RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 AKAP2Q9Y2D5 859 aa6.97□□□□□ -1.29
CTNNA1-220ENST00000520260 PPIP5K2O43314 1243 aa6.96□□□□□ -1.3
CTNNA1-220ENST00000520260 CSF1RP07333 972 aa6.96□□□□□ -1.3
CTNNA1-220ENST00000520260 IFIT1P09914 478 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-220ENST00000520260 IARSP41252 1262 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-220ENST00000520260 MVPQ14764 893 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-220ENST00000520260 WASHC4Q2M389 1173 aa6.96□□□□□ -1.3
CTNNA1-220ENST00000520260 LMBR1LQ6UX01 489 aa6.96□□□□□ -1.3
CTNNA1-220ENST00000520260 CCDC24Q8N4L8 307 aa6.96□□□□□ -1.3
CTNNA1-220ENST00000520260 GPBP1L1Q9HC44 474 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-220ENST00000520260 PODXL2Q9NZ53 605 aa6.96□□□□□ -1.3
CTNNA1-220ENST00000520260 MYO3BQ8WXR4 1341 aa6.96□□□□□ -1.3
CTNNA1-220ENST00000520260 MYH3P11055 1940 aa6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 N4BP2Q86UW6 1770 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 SRGAP3O43295 1099 aa6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 FRAT2O75474 233 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 BCAR3O75815 825 aa6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 CIAO1O76071 339 aa6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 UFL1O94874 794 aa6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 SLC5A1P13866 664 aa6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 KCNA3P22001 575 aa6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 IL15P40933 162 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 G3BP1Q13283 466 aaKnown RBP eCLIP6.95□□□□□ -1.34e-7■■□□□ 12.6
CTNNA1-220ENST00000520260 FAM161AQ3B820 660 aa6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 RABL6Q3YEC7 729 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 METTL24Q5JXM2 366 aa6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 C9orf131Q5VYM1 1079 aa6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 IFNL1Q8IU54 200 aa6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 RPAP2Q8IXW5 612 aaPredicted RBP6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 CLUAP1Q96AJ1 413 aa6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 BICC1Q9H694 974 aaKnown RBP6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 GREM2Q9H772 168 aa6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 CEP126Q9P2H0 1117 aa6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 MED23Q9ULK4 1368 aa6.95□□□□□ -1.3
CTNNA1-220ENST00000520260 IGSF3O75054 1194 aa6.94□□□□□ -1.3
CTNNA1-220ENST00000520260 YBX3P16989 372 aaKnown RBP eCLIP6.94□□□□□ -1.3
CTNNA1-220ENST00000520260 RPS12P25398 132 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-220ENST00000520260 RRP1P56182 461 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-220ENST00000520260 KIAA2012Q0VF49 1180 aa6.94□□□□□ -1.3
CTNNA1-220ENST00000520260 PUM3Q15397 648 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-220ENST00000520260 GORABQ5T7V8 394 aa6.94□□□□□ -1.3
CTNNA1-220ENST00000520260 PODNQ7Z5L7 613 aa6.94□□□□□ -1.3
CTNNA1-220ENST00000520260 PNMA8AQ86V59 439 aaPredicted RBP6.94□□□□□ -1.3
CTNNA1-220ENST00000520260 GPC2Q8N158 579 aa6.94□□□□□ -1.3
CTNNA1-220ENST00000520260 SYNE4Q8N205 404 aa6.94□□□□□ -1.3
CTNNA1-220ENST00000520260 OGFOD1Q8N543 542 aa6.94□□□□□ -1.3
CTNNA1-220ENST00000520260 ZGPATQ8N5A5 531 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-220ENST00000520260 GPATCH3Q96I76 525 aa6.94□□□□□ -1.3
CTNNA1-220ENST00000520260 RTFDC1Q9BY42 306 aaPredicted RBP6.94□□□□□ -1.3
CTNNA1-220ENST00000520260 COA1Q9GZY4 146 aa6.94□□□□□ -1.3
CTNNA1-220ENST00000520260 USP44Q9H0E7 712 aa6.94□□□□□ -1.3
CTNNA1-220ENST00000520260 ANKRD31Q8N7Z5 1873 aa6.94□□□□□ -1.3
CTNNA1-220ENST00000520260 CHD4Q14839 1912 aa6.93□□□□□ -1.3
CTNNA1-220ENST00000520260 COL11A2P13942 1736 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-220ENST00000520260 NBPF7P0C2Y1 421 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-220ENST00000520260 MTX1Q13505 466 aa6.93□□□□□ -1.3
CTNNA1-220ENST00000520260 UBE4AQ14139 1066 aa6.93□□□□□ -1.3
CTNNA1-220ENST00000520260 SLF2Q8IX21 1173 aa6.93□□□□□ -1.3
CTNNA1-220ENST00000520260 TMEM57Q8N5G2 664 aa6.93□□□□□ -1.3
CTNNA1-220ENST00000520260 TBC1D22AQ8WUA7 517 aa6.93□□□□□ -1.3
CTNNA1-220ENST00000520260 SUCLG2Q96I99 432 aa6.93□□□□□ -1.3
CTNNA1-220ENST00000520260 CCDC85AQ96PX6 553 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-220ENST00000520260 HDAC9Q9UKV0 1011 aa6.93□□□□□ -1.3
CTNNA1-220ENST00000520260 WWC3Q9ULE0 1092 aa6.93□□□□□ -1.3
CTNNA1-220ENST00000520260 ZNRF3Q9ULT6 936 aa6.93□□□□□ -1.3
CTNNA1-220ENST00000520260 LRRFIP2Q9Y608 721 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-220ENST00000520260 BRCA1P38398 1863 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-220ENST00000520260 ZNF804BA4D1E1 1349 aa6.93□□□□□ -1.3
CTNNA1-220ENST00000520260 MAST3O60307 1309 aa6.93□□□□□ -1.3
CTNNA1-220ENST00000520260 TNRC6CQ9HCJ0 1690 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-220ENST00000520260 DDX60Q8IY21 1712 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-220ENST00000520260 H7C1D1 291 aa6.92□□□□□ -1.3
CTNNA1-220ENST00000520260 EYA2O00167 538 aa6.92□□□□□ -1.3
CTNNA1-220ENST00000520260 SEMA3EO15041 775 aa6.92□□□□□ -1.3
CTNNA1-220ENST00000520260 RAB11FIP3O75154 756 aa6.92□□□□□ -1.3
CTNNA1-220ENST00000520260 VEGFAP15692 232 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-220ENST00000520260 CASP7P55210 303 aa6.92□□□□□ -1.3
CTNNA1-220ENST00000520260 FOXO4P98177 505 aa6.92□□□□□ -1.3
CTNNA1-220ENST00000520260 CHRNDQ07001 517 aa6.92□□□□□ -1.3
CTNNA1-220ENST00000520260 LRRFIP1Q32MZ4 808 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-220ENST00000520260 CIAPIN1Q6FI81 312 aa6.92□□□□□ -1.3
CTNNA1-220ENST00000520260 TMED8Q6PL24 325 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-220ENST00000520260 TBC1D16Q8TBP0 767 aa6.92□□□□□ -1.3
CTNNA1-220ENST00000520260 C7orf43Q8WVR3 580 aa6.92□□□□□ -1.3
CTNNA1-220ENST00000520260 LPIN2Q92539 896 aa6.92□□□□□ -1.3
CTNNA1-220ENST00000520260 CELF1Q92879 486 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-220ENST00000520260 DDRGK1Q96HY6 314 aa6.92□□□□□ -1.3
CTNNA1-220ENST00000520260 COPRSQ9NQ92 184 aa6.92□□□□□ -1.3
CTNNA1-220ENST00000520260 ZNF277Q9NRM2 450 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-220ENST00000520260 MINPP1Q9UNW1 487 aa6.92□□□□□ -1.3
CTNNA1-220ENST00000520260 KIAA1551Q9HCM1 1747 aa6.92□□□□□ -1.3
CTNNA1-220ENST00000520260 SRCAPQ6ZRS2 3230 aa6.91□□□□□ -1.3
CTNNA1-220ENST00000520260 GLTPD2A6NH11 291 aa6.91□□□□□ -1.3
CTNNA1-220ENST00000520260 NFKBIEO00221 500 aa6.91□□□□□ -1.3
CTNNA1-220ENST00000520260 MYO1BO43795 1136 aa6.91□□□□□ -1.3
CTNNA1-220ENST00000520260 PDE8BO95263 885 aa6.91□□□□□ -1.3
CTNNA1-220ENST00000520260 PDE4AP27815 886 aa6.91□□□□□ -1.3
CTNNA1-220ENST00000520260 RASSF7Q02833 373 aa6.91□□□□□ -1.3
CTNNA1-220ENST00000520260 AOC3Q16853 763 aa6.91□□□□□ -1.3
CTNNA1-220ENST00000520260 CCDC158Q5M9N0 1113 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms