RNA–Protein interactions for RNA: ENST00000521540.1

NEFM-205, Transcript of neurofilament medium, humanhuman

TSL 5

Gene NEFM, Length 1,885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-205ENST00000521540 LAMA4Q16363 1823 aa15.74■□□□□ 0.11
NEFM-205ENST00000521540 GOLIM4O00461 696 aa15.74■□□□□ 0.11
NEFM-205ENST00000521540 RNF113AO15541 343 aaKnown RBP15.74■□□□□ 0.11
NEFM-205ENST00000521540 PCCAP05165 728 aaPredicted RBP15.74■□□□□ 0.11
NEFM-205ENST00000521540 TPM2P07951 284 aa15.74■□□□□ 0.11
NEFM-205ENST00000521540 CCDC57Q2TAC2 916 aa15.74■□□□□ 0.11
NEFM-205ENST00000521540 DHX32Q7L7V1 743 aaKnown RBP15.74■□□□□ 0.11
NEFM-205ENST00000521540 ZSCAN16Q9H4T2 348 aaPredicted RBP15.74■□□□□ 0.11
NEFM-205ENST00000521540 ZFYP08048 801 aaPredicted RBP15.74■□□□□ 0.11
NEFM-205ENST00000521540 HSP90B1P14625 803 aaKnown RBP15.74■□□□□ 0.11
NEFM-205ENST00000521540 KIF6Q6ZMV9 814 aa15.74■□□□□ 0.11
NEFM-205ENST00000521540 CCDC129Q6ZRS4 1044 aa15.74■□□□□ 0.11
NEFM-205ENST00000521540 CDC37L1Q7L3B6 337 aa15.74■□□□□ 0.11
NEFM-205ENST00000521540 FUCA2Q9BTY2 467 aa15.74■□□□□ 0.11
NEFM-205ENST00000521540 TAF6LQ9Y6J9 622 aa15.74■□□□□ 0.11
NEFM-205ENST00000521540 A0A1B0GUL7 405 aa15.73■□□□□ 0.11
NEFM-205ENST00000521540 PFKFB2O60825 505 aa15.73■□□□□ 0.11
NEFM-205ENST00000521540 HMGN5P82970 282 aaKnown RBP15.73■□□□□ 0.11
NEFM-205ENST00000521540 CCDC158Q5M9N0 1113 aa15.73■□□□□ 0.11
NEFM-205ENST00000521540 SEC62Q99442 399 aaKnown RBP15.73■□□□□ 0.11
NEFM-205ENST00000521540 PTMAP06454 111 aaKnown RBP15.72■□□□□ 0.11
NEFM-205ENST00000521540 TIMM10P62072 90 aa15.72■□□□□ 0.11
NEFM-205ENST00000521540 HSP90AB3PQ58FF7 597 aa15.72■□□□□ 0.11
NEFM-205ENST00000521540 SMARCC2Q8TAQ2 1214 aa15.72■□□□□ 0.11
NEFM-205ENST00000521540 UPF1Q92900 1129 aaKnown RBP eCLIP15.72■□□□□ 0.11
NEFM-205ENST00000521540 TCEANC2Q96MN5 208 aa15.72■□□□□ 0.11
NEFM-205ENST00000521540 AGXT2Q9BYV1 514 aa15.72■□□□□ 0.11
NEFM-205ENST00000521540 RGPD3A6NKT7 1758 aaPredicted RBP15.72■□□□□ 0.11
NEFM-205ENST00000521540 RGPD4Q7Z3J3 1758 aa15.72■□□□□ 0.11
NEFM-205ENST00000521540 STARD3NLO95772 234 aa15.71■□□□□ 0.11
NEFM-205ENST00000521540 CCDC192P0DO97 292 aa15.71■□□□□ 0.11
NEFM-205ENST00000521540 FGD1P98174 961 aa15.71■□□□□ 0.11
NEFM-205ENST00000521540 LRRC24Q50LG9 513 aa15.71■□□□□ 0.11
NEFM-205ENST00000521540 TTC6Q86TZ1 520 aa15.71■□□□□ 0.11
NEFM-205ENST00000521540 DDX19AQ9NUU7 478 aaKnown RBP15.71■□□□□ 0.11
NEFM-205ENST00000521540 CTNNA3Q9UI47 895 aa15.71■□□□□ 0.11
NEFM-205ENST00000521540 CDHR2Q9BYE9 1310 aa15.71■□□□□ 0.11
NEFM-205ENST00000521540 GOLGA6L4A6NEF3 574 aa15.71■□□□□ 0.11
NEFM-205ENST00000521540 CSF1RP07333 972 aa15.71■□□□□ 0.11
NEFM-205ENST00000521540 EXOSC10Q01780 885 aaKnown RBP15.71■□□□□ 0.11
NEFM-205ENST00000521540 STK3Q13188 491 aa15.71■□□□□ 0.11
NEFM-205ENST00000521540 FBXL16Q8N461 479 aa15.71■□□□□ 0.11
NEFM-205ENST00000521540 SPATA32Q96LK8 384 aa15.71■□□□□ 0.11
NEFM-205ENST00000521540 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.71■□□□□ 0.11
NEFM-205ENST00000521540 NDUFB9Q9Y6M9 179 aa15.71■□□□□ 0.11
NEFM-205ENST00000521540 LY75O60449 1722 aa15.7■□□□□ 0.1
NEFM-205ENST00000521540 H3BQV1 296 aa15.7■□□□□ 0.1
NEFM-205ENST00000521540 TTC39AQ5SRH9 613 aa15.7■□□□□ 0.1
NEFM-205ENST00000521540 IFFO2Q5TF58 517 aa15.7■□□□□ 0.1
NEFM-205ENST00000521540 ATL3Q6DD88 541 aa15.7■□□□□ 0.1
NEFM-205ENST00000521540 NAA16Q6N069 864 aaPredicted RBP15.7■□□□□ 0.1
NEFM-205ENST00000521540 ZBTB38Q8NAP3 1195 aaPredicted RBP15.7■□□□□ 0.1
NEFM-205ENST00000521540 CFAP45Q9UL16 551 aa15.7■□□□□ 0.1
NEFM-205ENST00000521540 ASAP1Q9ULH1 1129 aa15.7■□□□□ 0.1
NEFM-205ENST00000521540 KDM4AO75164 1064 aa15.69■□□□□ 0.1
NEFM-205ENST00000521540 HSPD1P10809 573 aaKnown RBP15.69■□□□□ 0.1
NEFM-205ENST00000521540 HCLS1P14317 486 aaPredicted RBP15.69■□□□□ 0.1
NEFM-205ENST00000521540 RESTQ13127 1097 aa15.69■□□□□ 0.1
NEFM-205ENST00000521540 COL9A3Q14050 684 aaPredicted RBP15.69■□□□□ 0.1
NEFM-205ENST00000521540 MAP3K11Q16584 847 aa15.69■□□□□ 0.1
NEFM-205ENST00000521540 GORABQ5T7V8 394 aa15.69■□□□□ 0.1
NEFM-205ENST00000521540 BRF1Q92994 677 aa15.69■□□□□ 0.1
NEFM-205ENST00000521540 ZNF274Q96GC6 653 aaPredicted RBP15.69■□□□□ 0.1
NEFM-205ENST00000521540 ZNF594Q96JF6 807 aaPredicted RBP15.69■□□□□ 0.1
NEFM-205ENST00000521540 NUP62CLQ9H1M0 184 aa15.69■□□□□ 0.1
NEFM-205ENST00000521540 MAST3O60307 1309 aa15.69■□□□□ 0.1
NEFM-205ENST00000521540 TPM3P06753 285 aa15.69■□□□□ 0.1
NEFM-205ENST00000521540 IFIT5Q13325 482 aaKnown RBP15.69■□□□□ 0.1
NEFM-205ENST00000521540 GIMAP6Q6P9H5 292 aa15.69■□□□□ 0.1
NEFM-205ENST00000521540 STOX1Q6ZVD7 989 aa15.69■□□□□ 0.1
NEFM-205ENST00000521540 FERMT3Q86UX7 667 aa15.69■□□□□ 0.1
NEFM-205ENST00000521540 CCDC125Q86Z20 511 aa15.69■□□□□ 0.1
NEFM-205ENST00000521540 LEO1Q8WVC0 666 aaPredicted RBP15.69■□□□□ 0.1
NEFM-205ENST00000521540 MYH15Q9Y2K3 1946 aa15.69■□□□□ 0.1
NEFM-205ENST00000521540 MAP3K15Q6ZN16 1313 aa15.68■□□□□ 0.1
NEFM-205ENST00000521540 ANKRD36CQ5JPF3 1778 aa15.68■□□□□ 0.1
NEFM-205ENST00000521540 E7EWF7 191 aa15.68■□□□□ 0.1
NEFM-205ENST00000521540 TAF7LQ5H9L4 462 aa15.68■□□□□ 0.1
NEFM-205ENST00000521540 SMARCC1Q92922 1105 aaPredicted RBP15.68■□□□□ 0.1
NEFM-205ENST00000521540 CICQ96RK0 1608 aaPredicted RBP15.68■□□□□ 0.1
NEFM-205ENST00000521540 APBA3O96018 575 aa15.67■□□□□ 0.1
NEFM-205ENST00000521540 SCRN1Q12765 414 aa15.67■□□□□ 0.1
NEFM-205ENST00000521540 GIGYF2Q6Y7W6 1299 aaKnown RBP15.67■□□□□ 0.1
NEFM-205ENST00000521540 XAGE2Q96GT9 111 aa15.67■□□□□ 0.1
NEFM-205ENST00000521540 PUS3Q9BZE2 481 aaKnown RBP15.67■□□□□ 0.1
NEFM-205ENST00000521540 MYH7P12883 1935 aa15.67■□□□□ 0.1
NEFM-205ENST00000521540 ZNF831Q5JPB2 1677 aa15.67■□□□□ 0.1
NEFM-205ENST00000521540 PLSCR1O15162 318 aa15.67■□□□□ 0.1
NEFM-205ENST00000521540 ADCY5O95622 1261 aa15.67■□□□□ 0.1
NEFM-205ENST00000521540 SF3B2Q13435 895 aaKnown RBP15.67■□□□□ 0.1
NEFM-205ENST00000521540 ZSCAN25Q6NSZ9 544 aa15.67■□□□□ 0.1
NEFM-205ENST00000521540 ZNF512BQ96KM6 892 aaPredicted RBP15.67■□□□□ 0.1
NEFM-205ENST00000521540 USP25Q9UHP3 1055 aa15.67■□□□□ 0.1
NEFM-205ENST00000521540 JAK2O60674 1132 aa15.66■□□□□ 0.1
NEFM-205ENST00000521540 EVCP57679 992 aa15.66■□□□□ 0.1
NEFM-205ENST00000521540 RBM43Q6ZSC3 357 aaKnown RBP15.66■□□□□ 0.1
NEFM-205ENST00000521540 DNAJC10Q8IXB1 793 aa15.66■□□□□ 0.1
NEFM-205ENST00000521540 NSUN7Q8NE18 718 aaKnown RBP15.66■□□□□ 0.1
NEFM-205ENST00000521540 MYH3P11055 1940 aa15.66■□□□□ 0.1
NEFM-205ENST00000521540 CAVIN2O95810 425 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms