RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 ANGEL2Q5VTE6 544 aaKnown RBP9.51□□□□□ -0.89
CTNNA1-216ENST00000519489 SPRYD7Q5W111 196 aa9.51□□□□□ -0.89
CTNNA1-216ENST00000519489 TPTE2Q6XPS3 522 aa9.51□□□□□ -0.89
CTNNA1-216ENST00000519489 ZNF496Q96IT1 587 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-216ENST00000519489 CARD14Q9BXL6 1004 aa9.51□□□□□ -0.89
CTNNA1-216ENST00000519489 RTL9Q8NET4 1388 aa9.5□□□□□ -0.89
CTNNA1-216ENST00000519489 RIC1Q4ADV7 1423 aa9.5□□□□□ -0.89
CTNNA1-216ENST00000519489 RNMTO43148 476 aaKnown RBP9.5□□□□□ -0.89
CTNNA1-216ENST00000519489 HLFQ16534 295 aa9.5□□□□□ -0.89
CTNNA1-216ENST00000519489 KIF4BQ2VIQ3 1234 aa9.5□□□□□ -0.89
CTNNA1-216ENST00000519489 C1orf141Q5JVX7 400 aa9.5□□□□□ -0.89
CTNNA1-216ENST00000519489 TESK2Q96S53 571 aa9.5□□□□□ -0.89
CTNNA1-216ENST00000519489 VPS33BQ9H267 617 aa9.5□□□□□ -0.89
CTNNA1-216ENST00000519489 FZD1Q9UP38 647 aa9.5□□□□□ -0.89
CTNNA1-216ENST00000519489 NIP7Q9Y221 180 aaKnown RBP eCLIP9.5□□□□□ -0.89
CTNNA1-216ENST00000519489 BDP1A6H8Y1 2624 aa9.5□□□□□ -0.89
CTNNA1-216ENST00000519489 SP3Q02447 781 aa9.49□□□□□ -0.89
CTNNA1-216ENST00000519489 SCARF1Q14162 830 aa9.49□□□□□ -0.89
CTNNA1-216ENST00000519489 ARSIQ5FYB1 569 aa9.49□□□□□ -0.89
CTNNA1-216ENST00000519489 ALYREFQ86V81 257 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-216ENST00000519489 ZNF687Q8N1G0 1237 aa9.49□□□□□ -0.89
CTNNA1-216ENST00000519489 TMC2Q8TDI7 906 aa9.49□□□□□ -0.89
CTNNA1-216ENST00000519489 PTPN18Q99952 460 aa9.49□□□□□ -0.89
CTNNA1-216ENST00000519489 HTATIP2Q9BUP3 242 aa9.49□□□□□ -0.89
CTNNA1-216ENST00000519489 ATP6V0A2Q9Y487 856 aa9.49□□□□□ -0.89
CTNNA1-216ENST00000519489 KIF7Q2M1P5 1343 aa9.49□□□□□ -0.89
CTNNA1-216ENST00000519489 IRS2Q9Y4H2 1338 aa9.49□□□□□ -0.89
CTNNA1-216ENST00000519489 TNNT2P45379 298 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-216ENST00000519489 GRIPAP1Q4V328 841 aa9.48□□□□□ -0.89
CTNNA1-216ENST00000519489 CLEC4GQ6UXB4 293 aa9.48□□□□□ -0.89
CTNNA1-216ENST00000519489 NBPF11Q86T75 865 aa9.48□□□□□ -0.89
CTNNA1-216ENST00000519489 MAFAQ8NHW3 353 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-216ENST00000519489 CRAMP1Q96RY5 1269 aa9.48□□□□□ -0.89
CTNNA1-216ENST00000519489 ARHGAP39Q9C0H5 1083 aa9.48□□□□□ -0.89
CTNNA1-216ENST00000519489 KDM3BQ7LBC6 1761 aa9.47□□□□□ -0.89
CTNNA1-216ENST00000519489 ALDH1A1P00352 501 aa9.47□□□□□ -0.89
CTNNA1-216ENST00000519489 LDLRAD1Q5T700 205 aa9.47□□□□□ -0.89
CTNNA1-216ENST00000519489 CDX2Q99626 313 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-216ENST00000519489 ZMYND8Q9ULU4 1186 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-216ENST00000519489 HEG1Q9ULI3 1381 aa9.47□□□□□ -0.89
CTNNA1-216ENST00000519489 DUOX1Q9NRD9 1551 aa9.46□□□□□ -0.89
CTNNA1-216ENST00000519489 EVI5O60447 810 aa9.46□□□□□ -0.9
CTNNA1-216ENST00000519489 GJA5P36382 358 aa9.46□□□□□ -0.9
CTNNA1-216ENST00000519489 GJA8P48165 433 aa9.46□□□□□ -0.9
CTNNA1-216ENST00000519489 SYMPKQ92797 1274 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-216ENST00000519489 DBNDD1Q9H9R9 158 aa9.46□□□□□ -0.9
CTNNA1-216ENST00000519489 ZNF316A6NFI3 1004 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-216ENST00000519489 KCNQ3O43525 872 aa9.45□□□□□ -0.9
CTNNA1-216ENST00000519489 MAGEA10P43363 369 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-216ENST00000519489 PRKG1Q13976 671 aa9.45□□□□□ -0.9
CTNNA1-216ENST00000519489 FAM109BQ6ICB4 259 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-216ENST00000519489 TDHQ8IZJ6 230 aa9.45□□□□□ -0.9
CTNNA1-216ENST00000519489 USP38Q8NB14 1042 aa9.45□□□□□ -0.9
CTNNA1-216ENST00000519489 RPGRQ92834 1020 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-216ENST00000519489 CLMNQ96JQ2 1002 aa9.45□□□□□ -0.9
CTNNA1-216ENST00000519489 RYDENQ9NUL5 291 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-216ENST00000519489 USP16Q9Y5T5 823 aa9.45□□□□□ -0.9
CTNNA1-216ENST00000519489 UBR2Q8IWV8 1755 aa9.45□□□□□ -0.9
CTNNA1-216ENST00000519489 MANSC4A6NHS7 340 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-216ENST00000519489 NBPF26B4DH59 902 aa9.44□□□□□ -0.9
CTNNA1-216ENST00000519489 FARP2O94887 1054 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-216ENST00000519489 CTGFP29279 349 aa9.44□□□□□ -0.9
CTNNA1-216ENST00000519489 ZNF280AP59817 542 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-216ENST00000519489 NBPF10Q6P3W6 841 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-216ENST00000519489 DPP8Q6V1X1 898 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-216ENST00000519489 RBM17Q96I25 401 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-216ENST00000519489 MUC6Q6W4X9 2439 aa9.44□□□□□ -0.9
CTNNA1-216ENST00000519489 ZSWIM8A7E2V4 1837 aa9.43□□□□□ -0.9
CTNNA1-216ENST00000519489 SSC5DA1L4H1 1573 aa9.43□□□□□ -0.9
CTNNA1-216ENST00000519489 ABCC4O15439 1325 aa9.43□□□□□ -0.9
CTNNA1-216ENST00000519489 GJB1P08034 283 aa9.43□□□□□ -0.9
CTNNA1-216ENST00000519489 SYN1P17600 705 aa9.43□□□□□ -0.9
CTNNA1-216ENST00000519489 TTLL12Q14166 644 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-216ENST00000519489 TJAP1Q5JTD0 557 aa9.43□□□□□ -0.9
CTNNA1-216ENST00000519489 SUPT20HQ8NEM7 779 aa9.43□□□□□ -0.9
CTNNA1-216ENST00000519489 KHSRPQ92945 711 aaKnown RBP eCLIP9.43□□□□□ -0.9
CTNNA1-216ENST00000519489 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-216ENST00000519489 UBN2Q6ZU65 1347 aa9.42□□□□□ -0.9
CTNNA1-216ENST00000519489 CCL5P13501 91 aa9.42□□□□□ -0.9
CTNNA1-216ENST00000519489 RPS12P25398 132 aaKnown RBP9.42□□□□□ -0.9
CTNNA1-216ENST00000519489 MYLIPQ8WY64 445 aa9.42□□□□□ -0.9
CTNNA1-216ENST00000519489 ARIH1Q9Y4X5 557 aaPredicted RBP9.42□□□□□ -0.9
CTNNA1-216ENST00000519489 PCDHGA4Q9Y5G9 962 aa9.42□□□□□ -0.9
CTNNA1-216ENST00000519489 COL2A1P02458 1487 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-216ENST00000519489 VIL1P09327 827 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-216ENST00000519489 GTF2E1P29083 439 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-216ENST00000519489 INHBEP58166 350 aa9.41□□□□□ -0.9
CTNNA1-216ENST00000519489 FOXK1P85037 733 aa9.41□□□□□ -0.9
CTNNA1-216ENST00000519489 NBPF9Q3BBW0 867 aa9.41□□□□□ -0.9
CTNNA1-216ENST00000519489 SULT6B1Q6IMI4 303 aa9.41□□□□□ -0.9
CTNNA1-216ENST00000519489 ZNF790Q6PG37 636 aa9.41□□□□□ -0.9
CTNNA1-216ENST00000519489 SP8Q8IXZ3 490 aa9.41□□□□□ -0.9
CTNNA1-216ENST00000519489 C7orf61Q8IZ16 206 aa9.41□□□□□ -0.9
CTNNA1-216ENST00000519489 U2AF1L4Q8WU68 220 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-216ENST00000519489 WNK4Q96J92 1243 aa9.41□□□□□ -0.9
CTNNA1-216ENST00000519489 CARD11Q9BXL7 1154 aa9.41□□□□□ -0.9
CTNNA1-216ENST00000519489 GPHNQ9NQX3 736 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-216ENST00000519489 NCOR1O75376 2440 aa9.4□□□□□ -0.9
CTNNA1-216ENST00000519489 NUDT7P0C024 238 aa9.4□□□□□ -0.9
CTNNA1-216ENST00000519489 TCIRG1Q13488 830 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms