RNA–Protein interactions for RNA: ENST00000522163.5

RUNX1T1-240, Transcript of RUNX1 translocation partner 1, human

TSL 5

Gene RUNX1T1, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1T1-240	ENST00000522163	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.96	□□□□□ -0.49
RUNX1T1-240	ENST00000522163	EFCC1	Q9HA90	598 aa		11.96	□□□□□ -0.49
RUNX1T1-240	ENST00000522163	XDH	P47989	1333 aa		11.95	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	WTIP	A6NIX2	430 aa	Predicted RBP	11.95	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	TMPO	P42166	694 aa	Known RBP	11.95	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	KRT24	Q2M2I5	525 aa		11.95	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	CCDC152	Q4G0S7	254 aa		11.95	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	MKI67	P46013	3256 aa	Known RBP	11.94	□□□□□ -0.5
RUNX1T1-240	ENST00000522163		H0YGN5	161 aa		11.94	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	HSP90B1	P14625	803 aa	Known RBP	11.94	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	SP3	Q02447	781 aa		11.94	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	LMOD3	Q0VAK6	560 aa		11.94	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	CRHR2	Q13324	411 aa		11.94	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	SLC4A8	Q2Y0W8	1093 aa		11.94	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	DACT2	Q5SW24	774 aa		11.94	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	HDGFL1	Q5TGJ6	251 aa		11.94	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	OTUD7B	Q6GQQ9	843 aa		11.94	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.94	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	ANKRD18A	Q8IVF6	992 aa		11.94	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	CCDC146	Q8IYE0	955 aa		11.94	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.94	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	SLC17A8	Q8NDX2	589 aa		11.94	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	WNK4	Q96J92	1243 aa		11.94	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	LAS1L	Q9Y4W2	734 aa	Known RBP	11.94	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	MYC	P01106	439 aa	Predicted RBP	11.93	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	ZBTB48	P10074	688 aa	Predicted RBP	11.93	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	TRIM28	Q13263	835 aa	Known RBP	11.93	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	WDR43	Q15061	677 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	RIC3	Q7Z5B4	369 aa		11.93	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	NBPF11	Q86T75	865 aa		11.93	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	JARID2	Q92833	1246 aa	Predicted RBP	11.93	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	OTUD5	Q96G74	571 aa		11.93	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	CLMN	Q96JQ2	1002 aa		11.93	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	DBF4	Q9UBU7	674 aa	Predicted RBP	11.93	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	MYO3B	Q8WXR4	1341 aa		11.92	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	PDE8A	O60658	829 aa		11.92	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	NEUROD2	Q15784	382 aa		11.92	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	STRIP1	Q5VSL9	837 aa		11.92	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	CHRDL2	Q6WN34	429 aa		11.92	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	KIAA0825	Q8IV33	1275 aa		11.92	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	ZNF333	Q96JL9	665 aa		11.92	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	DEFB129	Q9H1M3	183 aa		11.92	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	PPP1R12B	O60237	982 aa	Predicted RBP	11.91	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	MMP14	P50281	582 aa		11.91	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	CAP1	Q01518	475 aa		11.91	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	MAP3K11	Q16584	847 aa		11.91	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	SLC9C1	Q4G0N8	1177 aa		11.91	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	TTLL5	Q6EMB2	1281 aa		11.91	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	RUNDC1	Q96C34	613 aa		11.91	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	MYD88	Q99836	296 aa		11.91	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	HYPK	Q9NX55	129 aa		11.91	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	CHL1	O00533	1208 aa		11.9	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	ARHGEF6	Q15052	776 aa		11.9	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	DPF3	Q92784	378 aa		11.9	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	PTPN18	Q99952	460 aa		11.9	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	COA1	Q9GZY4	146 aa		11.9	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.9	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	MINPP1	Q9UNW1	487 aa		11.9	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	ADAMTS8	Q9UP79	889 aa		11.9	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	PTCH2	Q9Y6C5	1203 aa		11.9	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	MED23	Q9ULK4	1368 aa		11.9	□□□□□ -0.5
RUNX1T1-240	ENST00000522163	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.9	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	PCCA	P05165	728 aa	Predicted RBP	11.89	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	CCT4	P50991	539 aa	Known RBP	11.89	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	GOLGA2	Q08379	1002 aa		11.89	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	DLGAP5	Q15398	846 aa		11.89	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	SUPT20HL1	Q3ZLR7	823 aa		11.89	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	CDC5L	Q99459	802 aa	Known RBP	11.89	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	RBM27	Q9P2N5	1060 aa	Known RBP	11.89	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	UNCX	A6NJT0	531 aa		11.88	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	GJA5	P36382	358 aa		11.88	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	IREB2	P48200	963 aa	Known RBP	11.88	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	GTF2I	P78347	998 aa		11.88	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	TXNRD3	Q86VQ6	643 aa		11.88	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	CCDC191	Q8NCU4	936 aa		11.88	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	ZBED3	Q96IU2	234 aa	Predicted RBP	11.88	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	BSDC1	Q9NW68	430 aa	Predicted RBP	11.88	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	CWC25	Q9NXE8	425 aa	Predicted RBP	11.88	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	TRIM35	Q9UPQ4	493 aa		11.88	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	PSME4	Q14997	1843 aa		11.88	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	CENPF	P49454	3210 aa		11.88	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	BRCA2	P51587	3418 aa		11.88	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	HTT	P42858	3142 aa		11.87	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	TESPA1	A2RU30	521 aa	Predicted RBP	11.87	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	USP2	O75604	605 aa	Predicted RBP	11.87	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	HOXB7	P09629	217 aa		11.87	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.87	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	SH3TC2	Q8TF17	1288 aa		11.87	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	PHAX	Q9H814	394 aa	Known RBP	11.87	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	PPP2R3B	Q9Y5P8	575 aa		11.87	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	CLRN2	A0PK11	232 aa		11.86	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	DUSP27	Q5VZP5	1158 aa		11.86	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	ANKRD13A	Q8IZ07	590 aa		11.86	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	OPTN	Q96CV9	577 aa		11.86	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	ELP3	Q9H9T3	547 aa		11.86	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	VEZT	Q9HBM0	779 aa		11.86	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	ZFYVE28	Q9HCC9	887 aa		11.86	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	LEMD3	Q9Y2U8	911 aa		11.86	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	PCDHAC2	Q9Y5I4	1007 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms