RNA–Protein interactions for RNA: ENST00000523263.1

VIRMA-208, Transcript of vir like m6A methyltransferase associated, humanhuman

TSL 3

Gene VIRMA, Length 609 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIRMA-208ENST00000523263 COA1Q9GZY4 146 aa12.26□□□□□ -0.45
VIRMA-208ENST00000523263 BSDC1Q9NW68 430 aaPredicted RBP12.26□□□□□ -0.45
VIRMA-208ENST00000523263 SCN9AQ15858 1988 aa12.26□□□□□ -0.45
VIRMA-208ENST00000523263 MANSC4A6NHS7 340 aaPredicted RBP12.25□□□□□ -0.45
VIRMA-208ENST00000523263 TTLL12Q14166 644 aaPredicted RBP12.25□□□□□ -0.45
VIRMA-208ENST00000523263 PRAMEF18Q5VWM3 479 aa12.25□□□□□ -0.45
VIRMA-208ENST00000523263 APOBEC3FQ8IUX4 373 aaKnown RBP12.25□□□□□ -0.45
VIRMA-208ENST00000523263 RUNDC1Q96C34 613 aa12.25□□□□□ -0.45
VIRMA-208ENST00000523263 ZBED3Q96IU2 234 aaPredicted RBP12.25□□□□□ -0.45
VIRMA-208ENST00000523263 CHMP4AQ9BY43 222 aa12.25□□□□□ -0.45
VIRMA-208ENST00000523263 R3HDMLQ9H3Y0 253 aa12.25□□□□□ -0.45
VIRMA-208ENST00000523263 CWC25Q9NXE8 425 aaPredicted RBP12.25□□□□□ -0.45
VIRMA-208ENST00000523263 ZNF853P0CG23 659 aa12.24□□□□□ -0.45
VIRMA-208ENST00000523263 ZBTB48P10074 688 aaPredicted RBP12.24□□□□□ -0.45
VIRMA-208ENST00000523263 MYD88Q99836 296 aa12.24□□□□□ -0.45
VIRMA-208ENST00000523263 METTL22Q9BUU2 404 aaPredicted RBP12.24□□□□□ -0.45
VIRMA-208ENST00000523263 MINPP1Q9UNW1 487 aa12.24□□□□□ -0.45
VIRMA-208ENST00000523263 LEMD3Q9Y2U8 911 aa12.24□□□□□ -0.45
VIRMA-208ENST00000523263 LAS1LQ9Y4W2 734 aaKnown RBP12.24□□□□□ -0.45
VIRMA-208ENST00000523263 CCT4P50991 539 aaKnown RBP12.23□□□□□ -0.45
VIRMA-208ENST00000523263 NEUROD2Q15784 382 aa12.23□□□□□ -0.45
VIRMA-208ENST00000523263 OTOP1Q7RTM1 612 aa12.23□□□□□ -0.45
VIRMA-208ENST00000523263 IFNL1Q8IU54 200 aa12.23□□□□□ -0.45
VIRMA-208ENST00000523263 TTLL11Q8NHH1 800 aa12.23□□□□□ -0.45
VIRMA-208ENST00000523263 PHAXQ9H814 394 aaKnown RBP12.23□□□□□ -0.45
VIRMA-208ENST00000523263 SCAF8Q9UPN6 1271 aaKnown RBP12.23□□□□□ -0.45
VIRMA-208ENST00000523263 COL1A1P02452 1464 aaPredicted RBP12.22□□□□□ -0.45
VIRMA-208ENST00000523263 DDX58O95786 925 aaKnown RBP12.22□□□□□ -0.45
VIRMA-208ENST00000523263 CTSWP56202 376 aa12.22□□□□□ -0.45
VIRMA-208ENST00000523263 MTMR14Q8NCE2 650 aa12.22□□□□□ -0.45
VIRMA-208ENST00000523263 ARMC5Q96C12 935 aa12.22□□□□□ -0.45
VIRMA-208ENST00000523263 SLC10A4Q96EP9 437 aa12.22□□□□□ -0.45
VIRMA-208ENST00000523263 MBIPQ9NS73 344 aa12.22□□□□□ -0.45
VIRMA-208ENST00000523263 TRIM17Q9Y577 477 aa12.22□□□□□ -0.45
VIRMA-208ENST00000523263 PPP2R3BQ9Y5P8 575 aa12.22□□□□□ -0.45
VIRMA-208ENST00000523263 PSME4Q14997 1843 aa12.21□□□□□ -0.45
VIRMA-208ENST00000523263 WTIPA6NIX2 430 aaPredicted RBP12.21□□□□□ -0.45
VIRMA-208ENST00000523263 MKRN3Q13064 507 aaKnown RBP12.21□□□□□ -0.45
VIRMA-208ENST00000523263 TTLL5Q6EMB2 1281 aa12.21□□□□□ -0.45
VIRMA-208ENST00000523263 ERO1AQ96HE7 468 aa12.21□□□□□ -0.45
VIRMA-208ENST00000523263 ANGEL1Q9UNK9 670 aaKnown RBP12.21□□□□□ -0.45
VIRMA-208ENST00000523263 PTPN22Q9Y2R2 807 aa12.21□□□□□ -0.45
VIRMA-208ENST00000523263 TESPA1A2RU30 521 aaPredicted RBP12.2□□□□□ -0.46
VIRMA-208ENST00000523263 POTEFA5A3E0 1075 aa12.2□□□□□ -0.46
VIRMA-208ENST00000523263 PPP1R12BO60237 982 aaPredicted RBP12.2□□□□□ -0.46
VIRMA-208ENST00000523263 SASH1O94885 1247 aa12.2□□□□□ -0.46
VIRMA-208ENST00000523263 OTUD7BQ6GQQ9 843 aa12.2□□□□□ -0.46
VIRMA-208ENST00000523263 CCDC85AQ96PX6 553 aaPredicted RBP12.2□□□□□ -0.46
VIRMA-208ENST00000523263 MXD3Q9BW11 206 aa12.2□□□□□ -0.46
VIRMA-208ENST00000523263 DEFB129Q9H1M3 183 aa12.2□□□□□ -0.46
VIRMA-208ENST00000523263 IFT57Q9NWB7 429 aa12.2□□□□□ -0.46
VIRMA-208ENST00000523263 GNAI1P63096 354 aa12.19□□□□□ -0.46
VIRMA-208ENST00000523263 CALD1Q05682 793 aaKnown RBP12.19□□□□□ -0.46
VIRMA-208ENST00000523263 TXNRD3Q86VQ6 643 aa12.19□□□□□ -0.46
VIRMA-208ENST00000523263 CCDC146Q8IYE0 955 aa12.19□□□□□ -0.46
VIRMA-208ENST00000523263 WNK4Q96J92 1243 aa12.19□□□□□ -0.46
VIRMA-208ENST00000523263 PLA2G12BQ9BX93 195 aa12.19□□□□□ -0.46
VIRMA-208ENST00000523263 ANKRD2Q9GZV1 360 aa12.19□□□□□ -0.46
VIRMA-208ENST00000523263 GREM2Q9H772 168 aa12.19□□□□□ -0.46
VIRMA-208ENST00000523263 ZNF804BA4D1E1 1349 aa12.18□□□□□ -0.46
VIRMA-208ENST00000523263 IGF2BP3O00425 579 aaKnown RBP eCLIP12.18□□□□□ -0.46
VIRMA-208ENST00000523263 IGKV5-2P06315 115 aa12.18□□□□□ -0.46
VIRMA-208ENST00000523263 PRKG1Q13976 671 aa12.18□□□□□ -0.46
VIRMA-208ENST00000523263 SUPT20HL1Q3ZLR7 823 aa12.18□□□□□ -0.46
VIRMA-208ENST00000523263 CCDC30Q5VVM6 783 aa12.18□□□□□ -0.46
VIRMA-208ENST00000523263 KSR2Q6VAB6 950 aa12.18□□□□□ -0.46
VIRMA-208ENST00000523263 C15orf52Q6ZUT6 534 aaKnown RBP12.18□□□□□ -0.46
VIRMA-208ENST00000523263 KIAA0825Q8IV33 1275 aa12.18□□□□□ -0.46
VIRMA-208ENST00000523263 JARID2Q92833 1246 aaPredicted RBP12.18□□□□□ -0.46
VIRMA-208ENST00000523263 MYBBP1AQ9BQG0 1328 aaKnown RBP12.17□□□□□ -0.46
VIRMA-208ENST00000523263 H7C1W4 665 aa12.17□□□□□ -0.46
VIRMA-208ENST00000523263 IGHMBP2P38935 993 aaKnown RBP12.17□□□□□ -0.46
VIRMA-208ENST00000523263 FXR1P51114 621 aaKnown RBP eCLIP12.17□□□□□ -0.464e-7■■■■□ 19.8
VIRMA-208ENST00000523263 FKBP1AP62942 108 aaKnown RBP12.17□□□□□ -0.46
VIRMA-208ENST00000523263 WDR43Q15061 677 aaKnown RBP eCLIP12.17□□□□□ -0.46
VIRMA-208ENST00000523263 DLGAP5Q15398 846 aa12.17□□□□□ -0.46
VIRMA-208ENST00000523263 FBXW7Q969H0 707 aa12.17□□□□□ -0.46
VIRMA-208ENST00000523263 EFCC1Q9HA90 598 aa12.17□□□□□ -0.46
VIRMA-208ENST00000523263 ADAMTS8Q9UP79 889 aa12.17□□□□□ -0.46
VIRMA-208ENST00000523263 MAP3K2Q9Y2U5 619 aa12.17□□□□□ -0.46
VIRMA-208ENST00000523263 CSF1RP07333 972 aa12.16□□□□□ -0.46
VIRMA-208ENST00000523263 IREB2P48200 963 aaKnown RBP12.16□□□□□ -0.46
VIRMA-208ENST00000523263 GTF2IP78347 998 aa12.16□□□□□ -0.46
VIRMA-208ENST00000523263 SP3Q02447 781 aa12.16□□□□□ -0.46
VIRMA-208ENST00000523263 NEXNQ0ZGT2 675 aa12.16□□□□□ -0.46
VIRMA-208ENST00000523263 ARHGEF6Q15052 776 aa12.16□□□□□ -0.46
VIRMA-208ENST00000523263 CLMNQ96JQ2 1002 aa12.16□□□□□ -0.46
VIRMA-208ENST00000523263 CD209Q9NNX6 404 aa12.16□□□□□ -0.46
VIRMA-208ENST00000523263 PI4KAP2A4QPH2 592 aa12.15□□□□□ -0.46
VIRMA-208ENST00000523263 MYO1BO43795 1136 aa12.15□□□□□ -0.46
VIRMA-208ENST00000523263 USP2O75604 605 aaPredicted RBP12.15□□□□□ -0.46
VIRMA-208ENST00000523263 EN2P19622 333 aaPredicted RBP12.15□□□□□ -0.46
VIRMA-208ENST00000523263 CRHR2Q13324 411 aa12.15□□□□□ -0.46
VIRMA-208ENST00000523263 ANKRD13AQ8IZ07 590 aa12.15□□□□□ -0.46
VIRMA-208ENST00000523263 PI4KAP1Q8N8J0 262 aa12.15□□□□□ -0.46
VIRMA-208ENST00000523263 C8orf58Q8NAV2 365 aa12.15□□□□□ -0.46
VIRMA-208ENST00000523263 CD99L2Q8TCZ2 262 aa12.15□□□□□ -0.46
VIRMA-208ENST00000523263 ZNF333Q96JL9 665 aa12.15□□□□□ -0.46
VIRMA-208ENST00000523263 TMEM106CQ9BVX2 250 aa12.15□□□□□ -0.46
VIRMA-208ENST00000523263 IRS2Q9Y4H2 1338 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms