RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 RTFDC1Q9BY42 306 aaPredicted RBP20.01■□□□□ 0.79
LSM1-204ENST00000522515 TLR7Q9NYK1 1049 aaKnown RBP20.01■□□□□ 0.79
LSM1-204ENST00000522515 FER1L6Q2WGJ9 1857 aa20■□□□□ 0.79
LSM1-204ENST00000522515 IFIT1P09914 478 aaKnown RBP20■□□□□ 0.79
LSM1-204ENST00000522515 SLC5A1P13866 664 aa20■□□□□ 0.79
LSM1-204ENST00000522515 ADORA1P30542 326 aa20■□□□□ 0.79
LSM1-204ENST00000522515 TXNRD3Q86VQ6 643 aa20■□□□□ 0.79
LSM1-204ENST00000522515 DBNLQ9UJU6 430 aaKnown RBP20■□□□□ 0.79
LSM1-204ENST00000522515 IRS2Q9Y4H2 1338 aa20■□□□□ 0.79
LSM1-204ENST00000522515 NFKBIEO00221 500 aa20■□□□□ 0.79
LSM1-204ENST00000522515 OTUD7AQ8TE49 926 aaPredicted RBP20■□□□□ 0.79
LSM1-204ENST00000522515 XAGE2Q96GT9 111 aa20■□□□□ 0.79
LSM1-204ENST00000522515 PSMD1Q99460 953 aa20■□□□□ 0.79
LSM1-204ENST00000522515 DBNDD2Q9BQY9 259 aa20■□□□□ 0.79
LSM1-204ENST00000522515 ARAP2Q8WZ64 1704 aa19.99■□□□□ 0.79
LSM1-204ENST00000522515 IFIT2P09913 472 aaKnown RBP19.99■□□□□ 0.79
LSM1-204ENST00000522515 FKBP4Q02790 459 aaKnown RBP eCLIP19.99■□□□□ 0.79
LSM1-204ENST00000522515 RIMBP2O15034 1052 aa19.98■□□□□ 0.79
LSM1-204ENST00000522515 SKAP1Q86WV1 359 aa19.98■□□□□ 0.79
LSM1-204ENST00000522515 MED23Q9ULK4 1368 aa19.97■□□□□ 0.79
LSM1-204ENST00000522515 PDE4AP27815 886 aa19.97■□□□□ 0.79
LSM1-204ENST00000522515 GYG1P46976 350 aa19.97■□□□□ 0.79
LSM1-204ENST00000522515 GPR162Q16538 588 aa19.97■□□□□ 0.79
LSM1-204ENST00000522515 WASHC4Q2M389 1173 aa19.97■□□□□ 0.79
LSM1-204ENST00000522515 C15orf52Q6ZUT6 534 aaKnown RBP19.97■□□□□ 0.79
LSM1-204ENST00000522515 SUPT20HQ8NEM7 779 aa19.97■□□□□ 0.79
LSM1-204ENST00000522515 TAOK3Q9H2K8 898 aa19.97■□□□□ 0.79
LSM1-204ENST00000522515 ARHGAP27Q6ZUM4 889 aa19.96■□□□□ 0.79
LSM1-204ENST00000522515 FAM84BQ96KN1 310 aaPredicted RBP19.96■□□□□ 0.79
LSM1-204ENST00000522515 EYA3Q99504 573 aa19.96■□□□□ 0.79
LSM1-204ENST00000522515 ZC3H12CQ9C0D7 883 aaKnown RBP19.96■□□□□ 0.79
LSM1-204ENST00000522515 ZNF277Q9NRM2 450 aaPredicted RBP19.96■□□□□ 0.79
LSM1-204ENST00000522515 UTRNP46939 3433 aa19.96■□□□□ 0.79
LSM1-204ENST00000522515 SALL3Q9BXA9 1300 aa19.96■□□□□ 0.79
LSM1-204ENST00000522515 BCAMP50895 628 aa19.95■□□□□ 0.78
LSM1-204ENST00000522515 RASSF7Q02833 373 aa19.95■□□□□ 0.78
LSM1-204ENST00000522515 GORABQ5T7V8 394 aa19.95■□□□□ 0.78
LSM1-204ENST00000522515 LTBP3Q9NS15 1303 aa19.95■□□□□ 0.78
LSM1-204ENST00000522515 AOC3Q16853 763 aa19.95■□□□□ 0.78
LSM1-204ENST00000522515 CCDC102BQ68D86 513 aa19.95■□□□□ 0.78
LSM1-204ENST00000522515 FBXO33Q7Z6M2 555 aa19.95■□□□□ 0.78
LSM1-204ENST00000522515 PHKA1P46020 1223 aa19.94■□□□□ 0.78
LSM1-204ENST00000522515 KIAA2012Q0VF49 1180 aa19.94■□□□□ 0.78
LSM1-204ENST00000522515 CAVIN4Q5BKX8 364 aa19.94■□□□□ 0.78
LSM1-204ENST00000522515 PPIP5K2O43314 1243 aa19.93■□□□□ 0.78
LSM1-204ENST00000522515 MX1P20591 662 aa19.93■□□□□ 0.78
LSM1-204ENST00000522515 HIBADHP31937 336 aaKnown RBP19.93■□□□□ 0.78
LSM1-204ENST00000522515 PRELPP51888 382 aa19.93■□□□□ 0.78
LSM1-204ENST00000522515 TSHZ3Q63HK5 1081 aa19.93■□□□□ 0.78
LSM1-204ENST00000522515 PLEKHM2Q8IWE5 1019 aa19.93■□□□□ 0.78
LSM1-204ENST00000522515 IARSP41252 1262 aaKnown RBP19.92■□□□□ 0.78
LSM1-204ENST00000522515 DOK7Q18PE1 504 aa19.92■□□□□ 0.78
LSM1-204ENST00000522515 CCDC158Q5M9N0 1113 aa19.92■□□□□ 0.78
LSM1-204ENST00000522515 ZNF804AQ7Z570 1209 aa19.92■□□□□ 0.78
LSM1-204ENST00000522515 VPS37DQ86XT2 251 aa19.92■□□□□ 0.78
LSM1-204ENST00000522515 PDE1AP54750 535 aa19.91■□□□□ 0.78
LSM1-204ENST00000522515 VPS33BQ9H267 617 aa19.91■□□□□ 0.78
LSM1-204ENST00000522515 ECHDC1Q9NTX5 307 aa19.91■□□□□ 0.78
LSM1-204ENST00000522515 COL4A5P29400 1685 aa19.91■□□□□ 0.78
LSM1-204ENST00000522515 TTC39AQ5SRH9 613 aa19.91■□□□□ 0.78
LSM1-204ENST00000522515 LARGE2Q8N3Y3 721 aa19.91■□□□□ 0.78
LSM1-204ENST00000522515 DBNDD1Q9H9R9 158 aa19.91■□□□□ 0.78
LSM1-204ENST00000522515 CD209Q9NNX6 404 aa19.91■□□□□ 0.78
LSM1-204ENST00000522515 STAP2Q9UGK3 403 aa19.91■□□□□ 0.78
LSM1-204ENST00000522515 IQSEC3Q9UPP2 1182 aaPredicted RBP19.91■□□□□ 0.78
LSM1-204ENST00000522515 GRIN3BO60391 1043 aa19.9■□□□□ 0.78
LSM1-204ENST00000522515 ARID4AP29374 1257 aaPredicted RBP19.9■□□□□ 0.78
LSM1-204ENST00000522515 GPATCH3Q96I76 525 aa19.9■□□□□ 0.78
LSM1-204ENST00000522515 COA1Q9GZY4 146 aa19.9■□□□□ 0.78
LSM1-204ENST00000522515 TTC41PQ6P2S7 1318 aa19.9■□□□□ 0.78
LSM1-204ENST00000522515 G3V3G9 751 aa19.89■□□□□ 0.77
LSM1-204ENST00000522515 IL1R1P14778 569 aa19.89■□□□□ 0.77
LSM1-204ENST00000522515 RGS3P49796 1198 aa19.89■□□□□ 0.77
LSM1-204ENST00000522515 SCARF1Q14162 830 aa19.89■□□□□ 0.77
LSM1-204ENST00000522515 DCAF8Q5TAQ9 597 aa19.89■□□□□ 0.77
LSM1-204ENST00000522515 TDRD7Q8NHU6 1098 aaKnown RBP19.89■□□□□ 0.77
LSM1-204ENST00000522515 PI4K2BQ8TCG2 481 aa19.89■□□□□ 0.77
LSM1-204ENST00000522515 ZNF512BQ96KM6 892 aaPredicted RBP19.89■□□□□ 0.77
LSM1-204ENST00000522515 CCDC88AQ3V6T2 1871 aa19.88■□□□□ 0.77
LSM1-204ENST00000522515 ECE2O60344 883 aa19.88■□□□□ 0.77
LSM1-204ENST00000522515 UQCRFS1P1P0C7P4 283 aa19.88■□□□□ 0.77
LSM1-204ENST00000522515 ATP5JP18859 108 aa19.88■□□□□ 0.77
LSM1-204ENST00000522515 OSBPL3Q9H4L5 887 aa19.88■□□□□ 0.77
LSM1-204ENST00000522515 GNL3LQ9NVN8 582 aaKnown RBP19.88■□□□□ 0.77
LSM1-204ENST00000522515 LMNB1P20700 586 aa19.87■□□□□ 0.77
LSM1-204ENST00000522515 MCAMP43121 646 aa19.87■□□□□ 0.77
LSM1-204ENST00000522515 RASGRF1Q13972 1273 aa19.87■□□□□ 0.77
LSM1-204ENST00000522515 SBF1O95248 1867 aa19.87■□□□□ 0.77
LSM1-204ENST00000522515 PI16Q6UXB8 463 aa19.87■□□□□ 0.77
LSM1-204ENST00000522515 PODNQ7Z5L7 613 aa19.87■□□□□ 0.77
LSM1-204ENST00000522515 BOLA2Q9H3K6 86 aa19.87■□□□□ 0.77
LSM1-204ENST00000522515 KCNQ5Q9NR82 932 aa19.87■□□□□ 0.77
LSM1-204ENST00000522515 HMG20BQ9P0W2 317 aa19.87■□□□□ 0.77
LSM1-204ENST00000522515 CHD4Q14839 1912 aa19.87■□□□□ 0.77
LSM1-204ENST00000522515 COL1A1P02452 1464 aaPredicted RBP19.86■□□□□ 0.77
LSM1-204ENST00000522515 YDJCA8MPS7 323 aa19.86■□□□□ 0.77
LSM1-204ENST00000522515 ERC2O15083 957 aa19.86■□□□□ 0.77
LSM1-204ENST00000522515 FRAT2O75474 233 aaPredicted RBP19.86■□□□□ 0.77
LSM1-204ENST00000522515 NIM1KQ8IY84 436 aa19.86■□□□□ 0.77
LSM1-204ENST00000522515 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms