RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 EYA3Q99504 573 aa10.53□□□□□ -0.72
CSMD1-209ENST00000520630 ZC3H12CQ9C0D7 883 aaKnown RBP10.53□□□□□ -0.72
CSMD1-209ENST00000520630 RBM27Q9P2N5 1060 aaKnown RBP10.53□□□□□ -0.72
CSMD1-209ENST00000520630 UFL1O94874 794 aa10.52□□□□□ -0.73
CSMD1-209ENST00000520630 KRT24Q2M2I5 525 aa10.52□□□□□ -0.73
CSMD1-209ENST00000520630 HSP90AB3PQ58FF7 597 aa10.52□□□□□ -0.73
CSMD1-209ENST00000520630 RTL5Q5HYW3 569 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-209ENST00000520630 ZBED3Q96IU2 234 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-209ENST00000520630 CLMNQ96JQ2 1002 aa10.52□□□□□ -0.73
CSMD1-209ENST00000520630 PTPN18Q99952 460 aa10.52□□□□□ -0.73
CSMD1-209ENST00000520630 SPTBN5Q9NRC6 3674 aaKnown RBP10.51□□□□□ -0.73
CSMD1-209ENST00000520630 ATP5J2-PTCD1G3V325 749 aa10.51□□□□□ -0.73
CSMD1-209ENST00000520630 CRHR2Q13324 411 aa10.51□□□□□ -0.73
CSMD1-209ENST00000520630 TTLL12Q14166 644 aaPredicted RBP10.51□□□□□ -0.73
CSMD1-209ENST00000520630 NFE2L2Q16236 605 aa10.51□□□□□ -0.73
CSMD1-209ENST00000520630 DACT2Q5SW24 774 aa10.51□□□□□ -0.73
CSMD1-209ENST00000520630 CFAP53Q96M91 514 aa10.51□□□□□ -0.73
CSMD1-209ENST00000520630 NUDCQ9Y266 331 aa10.51□□□□□ -0.73
CSMD1-209ENST00000520630 SASH1O94885 1247 aa10.5□□□□□ -0.73
CSMD1-209ENST00000520630 MAP3K11Q16584 847 aa10.5□□□□□ -0.73
CSMD1-209ENST00000520630 CHRDL2Q6WN34 429 aa10.5□□□□□ -0.73
CSMD1-209ENST00000520630 SLC17A8Q8NDX2 589 aa10.5□□□□□ -0.73
CSMD1-209ENST00000520630 WNK4Q96J92 1243 aa10.5□□□□□ -0.73
CSMD1-209ENST00000520630 ANGEL1Q9UNK9 670 aaKnown RBP10.5□□□□□ -0.73
CSMD1-209ENST00000520630 PTPRFP10586 1907 aa10.5□□□□□ -0.73
CSMD1-209ENST00000520630 PRUNE2Q8WUY3 3088 aa10.49□□□□□ -0.73
CSMD1-209ENST00000520630 AK9Q5TCS8 1911 aa10.49□□□□□ -0.73
CSMD1-209ENST00000520630 USP17L3A6NCW0 530 aa10.49□□□□□ -0.73
CSMD1-209ENST00000520630 USP17L4A6NCW7 530 aa10.49□□□□□ -0.73
CSMD1-209ENST00000520630 MANSC4A6NHS7 340 aaPredicted RBP10.49□□□□□ -0.73
CSMD1-209ENST00000520630 IRS4O14654 1257 aaPredicted RBP10.49□□□□□ -0.73
CSMD1-209ENST00000520630 ALDH1A1P00352 501 aa10.49□□□□□ -0.73
CSMD1-209ENST00000520630 USP17L1Q7RTZ2 530 aa10.49□□□□□ -0.73
CSMD1-209ENST00000520630 TXNRD3Q86VQ6 643 aa10.49□□□□□ -0.73
CSMD1-209ENST00000520630 SHISA4Q96DD7 197 aa10.49□□□□□ -0.73
CSMD1-209ENST00000520630 ERO1AQ96HE7 468 aa10.49□□□□□ -0.73
CSMD1-209ENST00000520630 TSPYL4Q9UJ04 414 aa10.49□□□□□ -0.73
CSMD1-209ENST00000520630 GGA1Q9UJY5 639 aa10.49□□□□□ -0.73
CSMD1-209ENST00000520630 PCDHAC2Q9Y5I4 1007 aa10.49□□□□□ -0.73
CSMD1-209ENST00000520630 PTCH2Q9Y6C5 1203 aa10.49□□□□□ -0.73
CSMD1-209ENST00000520630 AOX1Q06278 1338 aa10.49□□□□□ -0.73
CSMD1-209ENST00000520630 TESPA1A2RU30 521 aaPredicted RBP10.48□□□□□ -0.73
CSMD1-209ENST00000520630 SOX1O00570 391 aaPredicted RBP10.48□□□□□ -0.73
CSMD1-209ENST00000520630 ARMC9Q7Z3E5 817 aa10.48□□□□□ -0.73
CSMD1-209ENST00000520630 PODNQ7Z5L7 613 aa10.48□□□□□ -0.73
CSMD1-209ENST00000520630 PLBD2Q8NHP8 589 aa10.48□□□□□ -0.73
CSMD1-209ENST00000520630 EFCC1Q9HA90 598 aa10.48□□□□□ -0.73
CSMD1-209ENST00000520630 CHPF2Q9P2E5 772 aa10.48□□□□□ -0.73
CSMD1-209ENST00000520630 CACNA1FO60840 1977 aa10.47□□□□□ -0.73
CSMD1-209ENST00000520630 ZBTB48P10074 688 aaPredicted RBP10.47□□□□□ -0.73
CSMD1-209ENST00000520630 INHBEP58166 350 aa10.47□□□□□ -0.73
CSMD1-209ENST00000520630 SP3Q02447 781 aa10.47□□□□□ -0.73
CSMD1-209ENST00000520630 TRIM28Q13263 835 aaKnown RBP10.47□□□□□ -0.73
CSMD1-209ENST00000520630 UBE2Q1Q7Z7E8 422 aa10.47□□□□□ -0.73
CSMD1-209ENST00000520630 JARID2Q92833 1246 aaPredicted RBP10.47□□□□□ -0.73
CSMD1-209ENST00000520630 ANKIB1Q9P2G1 1089 aa10.47□□□□□ -0.73
CSMD1-209ENST00000520630 COL1A1P02452 1464 aaPredicted RBP10.47□□□□□ -0.73
CSMD1-209ENST00000520630 ANKRD13DQ6ZTN6 518 aa10.46□□□□□ -0.73
CSMD1-209ENST00000520630 MIER1Q8N108 512 aa10.46□□□□□ -0.73
CSMD1-209ENST00000520630 SLC10A4Q96EP9 437 aa10.46□□□□□ -0.73
CSMD1-209ENST00000520630 MS4A4AQ96JQ5 239 aa10.46□□□□□ -0.73
CSMD1-209ENST00000520630 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.46□□□□□ -0.73
CSMD1-209ENST00000520630 MED23Q9ULK4 1368 aa10.46□□□□□ -0.74
CSMD1-209ENST00000520630 DNAH12Q6ZR08 3092 aa10.45□□□□□ -0.74
CSMD1-209ENST00000520630 XDHP47989 1333 aa10.45□□□□□ -0.74
CSMD1-209ENST00000520630 G3V3G9 751 aa10.45□□□□□ -0.74
CSMD1-209ENST00000520630 USP2O75604 605 aaPredicted RBP10.45□□□□□ -0.74
CSMD1-209ENST00000520630 MYCP01106 439 aaPredicted RBP10.45□□□□□ -0.74
CSMD1-209ENST00000520630 KLRK1P26718 216 aa10.45□□□□□ -0.74
CSMD1-209ENST00000520630 NF2P35240 595 aa10.45□□□□□ -0.74
CSMD1-209ENST00000520630 DCAF8Q5TAQ9 597 aa10.45□□□□□ -0.74
CSMD1-209ENST00000520630 SH3TC2Q8TF17 1288 aa10.45□□□□□ -0.74
CSMD1-209ENST00000520630 CCDC85AQ96PX6 553 aaPredicted RBP10.45□□□□□ -0.74
CSMD1-209ENST00000520630 TMEM106CQ9BVX2 250 aa10.45□□□□□ -0.74
CSMD1-209ENST00000520630 ARHGAP39Q9C0H5 1083 aa10.45□□□□□ -0.74
CSMD1-209ENST00000520630 MYH13Q9UKX3 1938 aa10.45□□□□□ -0.74
CSMD1-209ENST00000520630 PHIPQ8WWQ0 1821 aa10.44□□□□□ -0.74
CSMD1-209ENST00000520630 ATP2B4P23634 1241 aa10.44□□□□□ -0.74
CSMD1-209ENST00000520630 CTGFP29279 349 aa10.44□□□□□ -0.74
CSMD1-209ENST00000520630 MTFR1Q15390 333 aa10.44□□□□□ -0.74
CSMD1-209ENST00000520630 NBPF12Q5TAG4 269 aaPredicted RBP10.44□□□□□ -0.74
CSMD1-209ENST00000520630 STRIP1Q5VSL9 837 aa10.44□□□□□ -0.74
CSMD1-209ENST00000520630 APOBEC3FQ8IUX4 373 aaKnown RBP10.44□□□□□ -0.74
CSMD1-209ENST00000520630 ZBTB38Q8NAP3 1195 aaPredicted RBP10.44□□□□□ -0.74
CSMD1-209ENST00000520630 CNKSR2Q8WXI2 1034 aa10.44□□□□□ -0.74
CSMD1-209ENST00000520630 LRCH3Q96II8 777 aa10.44□□□□□ -0.74
CSMD1-209ENST00000520630 DEFB129Q9H1M3 183 aa10.44□□□□□ -0.74
CSMD1-209ENST00000520630 IRS2Q9Y4H2 1338 aa10.43□□□□□ -0.74
CSMD1-209ENST00000520630 SLC9C1Q4G0N8 1177 aa10.43□□□□□ -0.74
CSMD1-209ENST00000520630 KIAA0825Q8IV33 1275 aa10.43□□□□□ -0.74
CSMD1-209ENST00000520630 CERS5Q8N5B7 392 aa10.43□□□□□ -0.74
CSMD1-209ENST00000520630 BABAM1Q9NWV8 329 aa10.43□□□□□ -0.74
CSMD1-209ENST00000520630 MINPP1Q9UNW1 487 aa10.43□□□□□ -0.74
CSMD1-209ENST00000520630 PLXNB2O15031 1838 aa10.42□□□□□ -0.74
CSMD1-209ENST00000520630 MUC3AQ02505 3323 aa10.42□□□□□ -0.74
CSMD1-209ENST00000520630 CHL1O00533 1208 aa10.42□□□□□ -0.74
CSMD1-209ENST00000520630 MNX1P50219 401 aaPredicted RBP10.42□□□□□ -0.74
CSMD1-209ENST00000520630 SLC4A8Q2Y0W8 1093 aa10.42□□□□□ -0.74
CSMD1-209ENST00000520630 CDAN1Q8IWY9 1227 aa10.42□□□□□ -0.74
CSMD1-209ENST00000520630 BRI3BPQ8WY22 251 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms