RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 SLC6A14Q9UN76 642 aa10.91□□□□□ -0.66
NUDCD1-204ENST00000521439 GADD45BO75293 160 aaPredicted RBP10.9□□□□□ -0.66
NUDCD1-204ENST00000521439 COL13A1Q5TAT6 717 aaPredicted RBP10.9□□□□□ -0.66
NUDCD1-204ENST00000521439 KIAA0319Q5VV43 1072 aa10.9□□□□□ -0.66
NUDCD1-204ENST00000521439 NOP53Q9NZM5 478 aaKnown RBP10.9□□□□□ -0.66
NUDCD1-204ENST00000521439 VTI1BQ9UEU0 232 aa10.9□□□□□ -0.66
NUDCD1-204ENST00000521439 ZBTB42B2RXF5 422 aa10.89□□□□□ -0.67
NUDCD1-204ENST00000521439 M0R082 166 aa10.89□□□□□ -0.67
NUDCD1-204ENST00000521439 GPLD1P80108 840 aa10.89□□□□□ -0.67
NUDCD1-204ENST00000521439 PEAR1Q5VY43 1037 aaPredicted RBP10.89□□□□□ -0.67
NUDCD1-204ENST00000521439 ALYREFQ86V81 257 aaKnown RBP10.89□□□□□ -0.67
NUDCD1-204ENST00000521439 ZNF417Q8TAU3 575 aa10.89□□□□□ -0.67
NUDCD1-204ENST00000521439 NSUN5Q96P11 429 aaKnown RBP10.89□□□□□ -0.67
NUDCD1-204ENST00000521439 ZNF587Q96SQ5 575 aaPredicted RBP10.89□□□□□ -0.67
NUDCD1-204ENST00000521439 BACH2Q9BYV9 841 aa10.89□□□□□ -0.67
NUDCD1-204ENST00000521439 PRDM6Q9NQX0 595 aa10.89□□□□□ -0.67
NUDCD1-204ENST00000521439 LATS2Q9NRM7 1088 aa10.89□□□□□ -0.67
NUDCD1-204ENST00000521439 STARD13Q9Y3M8 1113 aa10.89□□□□□ -0.67
NUDCD1-204ENST00000521439 LOC102724428A0A0B4J2F2 783 aa10.88□□□□□ -0.67
NUDCD1-204ENST00000521439 A0A1W2PP55 124 aa10.88□□□□□ -0.67
NUDCD1-204ENST00000521439 RECKO95980 971 aa10.88□□□□□ -0.67
NUDCD1-204ENST00000521439 ALBP02768 609 aa10.88□□□□□ -0.67
NUDCD1-204ENST00000521439 EIF4BP23588 611 aaKnown RBP10.88□□□□□ -0.67
NUDCD1-204ENST00000521439 SIK1P57059 783 aa10.88□□□□□ -0.67
NUDCD1-204ENST00000521439 TSNAXIP1Q2TAA8 658 aa10.88□□□□□ -0.67
NUDCD1-204ENST00000521439 MICALL1Q8N3F8 863 aa10.88□□□□□ -0.67
NUDCD1-204ENST00000521439 OSBPL7Q9BZF2 842 aa10.88□□□□□ -0.67
NUDCD1-204ENST00000521439 SUV39H2Q9H5I1 410 aa10.88□□□□□ -0.67
NUDCD1-204ENST00000521439 C12orf49Q9H741 205 aa10.88□□□□□ -0.67
NUDCD1-204ENST00000521439 CEP120Q8N960 986 aa10.87□□□□□ -0.67
NUDCD1-204ENST00000521439 SPACA7Q96KW9 195 aa10.87□□□□□ -0.67
NUDCD1-204ENST00000521439 BCO2Q9BYV7 579 aa10.87□□□□□ -0.67
NUDCD1-204ENST00000521439 SRCIN1Q9C0H9 1055 aa10.87□□□□□ -0.67
NUDCD1-204ENST00000521439 MLLT1Q03111 559 aaPredicted RBP10.86□□□□□ -0.67
NUDCD1-204ENST00000521439 GRM2Q14416 872 aa10.86□□□□□ -0.67
NUDCD1-204ENST00000521439 C20orf204Q6ZNR8 217 aa10.86□□□□□ -0.67
NUDCD1-204ENST00000521439 DCAF5Q96JK2 942 aa10.86□□□□□ -0.67
NUDCD1-204ENST00000521439 EHD4Q9H223 541 aa10.86□□□□□ -0.67
NUDCD1-204ENST00000521439 IGSF5Q9NSI5 407 aa10.86□□□□□ -0.67
NUDCD1-204ENST00000521439 J3QW42 95 aa10.85□□□□□ -0.67
NUDCD1-204ENST00000521439 NXPE4Q6UWF7 544 aa10.85□□□□□ -0.67
NUDCD1-204ENST00000521439 HFE2Q6ZVN8 426 aa10.85□□□□□ -0.67
NUDCD1-204ENST00000521439 OSMRQ99650 979 aa10.85□□□□□ -0.67
NUDCD1-204ENST00000521439 PPP4R2Q9NY27 417 aa10.85□□□□□ -0.67
NUDCD1-204ENST00000521439 TRAK1Q9UPV9 953 aa10.85□□□□□ -0.67
NUDCD1-204ENST00000521439 LILRB5O75023 590 aa10.84□□□□□ -0.67
NUDCD1-204ENST00000521439 LDLRAD1Q5T700 205 aa10.84□□□□□ -0.67
NUDCD1-204ENST00000521439 FAM35AQ86V20 835 aa10.84□□□□□ -0.67
NUDCD1-204ENST00000521439 TRIM11Q96F44 468 aa10.84□□□□□ -0.67
NUDCD1-204ENST00000521439 ZKSCAN3Q9BRR0 538 aa10.84□□□□□ -0.67
NUDCD1-204ENST00000521439 DZANK1Q9NVP4 752 aa10.84□□□□□ -0.67
NUDCD1-204ENST00000521439 FAM8A1Q9UBU6 413 aa10.84□□□□□ -0.67
NUDCD1-204ENST00000521439 NAGPAQ9UK23 515 aa10.84□□□□□ -0.67
NUDCD1-204ENST00000521439 SPDYE3A6NKU9 549 aa10.83□□□□□ -0.68
NUDCD1-204ENST00000521439 CTSHP09668 335 aa10.83□□□□□ -0.68
NUDCD1-204ENST00000521439 ACPPP15309 386 aa10.83□□□□□ -0.68
NUDCD1-204ENST00000521439 COL8A1P27658 744 aa10.83□□□□□ -0.68
NUDCD1-204ENST00000521439 PSAPL1Q6NUJ1 521 aa10.83□□□□□ -0.68
NUDCD1-204ENST00000521439 TMEM87AQ8NBN3 555 aa10.83□□□□□ -0.68
NUDCD1-204ENST00000521439 GLIS3Q8NEA6 775 aa10.83□□□□□ -0.68
NUDCD1-204ENST00000521439 CRELD1Q96HD1 420 aa10.83□□□□□ -0.68
NUDCD1-204ENST00000521439 RBSNQ9H1K0 784 aa10.83□□□□□ -0.68
NUDCD1-204ENST00000521439 LIN7BQ9HAP6 207 aa10.83□□□□□ -0.68
NUDCD1-204ENST00000521439 GHRHP01286 108 aa10.82□□□□□ -0.68
NUDCD1-204ENST00000521439 TCF3P15923 654 aa10.82□□□□□ -0.68
NUDCD1-204ENST00000521439 C8orf86Q6ZUL3 223 aa10.82□□□□□ -0.68
NUDCD1-204ENST00000521439 PLVAPQ9BX97 442 aa10.82□□□□□ -0.68
NUDCD1-204ENST00000521439 JPH1Q9HDC5 661 aaPredicted RBP10.82□□□□□ -0.68
NUDCD1-204ENST00000521439 FRRS1LQ9P0K9 344 aa10.82□□□□□ -0.68
NUDCD1-204ENST00000521439 NFKBIEO00221 500 aa10.81□□□□□ -0.68
NUDCD1-204ENST00000521439 RGS9O75916 674 aaPredicted RBP10.81□□□□□ -0.68
NUDCD1-204ENST00000521439 CPB1P15086 417 aa10.81□□□□□ -0.68
NUDCD1-204ENST00000521439 EIF2AK2P19525 551 aaKnown RBP10.81□□□□□ -0.68
NUDCD1-204ENST00000521439 COL9A3Q14050 684 aaPredicted RBP10.81□□□□□ -0.68
NUDCD1-204ENST00000521439 PRPF40BQ6NWY9 871 aaKnown RBP10.81□□□□□ -0.68
NUDCD1-204ENST00000521439 NUDT8Q8WV74 236 aa10.81□□□□□ -0.68
NUDCD1-204ENST00000521439 TCF12Q99081 682 aa10.81□□□□□ -0.68
NUDCD1-204ENST00000521439 PBX4Q9BYU1 374 aa10.81□□□□□ -0.68
NUDCD1-204ENST00000521439 SCAMP3O14828 347 aaKnown RBP10.8□□□□□ -0.68
NUDCD1-204ENST00000521439 TRPA1O75762 1119 aa10.8□□□□□ -0.68
NUDCD1-204ENST00000521439 USP17L7P0C7H9 530 aa10.8□□□□□ -0.68
NUDCD1-204ENST00000521439 NID1P14543 1247 aa10.8□□□□□ -0.68
NUDCD1-204ENST00000521439 CCNJLQ8IV13 435 aa10.8□□□□□ -0.68
NUDCD1-204ENST00000521439 TMEM102Q8N9M5 508 aaPredicted RBP10.8□□□□□ -0.68
NUDCD1-204ENST00000521439 LPIN3Q9BQK8 851 aa10.8□□□□□ -0.68
NUDCD1-204ENST00000521439 RASSF4Q9H2L5 321 aa10.8□□□□□ -0.68
NUDCD1-204ENST00000521439 GSTT1P30711 240 aa10.79□□□□□ -0.68
NUDCD1-204ENST00000521439 ATP11AP98196 1134 aa10.79□□□□□ -0.68
NUDCD1-204ENST00000521439 PERM1Q5SV97 790 aa10.79□□□□□ -0.68
NUDCD1-204ENST00000521439 ELMSAN1Q6PJG2 1045 aa10.79□□□□□ -0.68
NUDCD1-204ENST00000521439 TMEM238LA0A1B0GVL6 79 aa10.78□□□□□ -0.68
NUDCD1-204ENST00000521439 PDE2AO00408 941 aaPredicted RBP10.78□□□□□ -0.68
NUDCD1-204ENST00000521439 NXPE3Q969Y0 559 aa10.78□□□□□ -0.68
NUDCD1-204ENST00000521439 BHLHE41Q9C0J9 482 aaPredicted RBP10.78□□□□□ -0.68
NUDCD1-204ENST00000521439 ABCB6Q9NP58 842 aa10.78□□□□□ -0.68
NUDCD1-204ENST00000521439 SMNDC1O75940 238 aaKnown RBP eCLIP10.77□□□□□ -0.69
NUDCD1-204ENST00000521439 XRCC5P13010 732 aaKnown RBP10.77□□□□□ -0.69
NUDCD1-204ENST00000521439 AFF1P51825 1210 aaKnown RBP10.77□□□□□ -0.69
NUDCD1-204ENST00000521439 FCGRTP55899 365 aa10.77□□□□□ -0.69
NUDCD1-204ENST00000521439 PLA2G4EQ3MJ16 856 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms