RNA–Protein interactions for RNA: ENST00000519339.5

TNIP1-206, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 1 (best)

Gene TNIP1, Length 1,815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-206ENST00000519339 SEC62Q99442 399 aaKnown RBP18.28■□□□□ 0.52
TNIP1-206ENST00000519339 DDX49Q9Y6V7 483 aaKnown RBP18.28■□□□□ 0.52
TNIP1-206ENST00000519339 CYP21A2P08686 494 aa18.27■□□□□ 0.52
TNIP1-206ENST00000519339 CPA1P15085 419 aa18.27■□□□□ 0.52
TNIP1-206ENST00000519339 MAST3O60307 1309 aa18.27■□□□□ 0.51
TNIP1-206ENST00000519339 HSPD1P10809 573 aaKnown RBP18.26■□□□□ 0.51
TNIP1-206ENST00000519339 ARID4AP29374 1257 aaPredicted RBP18.26■□□□□ 0.51
TNIP1-206ENST00000519339 FKBP4Q02790 459 aaKnown RBP eCLIP18.26■□□□□ 0.51
TNIP1-206ENST00000519339 ME3Q16798 604 aa18.26■□□□□ 0.51
TNIP1-206ENST00000519339 APPBP2Q92624 585 aa18.26■□□□□ 0.51
TNIP1-206ENST00000519339 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.26■□□□□ 0.516e-7■□□□□ 10.5
TNIP1-206ENST00000519339 NIP7Q9Y221 180 aaKnown RBP eCLIP18.26■□□□□ 0.51
TNIP1-206ENST00000519339 ATP6V1DQ9Y5K8 247 aa18.26■□□□□ 0.51
TNIP1-206ENST00000519339 TRIM37O94972 964 aa18.26■□□□□ 0.51
TNIP1-206ENST00000519339 KCNQ4P56696 695 aa18.26■□□□□ 0.51
TNIP1-206ENST00000519339 CCDC129Q6ZRS4 1044 aa18.26■□□□□ 0.51
TNIP1-206ENST00000519339 BCL11BQ9C0K0 894 aaPredicted RBP18.26■□□□□ 0.51
TNIP1-206ENST00000519339 CTNNA3Q9UI47 895 aa18.26■□□□□ 0.51
TNIP1-206ENST00000519339 TPCN1Q9ULQ1 816 aa18.26■□□□□ 0.51
TNIP1-206ENST00000519339 LY75O60449 1722 aa18.25■□□□□ 0.51
TNIP1-206ENST00000519339 ARAP2Q8WZ64 1704 aa18.25■□□□□ 0.51
TNIP1-206ENST00000519339 STX6O43752 255 aa18.25■□□□□ 0.51
TNIP1-206ENST00000519339 DDX60Q8IY21 1712 aaKnown RBP18.24■□□□□ 0.51
TNIP1-206ENST00000519339 LARGE1O95461 756 aa18.24■□□□□ 0.51
TNIP1-206ENST00000519339 MBD3O95983 291 aa18.24■□□□□ 0.51
TNIP1-206ENST00000519339 ZSCAN22P10073 491 aaPredicted RBP18.24■□□□□ 0.51
TNIP1-206ENST00000519339 ZAP70P43403 619 aa18.24■□□□□ 0.51
TNIP1-206ENST00000519339 MRE11P49959 708 aa18.24■□□□□ 0.51
TNIP1-206ENST00000519339 TOB2Q14106 344 aaPredicted RBP18.24■□□□□ 0.51
TNIP1-206ENST00000519339 FBXL16Q8N461 479 aa18.24■□□□□ 0.51
TNIP1-206ENST00000519339 MPHOSPH8Q99549 860 aa18.24■□□□□ 0.51
TNIP1-206ENST00000519339 GZF1Q9H116 711 aaPredicted RBP18.24■□□□□ 0.51
TNIP1-206ENST00000519339 AKAP11Q9UKA4 1901 aa18.24■□□□□ 0.51
TNIP1-206ENST00000519339 PDCP20941 246 aa18.23■□□□□ 0.51
TNIP1-206ENST00000519339 SYT1P21579 422 aa18.23■□□□□ 0.51
TNIP1-206ENST00000519339 CCDC83Q8IWF9 413 aa18.23■□□□□ 0.51
TNIP1-206ENST00000519339 LINC00116Q8NCU8 138 aa18.23■□□□□ 0.51
TNIP1-206ENST00000519339 OSBP2Q969R2 916 aa18.23■□□□□ 0.51
TNIP1-206ENST00000519339 CHMP4CQ96CF2 233 aa18.23■□□□□ 0.51
TNIP1-206ENST00000519339 AGXT2Q9BYV1 514 aa18.23■□□□□ 0.51
TNIP1-206ENST00000519339 CHGBP05060 677 aa18.23■□□□□ 0.51
TNIP1-206ENST00000519339 SLC5A1P13866 664 aa18.23■□□□□ 0.51
TNIP1-206ENST00000519339 IGHMBP2P38935 993 aaKnown RBP18.23■□□□□ 0.51
TNIP1-206ENST00000519339 MCAMP43121 646 aa18.23■□□□□ 0.51
TNIP1-206ENST00000519339 SCARF1Q14162 830 aa18.23■□□□□ 0.51
TNIP1-206ENST00000519339 CCDC102BQ68D86 513 aa18.23■□□□□ 0.51
TNIP1-206ENST00000519339 DHX32Q7L7V1 743 aaKnown RBP18.23■□□□□ 0.51
TNIP1-206ENST00000519339 TMEM87AQ8NBN3 555 aa18.23■□□□□ 0.51
TNIP1-206ENST00000519339 PRPF40AO75400 957 aaKnown RBP18.22■□□□□ 0.51
TNIP1-206ENST00000519339 HCLS1P14317 486 aaPredicted RBP18.22■□□□□ 0.51
TNIP1-206ENST00000519339 GJB2P29033 226 aa18.22■□□□□ 0.51
TNIP1-206ENST00000519339 UBE3CQ15386 1083 aa18.22■□□□□ 0.51
TNIP1-206ENST00000519339 SF3B3Q15393 1217 aaKnown RBP18.22■□□□□ 0.51
TNIP1-206ENST00000519339 TAF6LQ9Y6J9 622 aa18.22■□□□□ 0.51
TNIP1-206ENST00000519339 RPS6KA4O75676 772 aa18.21■□□□□ 0.51
TNIP1-206ENST00000519339 ST3GAL1Q11201 340 aa18.21■□□□□ 0.51
TNIP1-206ENST00000519339 CDC5LQ99459 802 aaKnown RBP18.21■□□□□ 0.51
TNIP1-206ENST00000519339 MYH7P12883 1935 aa18.21■□□□□ 0.51
TNIP1-206ENST00000519339 ADD2P35612 726 aa18.21■□□□□ 0.51
TNIP1-206ENST00000519339 ZNF445P59923 1031 aa18.21■□□□□ 0.51
TNIP1-206ENST00000519339 SLC10A5Q5PT55 438 aa18.21■□□□□ 0.51
TNIP1-206ENST00000519339 SCN7AQ01118 1682 aa18.2■□□□□ 0.5
TNIP1-206ENST00000519339 M0R2C6 588 aa18.2■□□□□ 0.5
TNIP1-206ENST00000519339 F13A1P00488 732 aa18.2■□□□□ 0.5
TNIP1-206ENST00000519339 KLHL34Q8N239 644 aa18.2■□□□□ 0.5
TNIP1-206ENST00000519339 EXOSC10Q01780 885 aaKnown RBP18.19■□□□□ 0.5
TNIP1-206ENST00000519339 WASHC4Q2M389 1173 aa18.19■□□□□ 0.5
TNIP1-206ENST00000519339 NARFQ9UHQ1 456 aa18.19■□□□□ 0.5
TNIP1-206ENST00000519339 IMMTQ16891 758 aaKnown RBP18.19■□□□□ 0.5
TNIP1-206ENST00000519339 CSPP1Q1MSJ5 1256 aa18.19■□□□□ 0.5
TNIP1-206ENST00000519339 STOX1Q6ZVD7 989 aa18.19■□□□□ 0.5
TNIP1-206ENST00000519339 GTF3C6Q969F1 213 aa18.19■□□□□ 0.5
TNIP1-206ENST00000519339 LARP6Q9BRS8 491 aaKnown RBP18.19■□□□□ 0.5
TNIP1-206ENST00000519339 LLPHQ9BRT6 129 aaKnown RBP18.19■□□□□ 0.5
TNIP1-206ENST00000519339 NYXQ9GZU5 481 aa18.19■□□□□ 0.5
TNIP1-206ENST00000519339 MTMR6Q9Y217 621 aa18.19■□□□□ 0.5
TNIP1-206ENST00000519339 TAF1LQ8IZX4 1826 aa18.18■□□□□ 0.5
TNIP1-206ENST00000519339 E7EWF7 191 aa18.18■□□□□ 0.5
TNIP1-206ENST00000519339 Q6ZUG5 572 aa18.18■□□□□ 0.5
TNIP1-206ENST00000519339 TNS1Q9HBL0 1735 aaKnown RBP18.18■□□□□ 0.5
TNIP1-206ENST00000519339 PHKA1P46020 1223 aa18.17■□□□□ 0.5
TNIP1-206ENST00000519339 WDR19Q8NEZ3 1342 aa18.17■□□□□ 0.5
TNIP1-206ENST00000519339 SEC31BQ9NQW1 1179 aa18.17■□□□□ 0.5
TNIP1-206ENST00000519339 LRRC4BQ9NT99 713 aa18.17■□□□□ 0.5
TNIP1-206ENST00000519339 GPAA1O43292 621 aa18.16■□□□□ 0.5
TNIP1-206ENST00000519339 XRCC6P12956 609 aaKnown RBP eCLIP18.16■□□□□ 0.5
TNIP1-206ENST00000519339 EVCP57679 992 aa18.16■□□□□ 0.5
TNIP1-206ENST00000519339 COL9A3Q14050 684 aaPredicted RBP18.16■□□□□ 0.5
TNIP1-206ENST00000519339 SLFNL1Q499Z3 407 aa18.16■□□□□ 0.5
TNIP1-206ENST00000519339 GPT2Q8TD30 523 aa18.16■□□□□ 0.5
TNIP1-206ENST00000519339 PUS7LQ9H0K6 701 aaKnown RBP18.16■□□□□ 0.5
TNIP1-206ENST00000519339 GRPEL1Q9HAV7 217 aa18.16■□□□□ 0.5
TNIP1-206ENST00000519339 ZMYM6O95789 1325 aa18.16■□□□□ 0.5
TNIP1-206ENST00000519339 FOXP2O15409 715 aa18.16■□□□□ 0.5
TNIP1-206ENST00000519339 NCLP19338 710 aaKnown RBP18.16■□□□□ 0.5
TNIP1-206ENST00000519339 SLC9C2Q5TAH2 1124 aa18.16■□□□□ 0.5
TNIP1-206ENST00000519339 PROM2Q8N271 834 aa18.16■□□□□ 0.5
TNIP1-206ENST00000519339 NECAB1Q8N987 351 aa18.16■□□□□ 0.5
TNIP1-206ENST00000519339 SPATA5Q8NB90 893 aa18.16■□□□□ 0.5
TNIP1-206ENST00000519339 BSDC1Q9NW68 430 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms