RNA–Protein interactions for RNA: ENST00000523240.5

HDAC2-214, Transcript of histone deacetylase 2, humanhuman

TSL 5

Gene HDAC2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-214ENST00000523240 TXNRD3Q86VQ6 643 aa28.17■■■□□ 2.1
HDAC2-214ENST00000523240 FTSJ3Q8IY81 847 aaKnown RBP28.17■■■□□ 2.1
HDAC2-214ENST00000523240 MEIS3Q99687 375 aa28.17■■■□□ 2.1
HDAC2-214ENST00000523240 PUS3Q9BZE2 481 aaKnown RBP28.17■■■□□ 2.1
HDAC2-214ENST00000523240 LRRFIP2Q9Y608 721 aaKnown RBP28.17■■■□□ 2.1
HDAC2-214ENST00000523240 MROH5Q6ZUA9 1318 aa28.17■■■□□ 2.1
HDAC2-214ENST00000523240 SNAP23O00161 211 aa28.16■■■□□ 2.1
HDAC2-214ENST00000523240 RSBN1LQ6PCB5 846 aaPredicted RBP28.16■■■□□ 2.1
HDAC2-214ENST00000523240 CNTROBQ8N137 903 aa28.16■■■□□ 2.1
HDAC2-214ENST00000523240 METTL24Q5JXM2 366 aa28.15■■■□□ 2.1
HDAC2-214ENST00000523240 ZNF804AQ7Z570 1209 aa28.15■■■□□ 2.1
HDAC2-214ENST00000523240 TNNQ9UQP3 1299 aa28.15■■■□□ 2.1
HDAC2-214ENST00000523240 SHTN1A0MZ66 631 aa28.14■■■□□ 2.1
HDAC2-214ENST00000523240 HTRA3P83110 453 aa28.14■■■□□ 2.1
HDAC2-214ENST00000523240 AGBL3Q8NEM8 1001 aa28.14■■■□□ 2.1
HDAC2-214ENST00000523240 KLHDC4Q8TBB5 520 aa28.13■■■□□ 2.09
HDAC2-214ENST00000523240 TRPM4Q8TD43 1214 aa28.13■■■□□ 2.09
HDAC2-214ENST00000523240 RIPOR2Q9Y4F9 1068 aa28.13■■■□□ 2.09
HDAC2-214ENST00000523240 UBE4AQ14139 1066 aa28.12■■■□□ 2.09
HDAC2-214ENST00000523240 TBC1D10BQ4KMP7 808 aaPredicted RBP28.12■■■□□ 2.09
HDAC2-214ENST00000523240 LRRC24Q50LG9 513 aa28.12■■■□□ 2.09
HDAC2-214ENST00000523240 RBM26Q5T8P6 1007 aaKnown RBP28.12■■■□□ 2.09
HDAC2-214ENST00000523240 C15orf52Q6ZUT6 534 aaKnown RBP28.12■■■□□ 2.09
HDAC2-214ENST00000523240 STRIP1Q5VSL9 837 aa28.11■■■□□ 2.09
HDAC2-214ENST00000523240 SAMD7Q7Z3H4 446 aa28.11■■■□□ 2.09
HDAC2-214ENST00000523240 CD209Q9NNX6 404 aa28.11■■■□□ 2.09
HDAC2-214ENST00000523240 MYO3BQ8WXR4 1341 aa28.11■■■□□ 2.09
HDAC2-214ENST00000523240 ZNF609O15014 1411 aa28.1■■■□□ 2.09
HDAC2-214ENST00000523240 ITGBL1O95965 494 aaPredicted RBP28.1■■■□□ 2.09
HDAC2-214ENST00000523240 TTLL5Q6EMB2 1281 aa28.1■■■□□ 2.09
HDAC2-214ENST00000523240 TMEM57Q8N5G2 664 aa28.1■■■□□ 2.09
HDAC2-214ENST00000523240 PASKQ96RG2 1323 aa28.1■■■□□ 2.09
HDAC2-214ENST00000523240 GTF2IP78347 998 aa28.09■■■□□ 2.09
HDAC2-214ENST00000523240 KIF4BQ2VIQ3 1234 aa28.09■■■□□ 2.09
HDAC2-214ENST00000523240 DZIP1LQ8IYY4 767 aaKnown RBP28.09■■■□□ 2.09
HDAC2-214ENST00000523240 ZC3H15Q8WU90 426 aaKnown RBP28.09■■■□□ 2.09
HDAC2-214ENST00000523240 TRPM7Q96QT4 1865 aa28.08■■■□□ 2.09
HDAC2-214ENST00000523240 USP17L8P0C7I0 530 aa28.08■■■□□ 2.09
HDAC2-214ENST00000523240 DACT2Q5SW24 774 aa28.08■■■□□ 2.09
HDAC2-214ENST00000523240 ZNF646O15015 1829 aaPredicted RBP28.08■■■□□ 2.09
HDAC2-214ENST00000523240 EYA2O00167 538 aa28.07■■■□□ 2.08
HDAC2-214ENST00000523240 GNAI2P04899 355 aa28.07■■■□□ 2.08
HDAC2-214ENST00000523240 RFX5P48382 616 aaPredicted RBP28.07■■■□□ 2.08
HDAC2-214ENST00000523240 HIRAP54198 1017 aaPredicted RBP28.07■■■□□ 2.08
HDAC2-214ENST00000523240 VPS37DQ86XT2 251 aa28.07■■■□□ 2.08
HDAC2-214ENST00000523240 ITPRIPQ8IWB1 547 aa28.07■■■□□ 2.08
HDAC2-214ENST00000523240 OGFOD1Q8N543 542 aa28.07■■■□□ 2.08
HDAC2-214ENST00000523240 SIL1Q9H173 461 aa28.07■■■□□ 2.08
HDAC2-214ENST00000523240 CREBZFQ9NS37 354 aa28.07■■■□□ 2.08
HDAC2-214ENST00000523240 PDE8BO95263 885 aa28.06■■■□□ 2.08
HDAC2-214ENST00000523240 PTPN12Q05209 780 aaKnown RBP28.06■■■□□ 2.08
HDAC2-214ENST00000523240 IRS2Q9Y4H2 1338 aa28.06■■■□□ 2.08
HDAC2-214ENST00000523240 POLR2AP24928 1970 aaKnown RBP28.06■■■□□ 2.08
HDAC2-214ENST00000523240 CEP350Q5VT06 3117 aa28.05■■■□□ 2.08
HDAC2-214ENST00000523240 TMEM88BA6NKF7 163 aa28.05■■■□□ 2.08
HDAC2-214ENST00000523240 GMLQ99445 158 aa28.05■■■□□ 2.08
HDAC2-214ENST00000523240 MXD3Q9BW11 206 aa28.05■■■□□ 2.08
HDAC2-214ENST00000523240 SRGAP3O43295 1099 aa28.04■■■□□ 2.08
HDAC2-214ENST00000523240 HIBADHP31937 336 aaKnown RBP28.04■■■□□ 2.08
HDAC2-214ENST00000523240 GYG1P46976 350 aa28.04■■■□□ 2.08
HDAC2-214ENST00000523240 FBXO3Q9UK99 471 aa28.04■■■□□ 2.08
HDAC2-214ENST00000523240 EGFRP00533 1210 aa28.03■■■□□ 2.08
HDAC2-214ENST00000523240 IFIT1P09914 478 aaKnown RBP28.03■■■□□ 2.08
HDAC2-214ENST00000523240 IL1R1P14778 569 aa28.03■■■□□ 2.08
HDAC2-214ENST00000523240 ZNF280AP59817 542 aaPredicted RBP28.03■■■□□ 2.08
HDAC2-214ENST00000523240 PUM3Q15397 648 aaKnown RBP28.03■■■□□ 2.08
HDAC2-214ENST00000523240 CAVIN4Q5BKX8 364 aa28.03■■■□□ 2.08
HDAC2-214ENST00000523240 DCPSQ96C86 337 aaKnown RBP28.03■■■□□ 2.08
HDAC2-214ENST00000523240 KLRG1Q96E93 195 aa28.03■■■□□ 2.08
HDAC2-214ENST00000523240 MYOZ2Q9NPC6 264 aa28.03■■■□□ 2.08
HDAC2-214ENST00000523240 HDAC9Q9UKV0 1011 aa28.03■■■□□ 2.08
HDAC2-214ENST00000523240 MS4A1P11836 297 aa28.02■■■□□ 2.08
HDAC2-214ENST00000523240 CDC37L1Q7L3B6 337 aa28.02■■■□□ 2.08
HDAC2-214ENST00000523240 VGLL2Q8N8G2 317 aa28.02■■■□□ 2.08
HDAC2-214ENST00000523240 GLIS2Q9BZE0 524 aaPredicted RBP28.02■■■□□ 2.08
HDAC2-214ENST00000523240 PGAP2Q9UHJ9 254 aa28.02■■■□□ 2.08
HDAC2-214ENST00000523240 RCAN3Q9UKA8 241 aa28.02■■■□□ 2.08
HDAC2-214ENST00000523240 TRAF5O00463 557 aa28.01■■■□□ 2.07
HDAC2-214ENST00000523240 FRAT2O75474 233 aaPredicted RBP28.01■■■□□ 2.07
HDAC2-214ENST00000523240 CIAO1O76071 339 aa28.01■■■□□ 2.07
HDAC2-214ENST00000523240 KIAA0825Q8IV33 1275 aa28.01■■■□□ 2.07
HDAC2-214ENST00000523240 DNAJC5GQ8N7S2 189 aa28.01■■■□□ 2.07
HDAC2-214ENST00000523240 CEP126Q9P2H0 1117 aa28.01■■■□□ 2.07
HDAC2-214ENST00000523240 PA2G4Q9UQ80 394 aaKnown RBP28.01■■■□□ 2.07
HDAC2-214ENST00000523240 MYH13Q9UKX3 1938 aa28■■■□□ 2.07
HDAC2-214ENST00000523240 SLC5A1P13866 664 aa28■■■□□ 2.07
HDAC2-214ENST00000523240 FAM84BQ96KN1 310 aaPredicted RBP28■■■□□ 2.07
HDAC2-214ENST00000523240 JAG2Q9Y219 1238 aa28■■■□□ 2.07
HDAC2-214ENST00000523240 RLBP1P12271 317 aa27.99■■■□□ 2.07
HDAC2-214ENST00000523240 IL15P40933 162 aaPredicted RBP27.99■■■□□ 2.07
HDAC2-214ENST00000523240 MMP14P50281 582 aa27.99■■■□□ 2.07
HDAC2-214ENST00000523240 KRT26Q7Z3Y9 468 aa27.99■■■□□ 2.07
HDAC2-214ENST00000523240 COPRSQ9NQ92 184 aa27.99■■■□□ 2.07
HDAC2-214ENST00000523240 GGA3Q9NZ52 723 aa27.99■■■□□ 2.07
HDAC2-214ENST00000523240 ABT1Q9ULW3 272 aaKnown RBP27.99■■■□□ 2.07
HDAC2-214ENST00000523240 FMR1Q06787 632 aaKnown RBP eCLIP27.98■■■□□ 2.07
HDAC2-214ENST00000523240 MTX1Q13505 466 aa27.98■■■□□ 2.07
HDAC2-214ENST00000523240 ATG9AQ7Z3C6 839 aa27.98■■■□□ 2.07
HDAC2-214ENST00000523240 USP48Q86UV5 1035 aa27.98■■■□□ 2.07
HDAC2-214ENST00000523240 ZNF408Q9H9D4 720 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms