RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 CEP44Q9C0F1 390 aa7.54□□□□□ -1.2
CTNNA1-233ENST00000522052 HCN2Q9UL51 889 aa7.54□□□□□ -1.2
CTNNA1-233ENST00000522052 FBXO24O75426 580 aa7.53□□□□□ -1.2
CTNNA1-233ENST00000522052 PTSQ03393 145 aa7.53□□□□□ -1.2
CTNNA1-233ENST00000522052 DBN1Q16643 649 aa7.53□□□□□ -1.2
CTNNA1-233ENST00000522052 DHX32Q7L7V1 743 aaKnown RBP7.53□□□□□ -1.2
CTNNA1-233ENST00000522052 TRIM22Q8IYM9 498 aa7.53□□□□□ -1.2
CTNNA1-233ENST00000522052 BHMTQ93088 406 aa7.53□□□□□ -1.2
CTNNA1-233ENST00000522052 SLC30A3Q99726 388 aa7.53□□□□□ -1.2
CTNNA1-233ENST00000522052 KCNQ5Q9NR82 932 aa7.53□□□□□ -1.2
CTNNA1-233ENST00000522052 DZANK1Q9NVP4 752 aa7.53□□□□□ -1.2
CTNNA1-233ENST00000522052 ITPKAP23677 461 aa7.52□□□□□ -1.21
CTNNA1-233ENST00000522052 GRIA4P48058 902 aa7.52□□□□□ -1.21
CTNNA1-233ENST00000522052 LIG3P49916 1009 aa7.52□□□□□ -1.21
CTNNA1-233ENST00000522052 NRLP54845 237 aa7.52□□□□□ -1.21
CTNNA1-233ENST00000522052 TPTE2Q6XPS3 522 aa7.52□□□□□ -1.21
CTNNA1-233ENST00000522052 PHC3Q8NDX5 983 aa7.52□□□□□ -1.21
CTNNA1-233ENST00000522052 ZNF296Q8WUU4 475 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-233ENST00000522052 GMCL1Q96IK5 515 aa7.52□□□□□ -1.21
CTNNA1-233ENST00000522052 EAF1Q96JC9 268 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-233ENST00000522052 RHOVQ96L33 236 aa7.52□□□□□ -1.21
CTNNA1-233ENST00000522052 BHLHE41Q9C0J9 482 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-233ENST00000522052 ATP13A2Q9NQ11 1180 aa7.52□□□□□ -1.21
CTNNA1-233ENST00000522052 SOBPA7XYQ1 873 aa7.51□□□□□ -1.21
CTNNA1-233ENST00000522052 NFKBIEO00221 500 aa7.51□□□□□ -1.21
CTNNA1-233ENST00000522052 CD33P20138 364 aa7.51□□□□□ -1.21
CTNNA1-233ENST00000522052 MAP3K11Q16584 847 aa7.51□□□□□ -1.21
CTNNA1-233ENST00000522052 TMEM102Q8N9M5 508 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-233ENST00000522052 ABHD17AQ96GS6 310 aa7.51□□□□□ -1.21
CTNNA1-233ENST00000522052 SPACA7Q96KW9 195 aa7.51□□□□□ -1.21
CTNNA1-233ENST00000522052 NSUN5Q96P11 429 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-233ENST00000522052 NT5C1AQ9BXI3 368 aa7.51□□□□□ -1.21
CTNNA1-233ENST00000522052 OSBPL2Q9H1P3 480 aa7.51□□□□□ -1.21
CTNNA1-233ENST00000522052 ATXN7L1Q9ULK2 861 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-233ENST00000522052 TMA7Q9Y2S6 64 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-233ENST00000522052 TRPA1O75762 1119 aa7.5□□□□□ -1.21
CTNNA1-233ENST00000522052 SSBP05455 408 aaKnown RBP eCLIP7.5□□□□□ -1.21
CTNNA1-233ENST00000522052 CELA3AP09093 270 aa7.5□□□□□ -1.21
CTNNA1-233ENST00000522052 NASPP49321 788 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-233ENST00000522052 NEUROD1Q13562 356 aa7.5□□□□□ -1.21
CTNNA1-233ENST00000522052 RPS26P11Q5JNZ5 115 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-233ENST00000522052 FAM182BQ5T319 152 aa7.5□□□□□ -1.21
CTNNA1-233ENST00000522052 FBXL19Q6PCT2 694 aa7.5□□□□□ -1.21
CTNNA1-233ENST00000522052 RAB44Q7Z6P3 723 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-233ENST00000522052 CKAP2LQ8IYA6 745 aa7.5□□□□□ -1.21
CTNNA1-233ENST00000522052 CCDC155Q8N6L0 562 aa7.5□□□□□ -1.21
CTNNA1-233ENST00000522052 TRPM4Q8TD43 1214 aa7.5□□□□□ -1.21
CTNNA1-233ENST00000522052 NXPE3Q969Y0 559 aa7.5□□□□□ -1.21
CTNNA1-233ENST00000522052 HHIPQ96QV1 700 aa7.5□□□□□ -1.21
CTNNA1-233ENST00000522052 PIF1Q9H611 641 aa7.5□□□□□ -1.21
CTNNA1-233ENST00000522052 ZSWIM4Q9H7M6 989 aa7.5□□□□□ -1.21
CTNNA1-233ENST00000522052 EFR3BQ9Y2G0 817 aa7.5□□□□□ -1.21
CTNNA1-233ENST00000522052 SUPT16HQ9Y5B9 1047 aaKnown RBP7.5□□□□□ -1.21
CTNNA1-233ENST00000522052 A0A096LPE4 126 aa7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 A0A1W2PPZ6 126 aa7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 TLDC2A0PJX2 215 aa7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 METTL12A8MUP2 240 aa7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 ENC1O14682 589 aa7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 GREM1O60565 184 aa7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 PF4P02776 101 aa7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 GARTP22102 1010 aa7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 SOX9P48436 509 aa7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 GPLD1P80108 840 aa7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 LMNB2Q03252 620 aa7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 NFX1Q12986 1120 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 COL9A2Q14055 689 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 SPRED3Q2MJR0 410 aa7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 NBPF6Q5VWK0 638 aa7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 NBPF4Q96M43 638 aa7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 NECAB3Q96P71 396 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 ZNF576Q9H609 170 aa7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 SEC31BQ9NQW1 1179 aa7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 GINM1Q9NU53 330 aa7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 STRIP2Q9ULQ0 834 aa7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 TLR6Q9Y2C9 796 aa7.49□□□□□ -1.21
CTNNA1-233ENST00000522052 LOC102724428A0A0B4J2F2 783 aa7.48□□□□□ -1.21
CTNNA1-233ENST00000522052 PDE2AO00408 941 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-233ENST00000522052 NRG2O14511 850 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-233ENST00000522052 SIK1P57059 783 aa7.48□□□□□ -1.21
CTNNA1-233ENST00000522052 FAM160A1Q05DH4 1040 aa7.48□□□□□ -1.21
CTNNA1-233ENST00000522052 CAMK2GQ13555 558 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-233ENST00000522052 ZNF837Q96EG3 531 aaPredicted RBP7.48□□□□□ -1.21
CTNNA1-233ENST00000522052 PBX4Q9BYU1 374 aa7.48□□□□□ -1.21
CTNNA1-233ENST00000522052 ZBTB42B2RXF5 422 aa7.47□□□□□ -1.21
CTNNA1-233ENST00000522052 FGFR3P22607 806 aa7.47□□□□□ -1.21
CTNNA1-233ENST00000522052 RPS26P62854 115 aaKnown RBP7.47□□□□□ -1.21
CTNNA1-233ENST00000522052 SNAP47Q5SQN1 464 aa7.47□□□□□ -1.21
CTNNA1-233ENST00000522052 TTBK2Q6IQ55 1244 aa7.47□□□□□ -1.21
CTNNA1-233ENST00000522052 AGMOQ6ZNB7 445 aa7.47□□□□□ -1.21
CTNNA1-233ENST00000522052 GOLM1Q8NBJ4 401 aa7.47□□□□□ -1.21
CTNNA1-233ENST00000522052 ASAP3Q8TDY4 903 aa7.47□□□□□ -1.21
CTNNA1-233ENST00000522052 RASSF4Q9H2L5 321 aa7.47□□□□□ -1.21
CTNNA1-233ENST00000522052 ZNF408Q9H9D4 720 aa7.47□□□□□ -1.21
CTNNA1-233ENST00000522052 AAASQ9NRG9 546 aa7.47□□□□□ -1.21
CTNNA1-233ENST00000522052 PHF24Q9UPV7 400 aa7.47□□□□□ -1.21
CTNNA1-233ENST00000522052 GFRA3O60609 400 aa7.46□□□□□ -1.22
CTNNA1-233ENST00000522052 TFE3P19532 575 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-233ENST00000522052 ITGA6P23229 1130 aa7.46□□□□□ -1.22
CTNNA1-233ENST00000522052 FAAP100Q0VG06 881 aa7.46□□□□□ -1.22
CTNNA1-233ENST00000522052 NFE2L2Q16236 605 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms