RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 UBE2Q2LH0YL09 131 aa11.28□□□□□ -0.6
TRIM35-202ENST00000519219 USP17L8P0C7I0 530 aa11.28□□□□□ -0.6
TRIM35-202ENST00000519219 ATP2B4P23634 1241 aa11.28□□□□□ -0.6
TRIM35-202ENST00000519219 USP17L1Q7RTZ2 530 aa11.28□□□□□ -0.6
TRIM35-202ENST00000519219 PI4KAP1Q8N8J0 262 aa11.28□□□□□ -0.6
TRIM35-202ENST00000519219 SAGE1Q9NXZ1 904 aa11.28□□□□□ -0.6
TRIM35-202ENST00000519219 MINPP1Q9UNW1 487 aa11.28□□□□□ -0.6
TRIM35-202ENST00000519219 MED23Q9ULK4 1368 aa11.28□□□□□ -0.6
TRIM35-202ENST00000519219 SASH1O94885 1247 aa11.27□□□□□ -0.61
TRIM35-202ENST00000519219 DACT2Q5SW24 774 aa11.27□□□□□ -0.61
TRIM35-202ENST00000519219 CCDC30Q5VVM6 783 aa11.27□□□□□ -0.61
TRIM35-202ENST00000519219 FBXW7Q969H0 707 aa11.27□□□□□ -0.61
TRIM35-202ENST00000519219 ECM29Q5VYK3 1845 aa11.26□□□□□ -0.61
TRIM35-202ENST00000519219 NEURL1BA8MQ27 555 aa11.26□□□□□ -0.61
TRIM35-202ENST00000519219 CCT4P50991 539 aaKnown RBP11.26□□□□□ -0.61
TRIM35-202ENST00000519219 MKRN3Q13064 507 aaKnown RBP11.26□□□□□ -0.61
TRIM35-202ENST00000519219 KSR2Q6VAB6 950 aa11.26□□□□□ -0.61
TRIM35-202ENST00000519219 UBE3BQ7Z3V4 1068 aa11.26□□□□□ -0.61
TRIM35-202ENST00000519219 BSDC1Q9NW68 430 aaPredicted RBP11.26□□□□□ -0.61
TRIM35-202ENST00000519219 FZD1Q9UP38 647 aa11.26□□□□□ -0.61
TRIM35-202ENST00000519219 CACNA1FO60840 1977 aa11.26□□□□□ -0.61
TRIM35-202ENST00000519219 PITPNM2Q9BZ72 1349 aa11.26□□□□□ -0.61
TRIM35-202ENST00000519219 SNAP23O00161 211 aa11.25□□□□□ -0.61
TRIM35-202ENST00000519219 WNT10BO00744 389 aa11.25□□□□□ -0.61
TRIM35-202ENST00000519219 TBC1D8O95759 1140 aa11.25□□□□□ -0.61
TRIM35-202ENST00000519219 DDX58O95786 925 aaKnown RBP11.25□□□□□ -0.61
TRIM35-202ENST00000519219 HSP90B1P14625 803 aaKnown RBP11.25□□□□□ -0.61
TRIM35-202ENST00000519219 ZEB1P37275 1124 aaPredicted RBP11.25□□□□□ -0.61
TRIM35-202ENST00000519219 PODNQ7Z5L7 613 aa11.25□□□□□ -0.61
TRIM35-202ENST00000519219 CDC5LQ99459 802 aaKnown RBP11.25□□□□□ -0.61
TRIM35-202ENST00000519219 PCDHAC2Q9Y5I4 1007 aa11.25□□□□□ -0.61
TRIM35-202ENST00000519219 H7C1W4 665 aa11.24□□□□□ -0.61
TRIM35-202ENST00000519219 CASP7P55210 303 aa11.24□□□□□ -0.61
TRIM35-202ENST00000519219 CALD1Q05682 793 aaKnown RBP11.24□□□□□ -0.61
TRIM35-202ENST00000519219 PRKG1Q13976 671 aa11.24□□□□□ -0.61
TRIM35-202ENST00000519219 R3HDMLQ9H3Y0 253 aa11.24□□□□□ -0.61
TRIM35-202ENST00000519219 AOX1Q06278 1338 aa11.24□□□□□ -0.61
TRIM35-202ENST00000519219 ITGA6P23229 1130 aa11.23□□□□□ -0.61
TRIM35-202ENST00000519219 FKBP1BP68106 108 aa11.23□□□□□ -0.61
TRIM35-202ENST00000519219 PTPN12Q05209 780 aaKnown RBP11.23□□□□□ -0.61
TRIM35-202ENST00000519219 TTLL12Q14166 644 aaPredicted RBP11.23□□□□□ -0.61
TRIM35-202ENST00000519219 TWISTNBQ3B726 338 aaPredicted RBP11.23□□□□□ -0.61
TRIM35-202ENST00000519219 CTU1Q7Z7A3 348 aaKnown RBP11.23□□□□□ -0.61
TRIM35-202ENST00000519219 KIAA0825Q8IV33 1275 aa11.23□□□□□ -0.61
TRIM35-202ENST00000519219 ZNF296Q8WUU4 475 aaPredicted RBP11.23□□□□□ -0.61
TRIM35-202ENST00000519219 IRS2Q9Y4H2 1338 aa11.23□□□□□ -0.61
TRIM35-202ENST00000519219 SSC5DA1L4H1 1573 aa11.23□□□□□ -0.61
TRIM35-202ENST00000519219 ZNF804BA4D1E1 1349 aa11.22□□□□□ -0.61
TRIM35-202ENST00000519219 SLC4A2P04920 1241 aa11.22□□□□□ -0.61
TRIM35-202ENST00000519219 LAMB1P07942 1786 aa11.22□□□□□ -0.61
TRIM35-202ENST00000519219 GTF2IP78347 998 aa11.22□□□□□ -0.61
TRIM35-202ENST00000519219 GCKRQ14397 625 aa11.22□□□□□ -0.61
TRIM35-202ENST00000519219 STRIP1Q5VSL9 837 aa11.22□□□□□ -0.61
TRIM35-202ENST00000519219 WWC1Q8IX03 1113 aa11.22□□□□□ -0.61
TRIM35-202ENST00000519219 CERS5Q8N5B7 392 aa11.22□□□□□ -0.61
TRIM35-202ENST00000519219 ZBED3Q96IU2 234 aaPredicted RBP11.22□□□□□ -0.61
TRIM35-202ENST00000519219 COA1Q9GZY4 146 aa11.22□□□□□ -0.61
TRIM35-202ENST00000519219 OTOFQ9HC10 1997 aa11.22□□□□□ -0.61
TRIM35-202ENST00000519219 HPS5Q9UPZ3 1129 aa11.22□□□□□ -0.61
TRIM35-202ENST00000519219 IGHMBP2P38935 993 aaKnown RBP11.21□□□□□ -0.61
TRIM35-202ENST00000519219 CHRNDQ07001 517 aa11.21□□□□□ -0.61
TRIM35-202ENST00000519219 NEXNQ0ZGT2 675 aa11.21□□□□□ -0.61
TRIM35-202ENST00000519219 FLIIQ13045 1269 aa11.21□□□□□ -0.61
TRIM35-202ENST00000519219 TTLL5Q6EMB2 1281 aa11.21□□□□□ -0.61
TRIM35-202ENST00000519219 HELBQ8NG08 1087 aaPredicted RBP11.21□□□□□ -0.61
TRIM35-202ENST00000519219 PLA2G12BQ9BX93 195 aa11.21□□□□□ -0.61
TRIM35-202ENST00000519219 STK31Q9BXU1 1019 aa11.21□□□□□ -0.61
TRIM35-202ENST00000519219 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.21□□□□□ -0.61
TRIM35-202ENST00000519219 TAF5LO75529 589 aa11.2□□□□□ -0.62
TRIM35-202ENST00000519219 CSF1RP07333 972 aa11.2□□□□□ -0.62
TRIM35-202ENST00000519219 OGFOD1Q8N543 542 aa11.2□□□□□ -0.62
TRIM35-202ENST00000519219 JAG2Q9Y219 1238 aa11.2□□□□□ -0.62
TRIM35-202ENST00000519219 LEMD3Q9Y2U8 911 aa11.2□□□□□ -0.62
TRIM35-202ENST00000519219 HTTP42858 3142 aa11.2□□□□□ -0.62
TRIM35-202ENST00000519219 MYO3BQ8WXR4 1341 aa11.19□□□□□ -0.62
TRIM35-202ENST00000519219 FANCIQ9NVI1 1328 aa11.19□□□□□ -0.62
TRIM35-202ENST00000519219 F6X3S4 739 aa11.19□□□□□ -0.62
TRIM35-202ENST00000519219 GPR25O00155 361 aa11.19□□□□□ -0.62
TRIM35-202ENST00000519219 TM4SF4P48230 202 aa11.19□□□□□ -0.62
TRIM35-202ENST00000519219 FKBP5Q13451 457 aaPredicted RBP11.19□□□□□ -0.62
TRIM35-202ENST00000519219 EPHA10Q5JZY3 1008 aa11.19□□□□□ -0.62
TRIM35-202ENST00000519219 DNAAF4Q8WXU2 420 aa11.19□□□□□ -0.62
TRIM35-202ENST00000519219 CLMNQ96JQ2 1002 aa11.19□□□□□ -0.62
TRIM35-202ENST00000519219 CD209Q9NNX6 404 aa11.19□□□□□ -0.62
TRIM35-202ENST00000519219 ANGEL1Q9UNK9 670 aaKnown RBP11.19□□□□□ -0.62
TRIM35-202ENST00000519219 CLRN2A0PK11 232 aa11.18□□□□□ -0.62
TRIM35-202ENST00000519219 F8W031 263 aaPredicted RBP11.18□□□□□ -0.62
TRIM35-202ENST00000519219 FOXO4P98177 505 aa11.18□□□□□ -0.62
TRIM35-202ENST00000519219 CCDC27Q2M243 656 aa11.18□□□□□ -0.62
TRIM35-202ENST00000519219 LDLRAD1Q5T700 205 aa11.18□□□□□ -0.62
TRIM35-202ENST00000519219 SPRYD7Q5W111 196 aa11.18□□□□□ -0.62
TRIM35-202ENST00000519219 APOBEC3FQ8IUX4 373 aaKnown RBP11.18□□□□□ -0.62
TRIM35-202ENST00000519219 REM2Q8IYK8 340 aaPredicted RBP11.18□□□□□ -0.62
TRIM35-202ENST00000519219 ZNF594Q96JF6 807 aaPredicted RBP11.18□□□□□ -0.62
TRIM35-202ENST00000519219 MPHOSPH8Q99549 860 aa11.18□□□□□ -0.62
TRIM35-202ENST00000519219 ANKRD2Q9GZV1 360 aa11.18□□□□□ -0.62
TRIM35-202ENST00000519219 HDAC9Q9UKV0 1011 aa11.18□□□□□ -0.62
TRIM35-202ENST00000519219 SALL2Q9Y467 1007 aaPredicted RBP11.18□□□□□ -0.62
TRIM35-202ENST00000519219 ARAP2Q8WZ64 1704 aa11.18□□□□□ -0.62
TRIM35-202ENST00000519219 NF2P35240 595 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms