RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 GGA1Q9UJY5 639 aa11.36□□□□□ -0.59
SDCBP-212ENST00000523483 COL24A1Q17RW2 1714 aa11.36□□□□□ -0.59
SDCBP-212ENST00000523483 ZNF609O15014 1411 aa11.36□□□□□ -0.59
SDCBP-212ENST00000523483 XDHP47989 1333 aa11.36□□□□□ -0.59
SDCBP-212ENST00000523483 SALL3Q9BXA9 1300 aa11.36□□□□□ -0.59
SDCBP-212ENST00000523483 TBC1D9Q6ZT07 1266 aa11.36□□□□□ -0.59
SDCBP-212ENST00000523483 TXNRD3Q86VQ6 643 aa11.36□□□□□ -0.59
SDCBP-212ENST00000523483 STAP2Q9UGK3 403 aa11.36□□□□□ -0.59
SDCBP-212ENST00000523483 BCS1LQ9Y276 419 aa11.36□□□□□ -0.59
SDCBP-212ENST00000523483 IDH1O75874 414 aaKnown RBP11.36□□□□□ -0.59
SDCBP-212ENST00000523483 HOXA10P31260 410 aaPredicted RBP11.36□□□□□ -0.59
SDCBP-212ENST00000523483 CWC27Q6UX04 472 aaKnown RBP11.36□□□□□ -0.59
SDCBP-212ENST00000523483 MPNDQ8N594 471 aa11.36□□□□□ -0.59
SDCBP-212ENST00000523483 CNKSR1Q969H4 720 aa11.36□□□□□ -0.59
SDCBP-212ENST00000523483 ANTXR1Q9H6X2 564 aa11.36□□□□□ -0.59
SDCBP-212ENST00000523483 GPR108Q9NPR9 543 aa11.36□□□□□ -0.59
SDCBP-212ENST00000523483 CDC45O75419 566 aa11.35□□□□□ -0.59
SDCBP-212ENST00000523483 ZAP70P43403 619 aa11.35□□□□□ -0.59
SDCBP-212ENST00000523483 C8orf34Q49A92 452 aa11.35□□□□□ -0.59
SDCBP-212ENST00000523483 DIAPH3Q9NSV4 1193 aa11.35□□□□□ -0.59
SDCBP-212ENST00000523483 SPEF2Q9C093 1822 aa11.35□□□□□ -0.59
SDCBP-212ENST00000523483 SEC24BO95487 1268 aa11.35□□□□□ -0.59
SDCBP-212ENST00000523483 CHGBP05060 677 aa11.35□□□□□ -0.59
SDCBP-212ENST00000523483 TTLL6Q8N841 843 aa11.35□□□□□ -0.59
SDCBP-212ENST00000523483 OSBPL3Q9H4L5 887 aa11.35□□□□□ -0.59
SDCBP-212ENST00000523483 ATP5JP18859 108 aa11.34□□□□□ -0.59
SDCBP-212ENST00000523483 MCAMP43121 646 aa11.34□□□□□ -0.59
SDCBP-212ENST00000523483 UBE4AQ14139 1066 aa11.34□□□□□ -0.59
SDCBP-212ENST00000523483 SLFNL1Q499Z3 407 aa11.34□□□□□ -0.59
SDCBP-212ENST00000523483 BACH2Q9BYV9 841 aa11.34□□□□□ -0.59
SDCBP-212ENST00000523483 PAG1Q9NWQ8 432 aa11.34□□□□□ -0.59
SDCBP-212ENST00000523483 ATP6V0A2Q9Y487 856 aa11.34□□□□□ -0.59
SDCBP-212ENST00000523483 HIBADHP31937 336 aaKnown RBP11.34□□□□□ -0.59
SDCBP-212ENST00000523483 WASHC4Q2M389 1173 aa11.34□□□□□ -0.59
SDCBP-212ENST00000523483 ZC3H12CQ9C0D7 883 aaKnown RBP11.34□□□□□ -0.59
SDCBP-212ENST00000523483 GNL3LQ9NVN8 582 aaKnown RBP11.34□□□□□ -0.59
SDCBP-212ENST00000523483 KLRG2A4D1S0 409 aaPredicted RBP11.33□□□□□ -0.6
SDCBP-212ENST00000523483 FGFR2P21802 821 aa11.33□□□□□ -0.6
SDCBP-212ENST00000523483 RASGRF1Q13972 1273 aa11.33□□□□□ -0.6
SDCBP-212ENST00000523483 DOK7Q18PE1 504 aa11.33□□□□□ -0.6
SDCBP-212ENST00000523483 UPF2Q9HAU5 1272 aaKnown RBP11.33□□□□□ -0.6
SDCBP-212ENST00000523483 POLLQ9UGP5 575 aa11.33□□□□□ -0.6
SDCBP-212ENST00000523483 NLGN2Q8NFZ4 835 aa11.33□□□□□ -0.6
SDCBP-212ENST00000523483 SP8Q8IXZ3 490 aa11.33□□□□□ -0.6
SDCBP-212ENST00000523483 TBC1D16Q8TBP0 767 aa11.33□□□□□ -0.6
SDCBP-212ENST00000523483 EVI5LQ96CN4 794 aa11.33□□□□□ -0.6
SDCBP-212ENST00000523483 FAM84BQ96KN1 310 aaPredicted RBP11.33□□□□□ -0.6
SDCBP-212ENST00000523483 PIM2Q9P1W9 311 aa11.33□□□□□ -0.6
SDCBP-212ENST00000523483 PTGER2P43116 358 aa11.32□□□□□ -0.6
SDCBP-212ENST00000523483 STYK1Q6J9G0 422 aa11.32□□□□□ -0.6
SDCBP-212ENST00000523483 ANO2Q9NQ90 1003 aa11.32□□□□□ -0.6
SDCBP-212ENST00000523483 TSHZ2Q9NRE2 1034 aa11.32□□□□□ -0.6
SDCBP-212ENST00000523483 LRP2BPQ9P2M1 347 aa11.32□□□□□ -0.6
SDCBP-212ENST00000523483 SPATA5Q8NB90 893 aa11.32□□□□□ -0.6
SDCBP-212ENST00000523483 HMG20BQ9P0W2 317 aa11.32□□□□□ -0.6
SDCBP-212ENST00000523483 HAUS7Q99871 368 aa11.32□□□□□ -0.6
SDCBP-212ENST00000523483 FHDC1Q9C0D6 1143 aaPredicted RBP11.32□□□□□ -0.6
SDCBP-212ENST00000523483 DBNDD1Q9H9R9 158 aa11.32□□□□□ -0.6
SDCBP-212ENST00000523483 LEMD3Q9Y2U8 911 aa11.32□□□□□ -0.6
SDCBP-212ENST00000523483 LAMB2P55268 1798 aa11.32□□□□□ -0.6
SDCBP-212ENST00000523483 UQCRFS1P1P0C7P4 283 aa11.31□□□□□ -0.6
SDCBP-212ENST00000523483 ATP2B4P23634 1241 aa11.31□□□□□ -0.6
SDCBP-212ENST00000523483 DALRD3Q5D0E6 543 aaKnown RBP11.31□□□□□ -0.6
SDCBP-212ENST00000523483 FAM227BQ96M60 508 aa11.31□□□□□ -0.6
SDCBP-212ENST00000523483 RAI14Q9P0K7 980 aa11.31□□□□□ -0.6
SDCBP-212ENST00000523483 AOX1Q06278 1338 aa11.31□□□□□ -0.6
SDCBP-212ENST00000523483 ZNF804AQ7Z570 1209 aa11.31□□□□□ -0.6
SDCBP-212ENST00000523483 C10orf71Q711Q0 1435 aa11.3□□□□□ -0.6
SDCBP-212ENST00000523483 CYP2E1P05181 493 aaPredicted RBP11.3□□□□□ -0.6
SDCBP-212ENST00000523483 ANKRD31Q8N7Z5 1873 aa11.3□□□□□ -0.6
SDCBP-212ENST00000523483 CHMLP26374 656 aa11.3□□□□□ -0.6
SDCBP-212ENST00000523483 TMC4Q7Z404 712 aa11.3□□□□□ -0.6
SDCBP-212ENST00000523483 SEC62Q99442 399 aaKnown RBP11.3□□□□□ -0.6
SDCBP-212ENST00000523483 F8W031 263 aaPredicted RBP11.29□□□□□ -0.6
SDCBP-212ENST00000523483 NMIQ13287 307 aaPredicted RBP11.29□□□□□ -0.6
SDCBP-212ENST00000523483 AOC3Q16853 763 aa11.29□□□□□ -0.6
SDCBP-212ENST00000523483 SLC9C2Q5TAH2 1124 aa11.29□□□□□ -0.6
SDCBP-212ENST00000523483 ZNF277Q9NRM2 450 aaPredicted RBP11.29□□□□□ -0.6
SDCBP-212ENST00000523483 PPIP5K2O43314 1243 aa11.29□□□□□ -0.6
SDCBP-212ENST00000523483 TGFB2P61812 414 aa11.29□□□□□ -0.6
SDCBP-212ENST00000523483 KIAA1211Q6ZU35 1233 aa11.29□□□□□ -0.6
SDCBP-212ENST00000523483 KBTBD3Q8NAB2 608 aa11.29□□□□□ -0.6
SDCBP-212ENST00000523483 PIH1D3Q9NQM4 214 aaKnown RBP11.29□□□□□ -0.6
SDCBP-212ENST00000523483 KCNA3P22001 575 aa11.29□□□□□ -0.6
SDCBP-212ENST00000523483 CCDC129Q6ZRS4 1044 aa11.29□□□□□ -0.6
SDCBP-212ENST00000523483 SGIP1Q9BQI5 828 aa11.29□□□□□ -0.6
SDCBP-212ENST00000523483 GTF2IP78347 998 aa11.28□□□□□ -0.6
SDCBP-212ENST00000523483 CCDC93Q567U6 631 aa11.28□□□□□ -0.6
SDCBP-212ENST00000523483 A0A0D9SFI3 127 aa11.28□□□□□ -0.6
SDCBP-212ENST00000523483 IL25Q9H293 177 aa11.28□□□□□ -0.6
SDCBP-212ENST00000523483 CD209Q9NNX6 404 aa11.28□□□□□ -0.6
SDCBP-212ENST00000523483 ARID4AP29374 1257 aaPredicted RBP11.28□□□□□ -0.6
SDCBP-212ENST00000523483 CACNA1SQ13698 1873 aa11.28□□□□□ -0.6
SDCBP-212ENST00000523483 LARGE2Q8N3Y3 721 aa11.28□□□□□ -0.6
SDCBP-212ENST00000523483 MAGEB6Q8N7X4 407 aa11.28□□□□□ -0.6
SDCBP-212ENST00000523483 EYA3Q99504 573 aa11.28□□□□□ -0.6
SDCBP-212ENST00000523483 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.28□□□□□ -0.6
SDCBP-212ENST00000523483 DENND2AQ9ULE3 1009 aa11.28□□□□□ -0.6
SDCBP-212ENST00000523483 CD2APQ9Y5K6 639 aa11.28□□□□□ -0.6
SDCBP-212ENST00000523483 MIGA1Q8NAN2 632 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms