RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 ZNF646O15015 1829 aaPredicted RBP15.1■□□□□ 0.01
SDCBP-211ENST00000523441 CHL1O00533 1208 aa15.09■□□□□ 0.01
SDCBP-211ENST00000523441 DUSP27Q5VZP5 1158 aa15.09■□□□□ 0.01
SDCBP-211ENST00000523441 SPRYD7Q5W111 196 aa15.09■□□□□ 0.01
SDCBP-211ENST00000523441 OTOP1Q7RTM1 612 aa15.09■□□□□ 0.01
SDCBP-211ENST00000523441 PODNQ7Z5L7 613 aa15.09■□□□□ 0.01
SDCBP-211ENST00000523441 KIAA0825Q8IV33 1275 aa15.09■□□□□ 0.01
SDCBP-211ENST00000523441 CD99L2Q8TCZ2 262 aa15.09■□□□□ 0.01
SDCBP-211ENST00000523441 PDE8AO60658 829 aa15.08■□□□□ 0
SDCBP-211ENST00000523441 EN2P19622 333 aaPredicted RBP15.08■□□□□ 0
SDCBP-211ENST00000523441 DACT2Q5SW24 774 aa15.08■□□□□ 0
SDCBP-211ENST00000523441 SLC10A4Q96EP9 437 aa15.08■□□□□ 0
SDCBP-211ENST00000523441 CLMNQ96JQ2 1002 aa15.08■□□□□ 0
SDCBP-211ENST00000523441 MYH3P11055 1940 aa15.07■□□□□ 0
SDCBP-211ENST00000523441 CWC25Q9NXE8 425 aaPredicted RBP15.07■□□□□ 0
SDCBP-211ENST00000523441 ZNF609O15014 1411 aa15.07■□□□□ 0
SDCBP-211ENST00000523441 HSP90B1P14625 803 aaKnown RBP15.06■□□□□ 0
SDCBP-211ENST00000523441 TXNRD3Q86VQ6 643 aa15.06■□□□□ 0
SDCBP-211ENST00000523441 IFNL1Q8IU54 200 aa15.06■□□□□ 0
SDCBP-211ENST00000523441 TRIM35Q9UPQ4 493 aa15.06■□□□□ 0
SDCBP-211ENST00000523441 F8W031 263 aaPredicted RBP15.05■□□□□ -0
SDCBP-211ENST00000523441 IGF2BP3O00425 579 aaKnown RBP eCLIP15.05■□□□□ -0
SDCBP-211ENST00000523441 ALDH1A1P00352 501 aa15.05■□□□□ -0
SDCBP-211ENST00000523441 PCCAP05165 728 aaPredicted RBP15.05■□□□□ -0
SDCBP-211ENST00000523441 KLRK1P26718 216 aa15.05■□□□□ -0
SDCBP-211ENST00000523441 CCT4P50991 539 aaKnown RBP15.05■□□□□ -0
SDCBP-211ENST00000523441 GTF2IP78347 998 aa15.05■□□□□ -0
SDCBP-211ENST00000523441 TRIM28Q13263 835 aaKnown RBP15.05■□□□□ -0
SDCBP-211ENST00000523441 NOM1Q5C9Z4 860 aaKnown RBP15.05■□□□□ -0
SDCBP-211ENST00000523441 APOBEC3FQ8IUX4 373 aaKnown RBP15.05■□□□□ -0
SDCBP-211ENST00000523441 RBBP6Q7Z6E9 1792 aaKnown RBP15.05■□□□□ -0
SDCBP-211ENST00000523441 CENPFP49454 3210 aa15.05■□□□□ -0
SDCBP-211ENST00000523441 MKI67P46013 3256 aaKnown RBP15.04■□□□□ -0
SDCBP-211ENST00000523441 KIAA0100Q14667 2235 aaKnown RBP15.04■□□□□ -0
SDCBP-211ENST00000523441 MED23Q9ULK4 1368 aa15.04■□□□□ -0
SDCBP-211ENST00000523441 CLRN2A0PK11 232 aa15.04■□□□□ -0
SDCBP-211ENST00000523441 MANSC4A6NHS7 340 aaPredicted RBP15.04■□□□□ -0
SDCBP-211ENST00000523441 ECM2O94769 699 aaPredicted RBP15.04■□□□□ -0
SDCBP-211ENST00000523441 FXR1P51114 621 aaKnown RBP eCLIP15.04■□□□□ -0
SDCBP-211ENST00000523441 INTS3Q68E01 1043 aaKnown RBP15.04■□□□□ -0
SDCBP-211ENST00000523441 TTLL5Q6EMB2 1281 aa15.04■□□□□ -0
SDCBP-211ENST00000523441 WNK4Q96J92 1243 aa15.04■□□□□ -0
SDCBP-211ENST00000523441 CDC5LQ99459 802 aaKnown RBP15.04■□□□□ -0
SDCBP-211ENST00000523441 GREM2Q9H772 168 aa15.04■□□□□ -0
SDCBP-211ENST00000523441 MBIPQ9NS73 344 aa15.04■□□□□ -0
SDCBP-211ENST00000523441 MINPP1Q9UNW1 487 aa15.04■□□□□ -0
SDCBP-211ENST00000523441 PTPN22Q9Y2R2 807 aa15.04■□□□□ -0
SDCBP-211ENST00000523441 PCDHAC2Q9Y5I4 1007 aa15.04■□□□□ -0
SDCBP-211ENST00000523441 MYO3BQ8WXR4 1341 aa15.03■□□□□ -0
SDCBP-211ENST00000523441 CTSWP56202 376 aa15.03■□□□□ -0
SDCBP-211ENST00000523441 CRHR2Q13324 411 aa15.03■□□□□ -0
SDCBP-211ENST00000523441 LDLRAD1Q5T700 205 aa15.03■□□□□ -0
SDCBP-211ENST00000523441 STRIP1Q5VSL9 837 aa15.03■□□□□ -0
SDCBP-211ENST00000523441 CCDC191Q8NCU4 936 aa15.03■□□□□ -0
SDCBP-211ENST00000523441 ERO1AQ96HE7 468 aa15.03■□□□□ -0
SDCBP-211ENST00000523441 DEFB129Q9H1M3 183 aa15.03■□□□□ -0
SDCBP-211ENST00000523441 EFCC1Q9HA90 598 aa15.03■□□□□ -0
SDCBP-211ENST00000523441 VEZTQ9HBM0 779 aa15.03■□□□□ -0
SDCBP-211ENST00000523441 COLQQ9Y215 455 aaPredicted RBP15.03■□□□□ -0
SDCBP-211ENST00000523441 ECM29Q5VYK3 1845 aa15.03■□□□□ -0
SDCBP-211ENST00000523441 HTTP42858 3142 aa15.03■□□□□ -0
SDCBP-211ENST00000523441 HOXB7P09629 217 aa15.02■□□□□ -0
SDCBP-211ENST00000523441 KCNJ4P48050 445 aa15.02■□□□□ -0
SDCBP-211ENST00000523441 DLGAP5Q15398 846 aa15.02■□□□□ -0
SDCBP-211ENST00000523441 TMEM106CQ9BVX2 250 aa15.02■□□□□ -0
SDCBP-211ENST00000523441 COA1Q9GZY4 146 aa15.02■□□□□ -0
SDCBP-211ENST00000523441 JAG2Q9Y219 1238 aa15.02■□□□□ -0
SDCBP-211ENST00000523441 MAP3K2Q9Y2U5 619 aa15.02■□□□□ -0
SDCBP-211ENST00000523441 WDR43Q15061 677 aaKnown RBP eCLIP15.01□□□□□ -0.01
SDCBP-211ENST00000523441 SLC4A8Q2Y0W8 1093 aa15.01□□□□□ -0.01
SDCBP-211ENST00000523441 METTL22Q9BUU2 404 aaPredicted RBP15.01□□□□□ -0.01
SDCBP-211ENST00000523441 CFHR5Q9BXR6 569 aa15.01□□□□□ -0.01
SDCBP-211ENST00000523441 SSC5DA1L4H1 1573 aa15□□□□□ -0.01
SDCBP-211ENST00000523441 PPP1R12BO60237 982 aaPredicted RBP15□□□□□ -0.01
SDCBP-211ENST00000523441 RBM5P52756 815 aaKnown RBP eCLIP15□□□□□ -0.01
SDCBP-211ENST00000523441 CAP1Q01518 475 aa15□□□□□ -0.01
SDCBP-211ENST00000523441 TTLL11Q8NHH1 800 aa15□□□□□ -0.01
SDCBP-211ENST00000523441 RUNDC1Q96C34 613 aa15□□□□□ -0.01
SDCBP-211ENST00000523441 ELP3Q9H9T3 547 aa15□□□□□ -0.01
SDCBP-211ENST00000523441 BSDC1Q9NW68 430 aaPredicted RBP15□□□□□ -0.01
SDCBP-211ENST00000523441 ZSWIM8A7E2V4 1837 aa15□□□□□ -0.01
SDCBP-211ENST00000523441 OTOFQ9HC10 1997 aa15□□□□□ -0.01
SDCBP-211ENST00000523441 ZNF804BA4D1E1 1349 aa14.99□□□□□ -0.01
SDCBP-211ENST00000523441 SNAP23O00161 211 aa14.99□□□□□ -0.01
SDCBP-211ENST00000523441 DDX58O95786 925 aaKnown RBP14.99□□□□□ -0.01
SDCBP-211ENST00000523441 GJA5P36382 358 aa14.99□□□□□ -0.01
SDCBP-211ENST00000523441 IGHMBP2P38935 993 aaKnown RBP14.99□□□□□ -0.01
SDCBP-211ENST00000523441 INHBEP58166 350 aa14.99□□□□□ -0.01
SDCBP-211ENST00000523441 SP3Q02447 781 aa14.99□□□□□ -0.01
SDCBP-211ENST00000523441 CWF19L2Q2TBE0 894 aaKnown RBP14.99□□□□□ -0.01
SDCBP-211ENST00000523441 NBPF12Q5TAG4 269 aaPredicted RBP14.99□□□□□ -0.01
SDCBP-211ENST00000523441 OTUD7BQ6GQQ9 843 aa14.99□□□□□ -0.01
SDCBP-211ENST00000523441 ZBTB48P10074 688 aaPredicted RBP14.98□□□□□ -0.01
SDCBP-211ENST00000523441 SLC9C1Q4G0N8 1177 aa14.98□□□□□ -0.01
SDCBP-211ENST00000523441 UBE3BQ7Z3V4 1068 aa14.98□□□□□ -0.01
SDCBP-211ENST00000523441 PTCH2Q9Y6C5 1203 aa14.98□□□□□ -0.01
SDCBP-211ENST00000523441 AOX1Q06278 1338 aa14.97□□□□□ -0.01
SDCBP-211ENST00000523441 CEP290O15078 2479 aa14.97□□□□□ -0.01
SDCBP-211ENST00000523441 IREB2P48200 963 aaKnown RBP14.97□□□□□ -0.01
SDCBP-211ENST00000523441 CFAP100Q494V2 611 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms