPIDR-224ENST00000524126 PPFIA4O75335 1185 aa11.77□□□□□ -0.53
SPIDR-224ENST00000524126 KCNJ6P48051 423 aa11.77□□□□□ -0.53
SPIDR-224ENST00000524126 HSP90AB2PQ58FF8 381 aa11.77□□□□□ -0.53
SPIDR-224ENST00000524126 LRCH2Q5VUJ6 765 aa11.77□□□□□ -0.53
SPIDR-224ENST00000524126 FAM204AQ9H8W3 233 aa11.77□□□□□ -0.53
SPIDR-224ENST00000524126 ZSWIM6Q9HCJ5 1215 aa11.77□□□□□ -0.53
SPIDR-224ENST00000524126 ABCB6Q9NP58 842 aa11.77□□□□□ -0.53
SPIDR-224ENST00000524126 STRCP1A6NGW2 1772 aa11.77□□□□□ -0.53
SPIDR-224ENST00000524126 NRDCO43847 1150 aa11.76□□□□□ -0.53
SPIDR-224ENST00000524126 GNAI2P04899 355 aa11.76□□□□□ -0.53
SPIDR-224ENST00000524126 SLC4A2P04920 1241 aa11.76□□□□□ -0.53
SPIDR-224ENST00000524126 PROSER2Q86WR7 435 aaPredicted RBP11.76□□□□□ -0.53
SPIDR-224ENST00000524126 ANKZF1Q9H8Y5 726 aa11.76□□□□□ -0.53
SPIDR-224ENST00000524126 PUF60Q9UHX1 559 aaKnown RBP11.76□□□□□ -0.53
SPIDR-224ENST00000524126 EXOC5O00471 708 aa11.76□□□□□ -0.53
SPIDR-224ENST00000524126 FOXO3O43524 673 aa11.76□□□□□ -0.53
SPIDR-224ENST00000524126 JAK2O60674 1132 aa11.76□□□□□ -0.53
SPIDR-224ENST00000524126 DPCR1Q3MIW9 517 aa11.76□□□□□ -0.53
SPIDR-224ENST00000524126 FAM43BQ6ZT52 329 aaPredicted RBP11.76□□□□□ -0.53
SPIDR-224ENST00000524126 HDXQ7Z353 690 aa11.76□□□□□ -0.53
SPIDR-224ENST00000524126 JPH2Q9BR39 696 aaPredicted RBP11.76□□□□□ -0.53
SPIDR-224ENST00000524126 RABEP2Q9H5N1 569 aa11.76□□□□□ -0.53
SPIDR-224ENST00000524126 FMN2Q9NZ56 1722 aa11.76□□□□□ -0.53
SPIDR-224ENST00000524126 EPB41L2O43491 1005 aaKnown RBP11.75□□□□□ -0.53
SPIDR-224ENST00000524126 RAB11FIP3O75154 756 aa11.75□□□□□ -0.53
SPIDR-224ENST00000524126 PSME1Q06323 249 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms