RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 CLMNQ96JQ2 1002 aa10.23□□□□□ -0.77
HMBOX1-208ENST00000521516 WNT10BO00744 389 aa10.22□□□□□ -0.77
HMBOX1-208ENST00000521516 POTEB2H3BUK9 544 aa10.22□□□□□ -0.77
HMBOX1-208ENST00000521516 HCLS1P14317 486 aaPredicted RBP10.22□□□□□ -0.77
HMBOX1-208ENST00000521516 TDHQ8IZJ6 230 aa10.22□□□□□ -0.77
HMBOX1-208ENST00000521516 ZC3H12CQ9C0D7 883 aaKnown RBP10.22□□□□□ -0.77
HMBOX1-208ENST00000521516 LAMA2P24043 3122 aaKnown RBP10.21□□□□□ -0.77
HMBOX1-208ENST00000521516 COL1A1P02452 1464 aaPredicted RBP10.21□□□□□ -0.77
HMBOX1-208ENST00000521516 SYNGAP1Q96PV0 1343 aa10.21□□□□□ -0.77
HMBOX1-208ENST00000521516 CCL5P13501 91 aa10.21□□□□□ -0.77
HMBOX1-208ENST00000521516 ARHGAP39Q9C0H5 1083 aa10.21□□□□□ -0.77
HMBOX1-208ENST00000521516 ZFYVE28Q9HCC9 887 aa10.21□□□□□ -0.77
HMBOX1-208ENST00000521516 FZD1Q9UP38 647 aa10.21□□□□□ -0.77
HMBOX1-208ENST00000521516 CAPN2P17655 700 aa10.21□□□□□ -0.78
HMBOX1-208ENST00000521516 APOBEC3FQ8IUX4 373 aaKnown RBP10.21□□□□□ -0.78
HMBOX1-208ENST00000521516 PODXL2Q9NZ53 605 aa10.21□□□□□ -0.78
HMBOX1-208ENST00000521516 TNFRSF10AO00220 468 aa10.2□□□□□ -0.78
HMBOX1-208ENST00000521516 DIAPH1O60610 1272 aaKnown RBP10.2□□□□□ -0.78
HMBOX1-208ENST00000521516 LACTBP83111 547 aaPredicted RBP10.2□□□□□ -0.78
HMBOX1-208ENST00000521516 U2AF1L4Q8WU68 220 aaKnown RBP10.2□□□□□ -0.78
HMBOX1-208ENST00000521516 CELF1Q92879 486 aaKnown RBP10.2□□□□□ -0.78
HMBOX1-208ENST00000521516 MS4A4AQ96JQ5 239 aa10.2□□□□□ -0.78
HMBOX1-208ENST00000521516 ZSWIM8A7E2V4 1837 aa10.2□□□□□ -0.78
HMBOX1-208ENST00000521516 PANK3Q9H999 370 aa10.19□□□□□ -0.78
HMBOX1-208ENST00000521516 PIEZO1Q92508 2521 aa10.19□□□□□ -0.78
HMBOX1-208ENST00000521516 USP17L3A6NCW0 530 aa10.19□□□□□ -0.78
HMBOX1-208ENST00000521516 USP17L4A6NCW7 530 aa10.19□□□□□ -0.78
HMBOX1-208ENST00000521516 TAF1CQ15572 869 aaPredicted RBP10.19□□□□□ -0.78
HMBOX1-208ENST00000521516 USP17L1Q7RTZ2 530 aa10.19□□□□□ -0.78
HMBOX1-208ENST00000521516 RNF208Q9H0X6 261 aa10.19□□□□□ -0.78
HMBOX1-208ENST00000521516 RRP7AQ9Y3A4 280 aaKnown RBP10.19□□□□□ -0.78
HMBOX1-208ENST00000521516 ALPK3Q96L96 1907 aa10.19□□□□□ -0.78
HMBOX1-208ENST00000521516 COL4A1P02462 1669 aa10.19□□□□□ -0.78
HMBOX1-208ENST00000521516 IRS2Q9Y4H2 1338 aa10.18□□□□□ -0.78
HMBOX1-208ENST00000521516 PPP1R12BO60237 982 aaPredicted RBP10.18□□□□□ -0.78
HMBOX1-208ENST00000521516 SGPL1O95470 568 aa10.18□□□□□ -0.78
HMBOX1-208ENST00000521516 GRK4P32298 578 aa10.18□□□□□ -0.78
HMBOX1-208ENST00000521516 MMP14P50281 582 aa10.18□□□□□ -0.78
HMBOX1-208ENST00000521516 KIF22Q14807 665 aa10.18□□□□□ -0.78
HMBOX1-208ENST00000521516 BRI3BPQ8WY22 251 aa10.18□□□□□ -0.78
HMBOX1-208ENST00000521516 ZBED3Q96IU2 234 aaPredicted RBP10.18□□□□□ -0.78
HMBOX1-208ENST00000521516 COL2A1P02458 1487 aaPredicted RBP10.18□□□□□ -0.78
HMBOX1-208ENST00000521516 NLRP10Q86W26 655 aa10.18□□□□□ -0.78
HMBOX1-208ENST00000521516 SRRDQ9UH36 339 aa10.18□□□□□ -0.78
HMBOX1-208ENST00000521516 SH3TC1Q8TE82 1336 aa10.17□□□□□ -0.78
HMBOX1-208ENST00000521516 G3V3G9 751 aa10.17□□□□□ -0.78
HMBOX1-208ENST00000521516 MAGEA10P43363 369 aaPredicted RBP10.17□□□□□ -0.78
HMBOX1-208ENST00000521516 MAP3K12Q12852 859 aa10.17□□□□□ -0.78
HMBOX1-208ENST00000521516 SF3B3Q15393 1217 aaKnown RBP10.17□□□□□ -0.78
HMBOX1-208ENST00000521516 DCAF8Q5TAQ9 597 aa10.17□□□□□ -0.78
HMBOX1-208ENST00000521516 RIPOR2Q9Y4F9 1068 aa10.17□□□□□ -0.78
HMBOX1-208ENST00000521516 TLR2O60603 784 aa10.17□□□□□ -0.78
HMBOX1-208ENST00000521516 SASH1O94885 1247 aa10.17□□□□□ -0.78
HMBOX1-208ENST00000521516 MYL6BP14649 208 aa10.17□□□□□ -0.78
HMBOX1-208ENST00000521516 LRP10Q7Z4F1 713 aa10.17□□□□□ -0.78
HMBOX1-208ENST00000521516 PODNQ7Z5L7 613 aa10.17□□□□□ -0.78
HMBOX1-208ENST00000521516 OGFOD1Q8N543 542 aa10.17□□□□□ -0.78
HMBOX1-208ENST00000521516 MAFAQ8NHW3 353 aaPredicted RBP10.17□□□□□ -0.78
HMBOX1-208ENST00000521516 SNX27Q96L92 541 aa10.17□□□□□ -0.78
HMBOX1-208ENST00000521516 DEFB129Q9H1M3 183 aa10.17□□□□□ -0.78
HMBOX1-208ENST00000521516 ARIH1Q9Y4X5 557 aaPredicted RBP10.17□□□□□ -0.78
HMBOX1-208ENST00000521516 DACT2Q5SW24 774 aa10.16□□□□□ -0.78
HMBOX1-208ENST00000521516 FAM43AQ8N2R8 423 aa10.16□□□□□ -0.78
HMBOX1-208ENST00000521516 PHACTR3Q96KR7 559 aa10.16□□□□□ -0.78
HMBOX1-208ENST00000521516 ZMYND8Q9ULU4 1186 aaPredicted RBP10.16□□□□□ -0.78
HMBOX1-208ENST00000521516 PPP2R3BQ9Y5P8 575 aa10.16□□□□□ -0.78
HMBOX1-208ENST00000521516 COL3A1P02461 1466 aaPredicted RBP10.15□□□□□ -0.78
HMBOX1-208ENST00000521516 TMEM265A0A087WTH1 108 aa10.15□□□□□ -0.78
HMBOX1-208ENST00000521516 UFL1O94874 794 aa10.15□□□□□ -0.78
HMBOX1-208ENST00000521516 CTGFP29279 349 aa10.15□□□□□ -0.78
HMBOX1-208ENST00000521516 UBXN2AP68543 259 aa10.15□□□□□ -0.78
HMBOX1-208ENST00000521516 ANKRD13AQ8IZ07 590 aa10.15□□□□□ -0.78
HMBOX1-208ENST00000521516 TRIM47Q96LD4 638 aa10.15□□□□□ -0.78
HMBOX1-208ENST00000521516 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.15□□□□□ -0.78
HMBOX1-208ENST00000521516 IREB2P48200 963 aaKnown RBP10.15□□□□□ -0.78
HMBOX1-208ENST00000521516 MCM10Q7L590 875 aa10.15□□□□□ -0.78
HMBOX1-208ENST00000521516 OPTNQ96CV9 577 aa10.15□□□□□ -0.78
HMBOX1-208ENST00000521516 UNC93B1Q9H1C4 597 aa10.15□□□□□ -0.78
HMBOX1-208ENST00000521516 ZCCHC17Q9NP64 241 aaKnown RBP10.15□□□□□ -0.78
HMBOX1-208ENST00000521516 TRMT112Q9UI30 125 aaKnown RBP10.15□□□□□ -0.78
HMBOX1-208ENST00000521516 GGA1Q9UJY5 639 aa10.15□□□□□ -0.78
HMBOX1-208ENST00000521516 FAM205AQ6ZU69 1335 aa10.15□□□□□ -0.79
HMBOX1-208ENST00000521516 MYO3BQ8WXR4 1341 aa10.15□□□□□ -0.79
HMBOX1-208ENST00000521516 CCL15-CCL14A0A0B4J2E2 113 aa10.14□□□□□ -0.79
HMBOX1-208ENST00000521516 USP2O75604 605 aaPredicted RBP10.14□□□□□ -0.79
HMBOX1-208ENST00000521516 CCL15Q16663 113 aa10.14□□□□□ -0.79
HMBOX1-208ENST00000521516 TJAP1Q5JTD0 557 aa10.14□□□□□ -0.79
HMBOX1-208ENST00000521516 C7orf61Q8IZ16 206 aa10.14□□□□□ -0.79
HMBOX1-208ENST00000521516 RAET1EQ8TD07 263 aa10.14□□□□□ -0.79
HMBOX1-208ENST00000521516 CDX2Q99626 313 aaPredicted RBP10.14□□□□□ -0.79
HMBOX1-208ENST00000521516 UBE2OQ9C0C9 1292 aaKnown RBP10.14□□□□□ -0.79
HMBOX1-208ENST00000521516 OSBPP22059 807 aa10.14□□□□□ -0.79
HMBOX1-208ENST00000521516 HOXD10P28358 340 aa10.14□□□□□ -0.79
HMBOX1-208ENST00000521516 GTF2A2P52657 109 aa10.14□□□□□ -0.79
HMBOX1-208ENST00000521516 RPS8P62241 208 aaKnown RBP10.14□□□□□ -0.79
HMBOX1-208ENST00000521516 SUPT20HL1Q3ZLR7 823 aa10.14□□□□□ -0.79
HMBOX1-208ENST00000521516 HSP90AB3PQ58FF7 597 aa10.14□□□□□ -0.79
HMBOX1-208ENST00000521516 HELBQ8NG08 1087 aaPredicted RBP10.14□□□□□ -0.79
HMBOX1-208ENST00000521516 CRISPLD2Q9H0B8 497 aa10.14□□□□□ -0.79
HMBOX1-208ENST00000521516 BDP1A6H8Y1 2624 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms