RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	LDHD	Q86WU2	507 aa		10.45	□□□□□ -0.74
CTNNA1-231	ENST00000521941	MICALL2	Q8IY33	904 aa		10.45	□□□□□ -0.74
CTNNA1-231	ENST00000521941	TRPM4	Q8TD43	1214 aa		10.45	□□□□□ -0.74
CTNNA1-231	ENST00000521941	C1orf115	Q9H7X2	142 aa		10.45	□□□□□ -0.74
CTNNA1-231	ENST00000521941	RCAN3	Q9UKA8	241 aa		10.45	□□□□□ -0.74
CTNNA1-231	ENST00000521941	PA2G4	Q9UQ80	394 aa	Known RBP	10.45	□□□□□ -0.74
CTNNA1-231	ENST00000521941	MROH5	Q6ZUA9	1318 aa		10.44	□□□□□ -0.74
CTNNA1-231	ENST00000521941		H7C1D1	291 aa		10.44	□□□□□ -0.74
CTNNA1-231	ENST00000521941	HTRA3	P83110	453 aa		10.44	□□□□□ -0.74
CTNNA1-231	ENST00000521941	RBM26	Q5T8P6	1007 aa	Known RBP	10.44	□□□□□ -0.74
CTNNA1-231	ENST00000521941	MAP1S	Q66K74	1059 aa	Predicted RBP	10.44	□□□□□ -0.74
CTNNA1-231	ENST00000521941	PNMA8A	Q86V59	439 aa	Predicted RBP	10.44	□□□□□ -0.74
CTNNA1-231	ENST00000521941	PANK1	Q8TE04	598 aa		10.44	□□□□□ -0.74
CTNNA1-231	ENST00000521941	MXD3	Q9BW11	206 aa		10.44	□□□□□ -0.74
CTNNA1-231	ENST00000521941	COA1	Q9GZY4	146 aa		10.44	□□□□□ -0.74
CTNNA1-231	ENST00000521941	ADARB2	Q9NS39	739 aa	Known RBP	10.44	□□□□□ -0.74
CTNNA1-231	ENST00000521941	CNOT7	Q9UIV1	285 aa	Known RBP	10.44	□□□□□ -0.74
CTNNA1-231	ENST00000521941	HDAC5	Q9UQL6	1122 aa		10.44	□□□□□ -0.74
CTNNA1-231	ENST00000521941	JAG2	Q9Y219	1238 aa		10.44	□□□□□ -0.74
CTNNA1-231	ENST00000521941	MYH13	Q9UKX3	1938 aa		10.43	□□□□□ -0.74
CTNNA1-231	ENST00000521941	USP17L3	A6NCW0	530 aa		10.43	□□□□□ -0.74
CTNNA1-231	ENST00000521941	USP17L4	A6NCW7	530 aa		10.43	□□□□□ -0.74
CTNNA1-231	ENST00000521941	SRGAP3	O43295	1099 aa		10.43	□□□□□ -0.74
CTNNA1-231	ENST00000521941	GNAI2	P04899	355 aa		10.43	□□□□□ -0.74
CTNNA1-231	ENST00000521941	RFX5	P48382	616 aa	Predicted RBP	10.43	□□□□□ -0.74
CTNNA1-231	ENST00000521941	PTPN12	Q05209	780 aa	Known RBP	10.43	□□□□□ -0.74
CTNNA1-231	ENST00000521941	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.43	□□□□□ -0.74
CTNNA1-231	ENST00000521941	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.43	□□□□□ -0.74
CTNNA1-231	ENST00000521941	USP17L1	Q7RTZ2	530 aa		10.43	□□□□□ -0.74
CTNNA1-231	ENST00000521941	SAMD7	Q7Z3H4	446 aa		10.43	□□□□□ -0.74
CTNNA1-231	ENST00000521941	ZNF804A	Q7Z570	1209 aa		10.43	□□□□□ -0.74
CTNNA1-231	ENST00000521941	PODN	Q7Z5L7	613 aa		10.43	□□□□□ -0.74
CTNNA1-231	ENST00000521941	RIPOR2	Q9Y4F9	1068 aa		10.43	□□□□□ -0.74
CTNNA1-231	ENST00000521941	EYA2	O00167	538 aa		10.42	□□□□□ -0.74
CTNNA1-231	ENST00000521941	VIL1	P09327	827 aa	Known RBP	10.42	□□□□□ -0.74
CTNNA1-231	ENST00000521941	GYG1	P46976	350 aa		10.42	□□□□□ -0.74
CTNNA1-231	ENST00000521941	GTF2I	P78347	998 aa		10.42	□□□□□ -0.74
CTNNA1-231	ENST00000521941	USP50	Q70EL3	339 aa	Predicted RBP	10.42	□□□□□ -0.74
CTNNA1-231	ENST00000521941	CD209	Q9NNX6	404 aa		10.42	□□□□□ -0.74
CTNNA1-231	ENST00000521941	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.42	□□□□□ -0.74
CTNNA1-231	ENST00000521941	IRS2	Q9Y4H2	1338 aa		10.41	□□□□□ -0.74
CTNNA1-231	ENST00000521941	PNMA6E	A0A0J9YXQ4	647 aa		10.41	□□□□□ -0.74
CTNNA1-231	ENST00000521941	PDE8B	O95263	885 aa		10.41	□□□□□ -0.74
CTNNA1-231	ENST00000521941	EGFR	P00533	1210 aa		10.41	□□□□□ -0.74
CTNNA1-231	ENST00000521941	RPS12	P25398	132 aa	Known RBP	10.41	□□□□□ -0.74
CTNNA1-231	ENST00000521941	APLP1	P51693	650 aa		10.41	□□□□□ -0.74
CTNNA1-231	ENST00000521941	UBE4A	Q14139	1066 aa		10.41	□□□□□ -0.74
CTNNA1-231	ENST00000521941	KIF4B	Q2VIQ3	1234 aa		10.41	□□□□□ -0.74
CTNNA1-231	ENST00000521941	TTLL5	Q6EMB2	1281 aa		10.41	□□□□□ -0.74
CTNNA1-231	ENST00000521941	VPS37D	Q86XT2	251 aa		10.41	□□□□□ -0.74
CTNNA1-231	ENST00000521941	CNTROB	Q8N137	903 aa		10.41	□□□□□ -0.74
CTNNA1-231	ENST00000521941	COG6	Q9Y2V7	657 aa		10.41	□□□□□ -0.74
CTNNA1-231	ENST00000521941	ARAP2	Q8WZ64	1704 aa		10.41	□□□□□ -0.74
CTNNA1-231	ENST00000521941		F8W031	263 aa	Predicted RBP	10.4	□□□□□ -0.74
CTNNA1-231	ENST00000521941	FRAT2	O75474	233 aa	Predicted RBP	10.4	□□□□□ -0.74
CTNNA1-231	ENST00000521941	IFIT1	P09914	478 aa	Known RBP	10.4	□□□□□ -0.74
CTNNA1-231	ENST00000521941	HIBADH	P31937	336 aa	Known RBP	10.4	□□□□□ -0.74
CTNNA1-231	ENST00000521941	HIRA	P54198	1017 aa	Predicted RBP	10.4	□□□□□ -0.74
CTNNA1-231	ENST00000521941	FMR1	Q06787	632 aa	Known RBP eCLIP	10.4	□□□□□ -0.74	1e-18	■■■■□ 26.5
CTNNA1-231	ENST00000521941	CHAF1A	Q13111	956 aa	Predicted RBP	10.4	□□□□□ -0.74
CTNNA1-231	ENST00000521941	PUM3	Q15397	648 aa	Known RBP	10.4	□□□□□ -0.74
CTNNA1-231	ENST00000521941	DACT2	Q5SW24	774 aa		10.4	□□□□□ -0.74
CTNNA1-231	ENST00000521941	STRIP1	Q5VSL9	837 aa		10.4	□□□□□ -0.74
CTNNA1-231	ENST00000521941	ATG9A	Q7Z3C6	839 aa		10.4	□□□□□ -0.74
CTNNA1-231	ENST00000521941	KIAA0825	Q8IV33	1275 aa		10.4	□□□□□ -0.74
CTNNA1-231	ENST00000521941	VGLL2	Q8N8G2	317 aa		10.4	□□□□□ -0.74
CTNNA1-231	ENST00000521941	AGBL3	Q8NEM8	1001 aa		10.4	□□□□□ -0.74
CTNNA1-231	ENST00000521941	DPF2	Q92785	391 aa		10.4	□□□□□ -0.74
CTNNA1-231	ENST00000521941	TRPM7	Q96QT4	1865 aa		10.39	□□□□□ -0.75
CTNNA1-231	ENST00000521941	TRAF5	O00463	557 aa		10.39	□□□□□ -0.75
CTNNA1-231	ENST00000521941	USP17L8	P0C7I0	530 aa		10.39	□□□□□ -0.75
CTNNA1-231	ENST00000521941	MS4A1	P11836	297 aa		10.39	□□□□□ -0.75
CTNNA1-231	ENST00000521941	SLC5A1	P13866	664 aa		10.39	□□□□□ -0.75
CTNNA1-231	ENST00000521941	MVP	Q14764	893 aa	Known RBP	10.39	□□□□□ -0.75
CTNNA1-231	ENST00000521941	ATP2B3	Q16720	1220 aa		10.39	□□□□□ -0.75
CTNNA1-231	ENST00000521941	CAVIN4	Q5BKX8	364 aa		10.39	□□□□□ -0.75
CTNNA1-231	ENST00000521941	C15orf52	Q6ZUT6	534 aa	Known RBP	10.39	□□□□□ -0.75
CTNNA1-231	ENST00000521941	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	10.39	□□□□□ -0.75
CTNNA1-231	ENST00000521941	GLIS2	Q9BZE0	524 aa	Predicted RBP	10.39	□□□□□ -0.75
CTNNA1-231	ENST00000521941	ZNF408	Q9H9D4	720 aa		10.39	□□□□□ -0.75
CTNNA1-231	ENST00000521941	GGA3	Q9NZ52	723 aa		10.39	□□□□□ -0.75
CTNNA1-231	ENST00000521941	CEP126	Q9P2H0	1117 aa		10.39	□□□□□ -0.75
CTNNA1-231	ENST00000521941	ASTN2	O75129	1339 aa	Predicted RBP	10.38	□□□□□ -0.75
CTNNA1-231	ENST00000521941	MYO3B	Q8WXR4	1341 aa		10.38	□□□□□ -0.75
CTNNA1-231	ENST00000521941	POLR2A	P24928	1970 aa	Known RBP	10.38	□□□□□ -0.75
CTNNA1-231	ENST00000521941	ZBTB7B	O15156	539 aa	Predicted RBP	10.38	□□□□□ -0.75
CTNNA1-231	ENST00000521941	CIAO1	O76071	339 aa		10.38	□□□□□ -0.75
CTNNA1-231	ENST00000521941	SASH1	O94885	1247 aa		10.38	□□□□□ -0.75
CTNNA1-231	ENST00000521941	IL1R1	P14778	569 aa		10.38	□□□□□ -0.75
CTNNA1-231	ENST00000521941	IL15	P40933	162 aa	Predicted RBP	10.38	□□□□□ -0.75
CTNNA1-231	ENST00000521941	BCAM	P50895	628 aa		10.38	□□□□□ -0.75
CTNNA1-231	ENST00000521941	OS9	Q13438	667 aa	Predicted RBP	10.38	□□□□□ -0.75
CTNNA1-231	ENST00000521941	MTX1	Q13505	466 aa		10.38	□□□□□ -0.75
CTNNA1-231	ENST00000521941	C20orf194	Q5TEA3	1177 aa		10.38	□□□□□ -0.75
CTNNA1-231	ENST00000521941	FAM84B	Q96KN1	310 aa	Predicted RBP	10.38	□□□□□ -0.75
CTNNA1-231	ENST00000521941	GML	Q99445	158 aa		10.38	□□□□□ -0.75
CTNNA1-231	ENST00000521941	MYOZ2	Q9NPC6	264 aa		10.38	□□□□□ -0.75
CTNNA1-231	ENST00000521941	COPRS	Q9NQ92	184 aa		10.38	□□□□□ -0.75
CTNNA1-231	ENST00000521941	ZNF609	O15014	1411 aa		10.38	□□□□□ -0.75
CTNNA1-231	ENST00000521941	PASK	Q96RG2	1323 aa		10.37	□□□□□ -0.75

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