RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 HLA-DOAP06340 250 aa13.97□□□□□ -0.17
EXTL3-214ENST00000523271 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.97□□□□□ -0.17
EXTL3-214ENST00000523271 PAXIP1Q6ZW49 1069 aaPredicted RBP13.97□□□□□ -0.17
EXTL3-214ENST00000523271 NEK11Q8NG66 645 aa13.97□□□□□ -0.17
EXTL3-214ENST00000523271 CCDC42Q96M95 316 aa13.97□□□□□ -0.17
EXTL3-214ENST00000523271 PPANQ9NQ55 473 aaKnown RBP13.97□□□□□ -0.17
EXTL3-214ENST00000523271 ADAMTS8Q9UP79 889 aa13.97□□□□□ -0.17
EXTL3-214ENST00000523271 KRT3P12035 628 aa13.97□□□□□ -0.17
EXTL3-214ENST00000523271 SLC8A3P57103 927 aa13.97□□□□□ -0.17
EXTL3-214ENST00000523271 ATP2A3Q93084 1043 aa13.97□□□□□ -0.17
EXTL3-214ENST00000523271 IARSP41252 1262 aaKnown RBP13.97□□□□□ -0.17
EXTL3-214ENST00000523271 MUM1L1Q5H9M0 696 aa13.97□□□□□ -0.17
EXTL3-214ENST00000523271 MCM10Q7L590 875 aa13.97□□□□□ -0.17
EXTL3-214ENST00000523271 AFG3L2Q9Y4W6 797 aa13.97□□□□□ -0.17
EXTL3-214ENST00000523271 PALM3A6NDB9 673 aaPredicted RBP13.97□□□□□ -0.17
EXTL3-214ENST00000523271 BAG3O95817 575 aa13.97□□□□□ -0.17
EXTL3-214ENST00000523271 SYF2O95926 243 aaKnown RBP13.97□□□□□ -0.17
EXTL3-214ENST00000523271 TOM1L2Q6ZVM7 507 aa13.97□□□□□ -0.17
EXTL3-214ENST00000523271 CAPZA3Q96KX2 299 aa13.97□□□□□ -0.17
EXTL3-214ENST00000523271 RAD54L2Q9Y4B4 1467 aa13.97□□□□□ -0.17
EXTL3-214ENST00000523271 RNF8O76064 485 aa13.97□□□□□ -0.17
EXTL3-214ENST00000523271 KRBA2Q6ZNG9 492 aa13.97□□□□□ -0.17
EXTL3-214ENST00000523271 KCNG4Q8TDN1 519 aa13.97□□□□□ -0.17
EXTL3-214ENST00000523271 KIFAP3Q92845 792 aa13.97□□□□□ -0.17
EXTL3-214ENST00000523271 ATAD2BQ9ULI0 1458 aa13.96□□□□□ -0.17
EXTL3-214ENST00000523271 TLDC2A0PJX2 215 aa13.96□□□□□ -0.17
EXTL3-214ENST00000523271 FAM204AQ9H8W3 233 aa13.96□□□□□ -0.17
EXTL3-214ENST00000523271 PLCB1Q9NQ66 1216 aa13.96□□□□□ -0.17
EXTL3-214ENST00000523271 FAM160A1Q05DH4 1040 aa13.96□□□□□ -0.17
EXTL3-214ENST00000523271 LGSNQ5TDP6 509 aa13.96□□□□□ -0.17
EXTL3-214ENST00000523271 SYT1P21579 422 aa13.96□□□□□ -0.18
EXTL3-214ENST00000523271 CABP5Q9NP86 173 aa13.96□□□□□ -0.18
EXTL3-214ENST00000523271 PTGS1P23219 599 aa13.95□□□□□ -0.18
EXTL3-214ENST00000523271 BIRC2Q13490 618 aa13.95□□□□□ -0.18
EXTL3-214ENST00000523271 RRAGBQ5VZM2 374 aa13.95□□□□□ -0.18
EXTL3-214ENST00000523271 SDCCAG3Q96C92 435 aa13.95□□□□□ -0.18
EXTL3-214ENST00000523271 TMEM67Q5HYA8 995 aa13.95□□□□□ -0.18
EXTL3-214ENST00000523271 METAP2P50579 478 aaKnown RBP eCLIP13.95□□□□□ -0.18
EXTL3-214ENST00000523271 SPECC1L-ADORA2AF8WAN1 911 aa13.95□□□□□ -0.18
EXTL3-214ENST00000523271 CHMP2AO43633 222 aa13.95□□□□□ -0.18
EXTL3-214ENST00000523271 CASKIN1Q8WXD9 1431 aa13.95□□□□□ -0.18
EXTL3-214ENST00000523271 HFM1A2PYH4 1435 aa13.95□□□□□ -0.18
EXTL3-214ENST00000523271 MUM1Q2TAK8 710 aa13.95□□□□□ -0.18
EXTL3-214ENST00000523271 ZNF530Q6P9A1 599 aaPredicted RBP13.95□□□□□ -0.18
EXTL3-214ENST00000523271 TOP2BQ02880 1626 aa13.95□□□□□ -0.18
EXTL3-214ENST00000523271 TERF1P54274 439 aa13.94□□□□□ -0.18
EXTL3-214ENST00000523271 OGFRQ9NZT2 677 aa13.94□□□□□ -0.18
EXTL3-214ENST00000523271 NDUFAB1O14561 156 aa13.94□□□□□ -0.18
EXTL3-214ENST00000523271 LUC7L3O95232 432 aaKnown RBP13.94□□□□□ -0.18
EXTL3-214ENST00000523271 GABPAQ06546 454 aa13.94□□□□□ -0.18
EXTL3-214ENST00000523271 SIRT1Q96EB6 747 aa13.94□□□□□ -0.18
EXTL3-214ENST00000523271 SPC25Q9HBM1 224 aa13.94□□□□□ -0.18
EXTL3-214ENST00000523271 HMG20BQ9P0W2 317 aa13.94□□□□□ -0.18
EXTL3-214ENST00000523271 DIXDC1Q155Q3 683 aa13.94□□□□□ -0.18
EXTL3-214ENST00000523271 DPH6Q7L8W6 267 aa13.94□□□□□ -0.18
EXTL3-214ENST00000523271 NOLC1Q14978 699 aaKnown RBP eCLIP13.94□□□□□ -0.18
EXTL3-214ENST00000523271 MFSD6Q6ZSS7 791 aa13.94□□□□□ -0.18
EXTL3-214ENST00000523271 DDX54Q8TDD1 881 aaKnown RBP13.94□□□□□ -0.18
EXTL3-214ENST00000523271 GJB2P29033 226 aa13.94□□□□□ -0.18
EXTL3-214ENST00000523271 CDR2Q01850 454 aa13.94□□□□□ -0.18
EXTL3-214ENST00000523271 IFIT5Q13325 482 aaKnown RBP13.94□□□□□ -0.18
EXTL3-214ENST00000523271 RPGRQ92834 1020 aaKnown RBP13.94□□□□□ -0.18
EXTL3-214ENST00000523271 PHEXP78562 749 aa13.93□□□□□ -0.18
EXTL3-214ENST00000523271 ESCO1Q5FWF5 840 aa13.93□□□□□ -0.18
EXTL3-214ENST00000523271 TMEM57Q8N5G2 664 aa13.93□□□□□ -0.18
EXTL3-214ENST00000523271 CABP2Q9NPB3 220 aa13.93□□□□□ -0.18
EXTL3-214ENST00000523271 FAF1Q9UNN5 650 aaPredicted RBP13.93□□□□□ -0.18
EXTL3-214ENST00000523271 TUBB2AQ13885 445 aa13.93□□□□□ -0.18
EXTL3-214ENST00000523271 PHLDB3Q6NSJ2 640 aa13.93□□□□□ -0.18
EXTL3-214ENST00000523271 UBL4BQ8N7F7 174 aa13.93□□□□□ -0.18
EXTL3-214ENST00000523271 TUBB2BQ9BVA1 445 aa13.93□□□□□ -0.18
EXTL3-214ENST00000523271 HMGB3O15347 200 aaKnown RBP13.93□□□□□ -0.18
EXTL3-214ENST00000523271 ARID5AQ03989 594 aa13.93□□□□□ -0.18
EXTL3-214ENST00000523271 LRRC43Q8N309 656 aa13.93□□□□□ -0.18
EXTL3-214ENST00000523271 IL1RAPL2Q9NP60 686 aa13.93□□□□□ -0.18
EXTL3-214ENST00000523271 HPDP32754 393 aaPredicted RBP13.93□□□□□ -0.18
EXTL3-214ENST00000523271 PPP1R21Q6ZMI0 780 aa13.93□□□□□ -0.18
EXTL3-214ENST00000523271 OPHN1O60890 802 aa13.93□□□□□ -0.18
EXTL3-214ENST00000523271 RAP1GDS1P52306 607 aa13.93□□□□□ -0.18
EXTL3-214ENST00000523271 CCT2P78371 535 aaKnown RBP13.93□□□□□ -0.18
EXTL3-214ENST00000523271 HSP90AA5PQ58FG0 334 aa13.93□□□□□ -0.18
EXTL3-214ENST00000523271 ISM2Q6H9L7 571 aa13.93□□□□□ -0.18
EXTL3-214ENST00000523271 RUFY4Q6ZNE9 571 aa13.93□□□□□ -0.18
EXTL3-214ENST00000523271 CCDC125Q86Z20 511 aa13.93□□□□□ -0.18
EXTL3-214ENST00000523271 VSIG1Q86XK7 387 aa13.92□□□□□ -0.18
EXTL3-214ENST00000523271 CNGA4Q8IV77 575 aa13.92□□□□□ -0.18
EXTL3-214ENST00000523271 C6orf50Q9HD87 102 aa13.92□□□□□ -0.18
EXTL3-214ENST00000523271 BAG5Q9UL15 447 aa13.92□□□□□ -0.18
EXTL3-214ENST00000523271 CCT6AP40227 531 aaKnown RBP13.92□□□□□ -0.18
EXTL3-214ENST00000523271 TAF7Q15545 349 aaPredicted RBP13.92□□□□□ -0.18
EXTL3-214ENST00000523271 AP1ARQ63HQ0 302 aa13.92□□□□□ -0.18
EXTL3-214ENST00000523271 TRMT1LQ7Z2T5 733 aaKnown RBP13.92□□□□□ -0.18
EXTL3-214ENST00000523271 TSPY2A6NKD2 308 aa13.92□□□□□ -0.18
EXTL3-214ENST00000523271 LARSQ9P2J5 1176 aaKnown RBP13.92□□□□□ -0.18
EXTL3-214ENST00000523271 DHX29Q7Z478 1369 aaKnown RBP13.92□□□□□ -0.18
EXTL3-214ENST00000523271 MAP2K2P36507 400 aa13.92□□□□□ -0.18
EXTL3-214ENST00000523271 DBN1Q16643 649 aa13.92□□□□□ -0.18
EXTL3-214ENST00000523271 MORC4Q8TE76 937 aa13.92□□□□□ -0.18
EXTL3-214ENST00000523271 VTI1AQ96AJ9 217 aa13.92□□□□□ -0.18
EXTL3-214ENST00000523271 LRRC9Q6ZRR7 1453 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms