RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 TTC5Q8N0Z6 440 aa10.4□□□□□ -0.74
CSMD1-212ENST00000523387 RCOR1Q9UKL0 485 aa10.4□□□□□ -0.74
CSMD1-212ENST00000523387 PCDHA7Q9UN72 937 aa10.4□□□□□ -0.74
CSMD1-212ENST00000523387 KLF18A0A0U1RQI7 1052 aa10.4□□□□□ -0.75
CSMD1-212ENST00000523387 IPO7O95373 1038 aaKnown RBP10.4□□□□□ -0.75
CSMD1-212ENST00000523387 NLRP12P59046 1061 aa10.4□□□□□ -0.75
CSMD1-212ENST00000523387 GOLGA8FQ08AF8 430 aa10.4□□□□□ -0.75
CSMD1-212ENST00000523387 GOLGA8DPQ0D2H9 430 aa10.4□□□□□ -0.75
CSMD1-212ENST00000523387 SCRN1Q12765 414 aa10.4□□□□□ -0.75
CSMD1-212ENST00000523387 CCDC102BQ68D86 513 aa10.4□□□□□ -0.75
CSMD1-212ENST00000523387 MPHOSPH8Q99549 860 aa10.4□□□□□ -0.75
CSMD1-212ENST00000523387 MROH2AA6NES4 1674 aa10.39□□□□□ -0.75
CSMD1-212ENST00000523387 H0YHG0 523 aa10.39□□□□□ -0.75
CSMD1-212ENST00000523387 NDUFA8P51970 172 aa10.39□□□□□ -0.75
CSMD1-212ENST00000523387 PTPN21Q16825 1174 aa10.39□□□□□ -0.75
CSMD1-212ENST00000523387 IMMTQ16891 758 aaKnown RBP10.39□□□□□ -0.75
CSMD1-212ENST00000523387 CCDC158Q5M9N0 1113 aa10.39□□□□□ -0.75
CSMD1-212ENST00000523387 RASSF8Q8NHQ8 419 aa10.39□□□□□ -0.75
CSMD1-212ENST00000523387 TLR7Q9NYK1 1049 aaKnown RBP10.39□□□□□ -0.75
CSMD1-212ENST00000523387 POTEB2H3BUK9 544 aa10.39□□□□□ -0.75
CSMD1-212ENST00000523387 RHOXF2BP0C7M4 288 aa10.39□□□□□ -0.75
CSMD1-212ENST00000523387 GPR161Q8N6U8 529 aaKnown RBP10.39□□□□□ -0.75
CSMD1-212ENST00000523387 GPATCH11Q8N954 259 aa10.39□□□□□ -0.75
CSMD1-212ENST00000523387 LINS1Q8NG48 757 aa10.39□□□□□ -0.75
CSMD1-212ENST00000523387 RHOXF2Q9BQY4 288 aa10.39□□□□□ -0.75
CSMD1-212ENST00000523387 GOLPH3LQ9H4A5 285 aa10.39□□□□□ -0.75
CSMD1-212ENST00000523387 ARHGEF10O15013 1369 aa10.39□□□□□ -0.75
CSMD1-212ENST00000523387 CAMSAP1Q5T5Y3 1602 aa10.39□□□□□ -0.75
CSMD1-212ENST00000523387 ARHGAP6O43182 974 aa10.39□□□□□ -0.75
CSMD1-212ENST00000523387 CSB-PGBD3P0DP91 1061 aa10.39□□□□□ -0.75
CSMD1-212ENST00000523387 GYS2P54840 703 aa10.39□□□□□ -0.75
CSMD1-212ENST00000523387 SUCLG2Q96I99 432 aa10.39□□□□□ -0.75
CSMD1-212ENST00000523387 SEC62Q99442 399 aaKnown RBP10.39□□□□□ -0.75
CSMD1-212ENST00000523387 EPC1Q9H2F5 836 aa10.39□□□□□ -0.75
CSMD1-212ENST00000523387 UHRF1BP1LA0JNW5 1464 aa10.38□□□□□ -0.75
CSMD1-212ENST00000523387 TAF5LO75529 589 aa10.38□□□□□ -0.75
CSMD1-212ENST00000523387 TTC31Q49AM3 519 aaPredicted RBP10.38□□□□□ -0.75
CSMD1-212ENST00000523387 E4F1Q66K89 784 aaPredicted RBP10.38□□□□□ -0.75
CSMD1-212ENST00000523387 ADALQ6DHV7 355 aa10.38□□□□□ -0.75
CSMD1-212ENST00000523387 RUFY1Q96T51 708 aa10.38□□□□□ -0.75
CSMD1-212ENST00000523387 ZC3H13Q5T200 1668 aaKnown RBP10.38□□□□□ -0.75
CSMD1-212ENST00000523387 CCDC175P0C221 793 aa10.38□□□□□ -0.75
CSMD1-212ENST00000523387 CHMP4BP1P59074 171 aa10.38□□□□□ -0.75
CSMD1-212ENST00000523387 CTR9Q6PD62 1173 aa10.38□□□□□ -0.75
CSMD1-212ENST00000523387 UBE3BQ7Z3V4 1068 aa10.38□□□□□ -0.75
CSMD1-212ENST00000523387 DHX40Q8IX18 779 aaKnown RBP10.38□□□□□ -0.75
CSMD1-212ENST00000523387 TCHHQ07283 1943 aa10.38□□□□□ -0.75
CSMD1-212ENST00000523387 IFIT1P09914 478 aaKnown RBP10.37□□□□□ -0.75
CSMD1-212ENST00000523387 MTX1Q13505 466 aa10.37□□□□□ -0.75
CSMD1-212ENST00000523387 HDXQ7Z353 690 aa10.37□□□□□ -0.75
CSMD1-212ENST00000523387 CRACR2AQ9BSW2 395 aa10.37□□□□□ -0.75
CSMD1-212ENST00000523387 OSBPL5Q9H0X9 879 aaPredicted RBP10.37□□□□□ -0.75
CSMD1-212ENST00000523387 LGR6Q9HBX8 967 aa10.37□□□□□ -0.75
CSMD1-212ENST00000523387 PPP2R2CQ9Y2T4 447 aa10.37□□□□□ -0.75
CSMD1-212ENST00000523387 PHLPP2Q6ZVD8 1323 aa10.37□□□□□ -0.75
CSMD1-212ENST00000523387 KCNQ3O43525 872 aa10.37□□□□□ -0.75
CSMD1-212ENST00000523387 CDKL5O76039 1030 aa10.37□□□□□ -0.75
CSMD1-212ENST00000523387 ST3GAL1Q11201 340 aa10.37□□□□□ -0.75
CSMD1-212ENST00000523387 NSUN7Q8NE18 718 aaKnown RBP10.37□□□□□ -0.75
CSMD1-212ENST00000523387 SMARCC1Q92922 1105 aaPredicted RBP10.37□□□□□ -0.75
CSMD1-212ENST00000523387 PFKFB2O60825 505 aa10.37□□□□□ -0.75
CSMD1-212ENST00000523387 GIGYF1O75420 1035 aaPredicted RBP10.37□□□□□ -0.75
CSMD1-212ENST00000523387 WDHD1O75717 1129 aaPredicted RBP10.37□□□□□ -0.75
CSMD1-212ENST00000523387 PSME1Q06323 249 aa10.37□□□□□ -0.75
CSMD1-212ENST00000523387 TFCP2Q12800 502 aa10.37□□□□□ -0.75
CSMD1-212ENST00000523387 ZNF569Q5MCW4 686 aa10.37□□□□□ -0.75
CSMD1-212ENST00000523387 PCMTD1Q96MG8 357 aaPredicted RBP10.37□□□□□ -0.75
CSMD1-212ENST00000523387 DESI2Q9BSY9 194 aa10.37□□□□□ -0.75
CSMD1-212ENST00000523387 RAI14Q9P0K7 980 aa10.37□□□□□ -0.75
CSMD1-212ENST00000523387 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.37□□□□□ -0.75
CSMD1-212ENST00000523387 NEURL4Q96JN8 1562 aa10.37□□□□□ -0.75
CSMD1-212ENST00000523387 SBNO1A3KN83 1393 aa10.37□□□□□ -0.75
CSMD1-212ENST00000523387 PTPRMP28827 1452 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 CD163L1Q9NR16 1453 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 A0A1B0GUL7 405 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 ATP1A3P13637 1013 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 EIF4A1P60842 406 aaKnown RBP10.36□□□□□ -0.75
CSMD1-212ENST00000523387 ANO1Q5XXA6 986 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 ARMCX5Q6P1M9 558 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 CEP112Q8N8E3 955 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 GOLGA5Q8TBA6 731 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 CRB1P82279 1406 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 CTAGE15A4D2H0 777 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 CYP21A2P08686 494 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 CTAGE8P0CG41 777 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 ADKP55263 362 aaKnown RBP10.36□□□□□ -0.75
CSMD1-212ENST00000523387 CTAGE6Q86UF2 777 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 CTAGE4Q8IX94 777 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 DBNDD2Q9BQY9 259 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 SNRKQ9NRH2 765 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 BABAM1Q9NWV8 329 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 TAF6LQ9Y6J9 622 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 MYO1CO00159 1063 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 TTC39AQ5SRH9 613 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 BRAPQ7Z569 592 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 ALG1Q9BT22 464 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 CLIC4Q9Y696 253 aa10.36□□□□□ -0.75
CSMD1-212ENST00000523387 ATP8B1O43520 1251 aa10.35□□□□□ -0.75
CSMD1-212ENST00000523387 PFKFB1P16118 471 aa10.35□□□□□ -0.75
CSMD1-212ENST00000523387 HOXC9P31274 260 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms