RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 KRT26Q7Z3Y9 468 aa26.25■■□□□ 1.79
SDCBP-209ENST00000522243 AIDAQ96BJ3 306 aa26.25■■□□□ 1.79
SDCBP-209ENST00000522243 MXD3Q9BW11 206 aa26.25■■□□□ 1.79
SDCBP-209ENST00000522243 SRCIN1Q9C0H9 1055 aa26.25■■□□□ 1.79
SDCBP-209ENST00000522243 ADM5C9JUS6 153 aa26.24■■□□□ 1.79
SDCBP-209ENST00000522243 E9PSI1 815 aa26.24■■□□□ 1.79
SDCBP-209ENST00000522243 ALDH1L1O75891 902 aa26.24■■□□□ 1.79
SDCBP-209ENST00000522243 ECE1P42892 770 aa26.24■■□□□ 1.79
SDCBP-209ENST00000522243 SAPCD2Q86UD0 394 aa26.24■■□□□ 1.79
SDCBP-209ENST00000522243 TNS4Q8IZW8 715 aa26.24■■□□□ 1.79
SDCBP-209ENST00000522243 MRPL50Q8N5N7 158 aaKnown RBP26.24■■□□□ 1.79
SDCBP-209ENST00000522243 HELBQ8NG08 1087 aaPredicted RBP26.24■■□□□ 1.79
SDCBP-209ENST00000522243 WBP1LQ9NX94 342 aa26.24■■□□□ 1.79
SDCBP-209ENST00000522243 SNAP23O00161 211 aa26.23■■□□□ 1.79
SDCBP-209ENST00000522243 TAF5LO75529 589 aa26.23■■□□□ 1.79
SDCBP-209ENST00000522243 KCNJ4P48050 445 aa26.23■■□□□ 1.79
SDCBP-209ENST00000522243 ZNF280AP59817 542 aaPredicted RBP26.23■■□□□ 1.79
SDCBP-209ENST00000522243 SLFN5Q08AF3 891 aa26.23■■□□□ 1.79
SDCBP-209ENST00000522243 CDCA7LQ96GN5 454 aa26.23■■□□□ 1.79
SDCBP-209ENST00000522243 ZNF594Q96JF6 807 aaPredicted RBP26.23■■□□□ 1.79
SDCBP-209ENST00000522243 GMLQ99445 158 aa26.23■■□□□ 1.79
SDCBP-209ENST00000522243 COA1Q9GZY4 146 aa26.23■■□□□ 1.79
SDCBP-209ENST00000522243 GGA3Q9NZ52 723 aa26.23■■□□□ 1.79
SDCBP-209ENST00000522243 ZNF646O15015 1829 aaPredicted RBP26.23■■□□□ 1.79
SDCBP-209ENST00000522243 USP17L8P0C7I0 530 aa26.22■■□□□ 1.79
SDCBP-209ENST00000522243 A0A1B0GUL6 1792 aa26.22■■□□□ 1.79
SDCBP-209ENST00000522243 ZNF609O15014 1411 aa26.22■■□□□ 1.79
SDCBP-209ENST00000522243 AOC2O75106 756 aa26.2■■□□□ 1.78
SDCBP-209ENST00000522243 SCARF1Q14162 830 aa26.2■■□□□ 1.78
SDCBP-209ENST00000522243 DACT2Q5SW24 774 aa26.2■■□□□ 1.78
SDCBP-209ENST00000522243 SUCLG2Q96I99 432 aa26.2■■□□□ 1.78
SDCBP-209ENST00000522243 MYOZ2Q9NPC6 264 aa26.2■■□□□ 1.78
SDCBP-209ENST00000522243 PCNTO95613 3336 aa26.19■■□□□ 1.78
SDCBP-209ENST00000522243 THSD7BQ9C0I4 1608 aa26.19■■□□□ 1.78
SDCBP-209ENST00000522243 CTCFP49711 727 aaPredicted RBP26.19■■□□□ 1.78
SDCBP-209ENST00000522243 MAP2K1Q02750 393 aaPredicted RBP26.19■■□□□ 1.78
SDCBP-209ENST00000522243 CCDC57Q2TAC2 916 aa26.19■■□□□ 1.78
SDCBP-209ENST00000522243 TAF7LQ5H9L4 462 aa26.19■■□□□ 1.78
SDCBP-209ENST00000522243 ANGEL2Q5VTE6 544 aaKnown RBP26.19■■□□□ 1.78
SDCBP-209ENST00000522243 SSH1Q8WYL5 1049 aa26.19■■□□□ 1.78
SDCBP-209ENST00000522243 NBPF7P0C2Y1 421 aaPredicted RBP26.18■■□□□ 1.78
SDCBP-209ENST00000522243 SULF1Q8IWU6 871 aa26.18■■□□□ 1.78
SDCBP-209ENST00000522243 PLIN1O60240 522 aa26.17■■□□□ 1.78
SDCBP-209ENST00000522243 LBX1P52954 281 aa26.17■■□□□ 1.78
SDCBP-209ENST00000522243 STRIP1Q5VSL9 837 aa26.17■■□□□ 1.78
SDCBP-209ENST00000522243 TTLL5Q6EMB2 1281 aa26.17■■□□□ 1.78
SDCBP-209ENST00000522243 HUNKP57058 714 aa26.16■■□□□ 1.78
SDCBP-209ENST00000522243 LDHAL6AQ6ZMR3 332 aa26.16■■□□□ 1.78
SDCBP-209ENST00000522243 KAZALD1Q96I82 304 aa26.16■■□□□ 1.78
SDCBP-209ENST00000522243 HHIPL1Q96JK4 782 aa26.16■■□□□ 1.78
SDCBP-209ENST00000522243 CD209Q9NNX6 404 aa26.16■■□□□ 1.78
SDCBP-209ENST00000522243 CNNM1Q9NRU3 951 aa26.16■■□□□ 1.78
SDCBP-209ENST00000522243 SCAF8Q9UPN6 1271 aaKnown RBP26.16■■□□□ 1.78
SDCBP-209ENST00000522243 CAPN15O75808 1086 aa26.15■■□□□ 1.78
SDCBP-209ENST00000522243 GTF2IP78347 998 aa26.15■■□□□ 1.78
SDCBP-209ENST00000522243 GBA2Q9HCG7 927 aaPredicted RBP26.15■■□□□ 1.78
SDCBP-209ENST00000522243 PTPRCP08575 1304 aa26.14■■□□□ 1.78
SDCBP-209ENST00000522243 IRS2Q9Y4H2 1338 aa26.14■■□□□ 1.78
SDCBP-209ENST00000522243 CCER2I3L3R5 266 aa26.14■■□□□ 1.78
SDCBP-209ENST00000522243 PRDM10Q9NQV6 1147 aa26.14■■□□□ 1.78
SDCBP-209ENST00000522243 MYO3BQ8WXR4 1341 aa26.14■■□□□ 1.77
SDCBP-209ENST00000522243 HSPA8P11142 646 aaKnown RBP26.13■■□□□ 1.77
SDCBP-209ENST00000522243 NBPF9Q3BBW0 867 aa26.13■■□□□ 1.77
SDCBP-209ENST00000522243 OGFOD1Q8N543 542 aa26.13■■□□□ 1.77
SDCBP-209ENST00000522243 C2orf69Q8N8R5 385 aa26.13■■□□□ 1.77
SDCBP-209ENST00000522243 CDCA5Q96FF9 252 aa26.13■■□□□ 1.77
SDCBP-209ENST00000522243 UTYO14607 1347 aa26.13■■□□□ 1.77
SDCBP-209ENST00000522243 MAP2K2P36507 400 aa26.12■■□□□ 1.77
SDCBP-209ENST00000522243 KIAA0825Q8IV33 1275 aa26.12■■□□□ 1.77
SDCBP-209ENST00000522243 BEGAINQ9BUH8 593 aa26.12■■□□□ 1.77
SDCBP-209ENST00000522243 PUS3Q9BZE2 481 aaKnown RBP26.12■■□□□ 1.77
SDCBP-209ENST00000522243 C15orf52Q6ZUT6 534 aaKnown RBP26.11■■□□□ 1.77
SDCBP-209ENST00000522243 BICC1Q9H694 974 aaKnown RBP26.11■■□□□ 1.77
SDCBP-209ENST00000522243 TRMT2AQ8IZ69 625 aaKnown RBP26.1■■□□□ 1.77
SDCBP-209ENST00000522243 ZIC5Q96T25 663 aa26.1■■□□□ 1.77
SDCBP-209ENST00000522243 SMC4Q9NTJ3 1288 aa26.1■■□□□ 1.77
SDCBP-209ENST00000522243 WNT10BO00744 389 aa26.09■■□□□ 1.77
SDCBP-209ENST00000522243 SASH1O94885 1247 aa26.09■■□□□ 1.77
SDCBP-209ENST00000522243 ALDH1L2Q3SY69 923 aa26.09■■□□□ 1.77
SDCBP-209ENST00000522243 RGMBQ6NW40 437 aa26.09■■□□□ 1.77
SDCBP-209ENST00000522243 ZNF804AQ7Z570 1209 aa26.09■■□□□ 1.77
SDCBP-209ENST00000522243 TSKSQ9UJT2 592 aa26.09■■□□□ 1.77
SDCBP-209ENST00000522243 PITPNM2Q9BZ72 1349 aa26.09■■□□□ 1.77
SDCBP-209ENST00000522243 PRAMEF18Q5VWM3 479 aa26.08■■□□□ 1.77
SDCBP-209ENST00000522243 HDAC9Q9UKV0 1011 aa26.08■■□□□ 1.77
SDCBP-209ENST00000522243 JAG2Q9Y219 1238 aa26.08■■□□□ 1.77
SDCBP-209ENST00000522243 CERS5Q8N5B7 392 aa26.07■■□□□ 1.76
SDCBP-209ENST00000522243 ANKRD44Q8N8A2 993 aa26.07■■□□□ 1.76
SDCBP-209ENST00000522243 IL1R1P14778 569 aa26.06■■□□□ 1.76
SDCBP-209ENST00000522243 RABL6Q3YEC7 729 aaPredicted RBP26.06■■□□□ 1.76
SDCBP-209ENST00000522243 USP44Q9H0E7 712 aa26.06■■□□□ 1.76
SDCBP-209ENST00000522243 F8W031 263 aaPredicted RBP26.05■■□□□ 1.76
SDCBP-209ENST00000522243 ZNF157P51786 506 aaPredicted RBP26.05■■□□□ 1.76
SDCBP-209ENST00000522243 NOGQ13253 232 aa26.05■■□□□ 1.76
SDCBP-209ENST00000522243 FAM155AB1AL88 458 aaPredicted RBP26.04■■□□□ 1.76
SDCBP-209ENST00000522243 LRRC24Q50LG9 513 aa26.04■■□□□ 1.76
SDCBP-209ENST00000522243 RIPOR2Q9Y4F9 1068 aa26.04■■□□□ 1.76
SDCBP-209ENST00000522243 GYG1P46976 350 aa26.03■■□□□ 1.76
SDCBP-209ENST00000522243 BRPF1P55201 1214 aaPredicted RBP26.03■■□□□ 1.76
SDCBP-209ENST00000522243 UBE4AQ14139 1066 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms