RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 PI16Q6UXB8 463 aa15.15■□□□□ 0.02
PABPC1-219ENST00000522387 XDHP47989 1333 aa15.15■□□□□ 0.02
PABPC1-219ENST00000522387 KIF13BQ9NQT8 1826 aa15.15■□□□□ 0.02
PABPC1-219ENST00000522387 VPS37DQ86XT2 251 aa15.15■□□□□ 0.02
PABPC1-219ENST00000522387 LPIN2Q92539 896 aa15.15■□□□□ 0.02
PABPC1-219ENST00000522387 BOLA2Q9H3K6 86 aa15.15■□□□□ 0.02
PABPC1-219ENST00000522387 SNRKQ9NRH2 765 aa15.15■□□□□ 0.02
PABPC1-219ENST00000522387 GGA1Q9UJY5 639 aa15.15■□□□□ 0.02
PABPC1-219ENST00000522387 LRP5O75197 1615 aa15.14■□□□□ 0.01
PABPC1-219ENST00000522387 PHKA1P46020 1223 aa15.14■□□□□ 0.01
PABPC1-219ENST00000522387 PDE1AP54750 535 aa15.14■□□□□ 0.01
PABPC1-219ENST00000522387 TBC1D16Q8TBP0 767 aa15.14■□□□□ 0.01
PABPC1-219ENST00000522387 C7orf43Q8WVR3 580 aa15.14■□□□□ 0.01
PABPC1-219ENST00000522387 ANKRD2Q9GZV1 360 aa15.14■□□□□ 0.01
PABPC1-219ENST00000522387 ZNF609O15014 1411 aa15.14■□□□□ 0.01
PABPC1-219ENST00000522387 SLC5A1P13866 664 aa15.14■□□□□ 0.01
PABPC1-219ENST00000522387 FGFR2P21802 821 aa15.14■□□□□ 0.01
PABPC1-219ENST00000522387 EDC3Q96F86 508 aaKnown RBP15.14■□□□□ 0.01
PABPC1-219ENST00000522387 IFIT1P09914 478 aaKnown RBP15.13■□□□□ 0.01
PABPC1-219ENST00000522387 DNAJC2Q99543 621 aaKnown RBP15.13■□□□□ 0.01
PABPC1-219ENST00000522387 BACH2Q9BYV9 841 aa15.13■□□□□ 0.01
PABPC1-219ENST00000522387 FRAT2O75474 233 aaPredicted RBP15.12■□□□□ 0.01
PABPC1-219ENST00000522387 DOK7Q18PE1 504 aa15.12■□□□□ 0.01
PABPC1-219ENST00000522387 CCDC102BQ68D86 513 aa15.12■□□□□ 0.01
PABPC1-219ENST00000522387 KIAA1551Q9HCM1 1747 aa15.12■□□□□ 0.01
PABPC1-219ENST00000522387 FKBP4Q02790 459 aaKnown RBP eCLIP15.12■□□□□ 0.01
PABPC1-219ENST00000522387 SCARF1Q14162 830 aa15.12■□□□□ 0.01
PABPC1-219ENST00000522387 TTC39AQ5SRH9 613 aa15.12■□□□□ 0.01
PABPC1-219ENST00000522387 ZNF277Q9NRM2 450 aaPredicted RBP15.12■□□□□ 0.01
PABPC1-219ENST00000522387 UBE4AQ14139 1066 aa15.11■□□□□ 0.01
PABPC1-219ENST00000522387 WASHC4Q2M389 1173 aa15.11■□□□□ 0.01
PABPC1-219ENST00000522387 FAM84BQ96KN1 310 aaPredicted RBP15.11■□□□□ 0.01
PABPC1-219ENST00000522387 TRIM6-TRIM34B2RNG4 842 aa15.11■□□□□ 0.01
PABPC1-219ENST00000522387 AOC3Q16853 763 aa15.11■□□□□ 0.01
PABPC1-219ENST00000522387 CCDC158Q5M9N0 1113 aa15.11■□□□□ 0.01
PABPC1-219ENST00000522387 RILPL2Q969X0 211 aa15.11■□□□□ 0.01
PABPC1-219ENST00000522387 DBNDD1Q9H9R9 158 aa15.11■□□□□ 0.01
PABPC1-219ENST00000522387 ECHDC1Q9NTX5 307 aa15.11■□□□□ 0.01
PABPC1-219ENST00000522387 CAVIN4Q5BKX8 364 aa15.1■□□□□ 0.01
PABPC1-219ENST00000522387 SALL3Q9BXA9 1300 aa15.1■□□□□ 0.01
PABPC1-219ENST00000522387 ZC3H12CQ9C0D7 883 aaKnown RBP15.1■□□□□ 0.01
PABPC1-219ENST00000522387 GPR108Q9NPR9 543 aa15.1■□□□□ 0.01
PABPC1-219ENST00000522387 DLEC1Q9Y238 1755 aa15.1■□□□□ 0.01
PABPC1-219ENST00000522387 GSPT1P15170 499 aaKnown RBP15.1■□□□□ 0.01
PABPC1-219ENST00000522387 RASSF7Q02833 373 aa15.1■□□□□ 0.01
PABPC1-219ENST00000522387 CCDC93Q567U6 631 aa15.1■□□□□ 0.01
PABPC1-219ENST00000522387 TMC4Q7Z404 712 aa15.1■□□□□ 0.01
PABPC1-219ENST00000522387 PI4K2BQ8TCG2 481 aa15.1■□□□□ 0.01
PABPC1-219ENST00000522387 LEMD3Q9Y2U8 911 aa15.1■□□□□ 0.01
PABPC1-219ENST00000522387 G3V3G9 751 aa15.09■□□□□ 0.01
PABPC1-219ENST00000522387 YBX3P16989 372 aaKnown RBP eCLIP15.09■□□□□ 0.013e-36■□□□□ 10.8
PABPC1-219ENST00000522387 ATP2B4P23634 1241 aa15.09■□□□□ 0.01
PABPC1-219ENST00000522387 HIBADHP31937 336 aaKnown RBP15.09■□□□□ 0.01
PABPC1-219ENST00000522387 DCAF8Q5TAQ9 597 aa15.09■□□□□ 0.01
PABPC1-219ENST00000522387 ARHGAP27Q6ZUM4 889 aa15.09■□□□□ 0.01
PABPC1-219ENST00000522387 FBXW7Q969H0 707 aa15.09■□□□□ 0.01
PABPC1-219ENST00000522387 KCNQ5Q9NR82 932 aa15.09■□□□□ 0.01
PABPC1-219ENST00000522387 PODXL2Q9NZ53 605 aa15.09■□□□□ 0.01
PABPC1-219ENST00000522387 A0A1B0GUL6 1792 aa15.09■□□□□ 0.01
PABPC1-219ENST00000522387 MCAMP43121 646 aa15.09■□□□□ 0.01
PABPC1-219ENST00000522387 CHAF1AQ13111 956 aaPredicted RBP15.09■□□□□ 0.01
PABPC1-219ENST00000522387 TBC1D9Q6ZT07 1266 aa15.09■□□□□ 0.01
PABPC1-219ENST00000522387 GPATCH3Q96I76 525 aa15.09■□□□□ 0.01
PABPC1-219ENST00000522387 ANTXR1Q9H6X2 564 aa15.09■□□□□ 0.01
PABPC1-219ENST00000522387 BRCA1P38398 1863 aaKnown RBP15.08■□□□□ 0.01
PABPC1-219ENST00000522387 CHGBP05060 677 aa15.08■□□□□ 0
PABPC1-219ENST00000522387 PPIP5K2O43314 1243 aa15.08■□□□□ 0
PABPC1-219ENST00000522387 RASGRF1Q13972 1273 aa15.08■□□□□ 0
PABPC1-219ENST00000522387 DUOX1Q9NRD9 1551 aa15.07■□□□□ 0
PABPC1-219ENST00000522387 GOLIM4O00461 696 aa15.07■□□□□ 0
PABPC1-219ENST00000522387 ZAP70P43403 619 aa15.07■□□□□ 0
PABPC1-219ENST00000522387 GPR162Q16538 588 aa15.07■□□□□ 0
PABPC1-219ENST00000522387 RTKN2Q8IZC4 609 aa15.07■□□□□ 0
PABPC1-219ENST00000522387 LRRC37AA6NMS7 1700 aa15.07■□□□□ 0
PABPC1-219ENST00000522387 NFKBIEO00221 500 aa15.06■□□□□ 0
PABPC1-219ENST00000522387 SLFNL1Q499Z3 407 aa15.06■□□□□ 0
PABPC1-219ENST00000522387 TTC22Q5TAA0 569 aa15.06■□□□□ 0
PABPC1-219ENST00000522387 ERC2O15083 957 aa15.06■□□□□ 0
PABPC1-219ENST00000522387 GLRX3O76003 335 aaKnown RBP15.06■□□□□ 0
PABPC1-219ENST00000522387 TAOK3Q9H2K8 898 aa15.06■□□□□ 0
PABPC1-219ENST00000522387 ABCF2Q9UG63 623 aa15.06■□□□□ 0
PABPC1-219ENST00000522387 STAP2Q9UGK3 403 aa15.06■□□□□ 0
PABPC1-219ENST00000522387 TTC41PQ6P2S7 1318 aa15.06■□□□□ 0
PABPC1-219ENST00000522387 LARGE2Q8N3Y3 721 aa15.05■□□□□ 0
PABPC1-219ENST00000522387 MXD3Q9BW11 206 aa15.05■□□□□ 0
PABPC1-219ENST00000522387 CD209Q9NNX6 404 aa15.05■□□□□ 0
PABPC1-219ENST00000522387 HMG20BQ9P0W2 317 aa15.05■□□□□ 0
PABPC1-219ENST00000522387 IRS2Q9Y4H2 1338 aa15.05■□□□□ -0
PABPC1-219ENST00000522387 ATP5JP18859 108 aa15.05■□□□□ -0
PABPC1-219ENST00000522387 SDSP20132 328 aa15.05■□□□□ -0
PABPC1-219ENST00000522387 ZNF804AQ7Z570 1209 aa15.05■□□□□ -0
PABPC1-219ENST00000522387 FBXO33Q7Z6M2 555 aa15.05■□□□□ -0
PABPC1-219ENST00000522387 PRELPP51888 382 aa15.04■□□□□ -0
PABPC1-219ENST00000522387 SPATA5Q8NB90 893 aa15.04■□□□□ -0
PABPC1-219ENST00000522387 CYP2E1P05181 493 aaPredicted RBP15.04■□□□□ -0
PABPC1-219ENST00000522387 GTF2IP78347 998 aa15.04■□□□□ -0
PABPC1-219ENST00000522387 C8orf34Q49A92 452 aa15.04■□□□□ -0
PABPC1-219ENST00000522387 CC2D2BQ6DHV5 1058 aa15.04■□□□□ -0
PABPC1-219ENST00000522387 EYA3Q99504 573 aa15.04■□□□□ -0
PABPC1-219ENST00000522387 OSBPL3Q9H4L5 887 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms