RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 TMC7Q7Z402 723 aa6.91□□□□□ -1.3
SKP1-205ENST00000519054 FMR1NBQ8N0W7 255 aaPredicted RBP6.91□□□□□ -1.3
SKP1-205ENST00000519054 POP1Q99575 1024 aaKnown RBP6.91□□□□□ -1.3
SKP1-205ENST00000519054 OSMRQ99650 979 aa6.91□□□□□ -1.3
SKP1-205ENST00000519054 ZKSCAN3Q9BRR0 538 aa6.91□□□□□ -1.3
SKP1-205ENST00000519054 C1QTNF9BB2RNN3 333 aa6.9□□□□□ -1.3
SKP1-205ENST00000519054 NFKBIEO00221 500 aa6.9□□□□□ -1.3
SKP1-205ENST00000519054 PDE2AO00408 941 aaPredicted RBP6.9□□□□□ -1.3
SKP1-205ENST00000519054 APBA3O96018 575 aa6.9□□□□□ -1.3
SKP1-205ENST00000519054 NEFLP07196 543 aa6.9□□□□□ -1.3
SKP1-205ENST00000519054 ELNP15502 786 aa6.9□□□□□ -1.3
SKP1-205ENST00000519054 CDC27P30260 824 aa6.9□□□□□ -1.3
SKP1-205ENST00000519054 TXNDC11Q6PKC3 985 aa6.9□□□□□ -1.3
SKP1-205ENST00000519054 CD163Q86VB7 1156 aa6.9□□□□□ -1.3
SKP1-205ENST00000519054 DMRTB1Q96MA1 342 aa6.9□□□□□ -1.3
SKP1-205ENST00000519054 SH2B1Q9NRF2 756 aaPredicted RBP6.9□□□□□ -1.3
SKP1-205ENST00000519054 PPME1Q9Y570 386 aa6.9□□□□□ -1.3
SKP1-205ENST00000519054 DEAF1O75398 565 aaPredicted RBP6.89□□□□□ -1.31
SKP1-205ENST00000519054 PTPRAP18433 802 aa6.89□□□□□ -1.31
SKP1-205ENST00000519054 PEAR1Q5VY43 1037 aaPredicted RBP6.89□□□□□ -1.31
SKP1-205ENST00000519054 SHISA2Q6UWI4 295 aa6.89□□□□□ -1.31
SKP1-205ENST00000519054 FBXO11Q86XK2 927 aa6.89□□□□□ -1.31
SKP1-205ENST00000519054 DTWD1Q8N5C7 304 aa6.89□□□□□ -1.31
SKP1-205ENST00000519054 FAM177BA6PVY3 158 aa6.88□□□□□ -1.31
SKP1-205ENST00000519054 LINC01387J3KSC0 135 aa6.88□□□□□ -1.31
SKP1-205ENST00000519054 EIF1AYO14602 144 aaKnown RBP6.88□□□□□ -1.31
SKP1-205ENST00000519054 CPNE3O75131 537 aaKnown RBP6.88□□□□□ -1.31
SKP1-205ENST00000519054 EPHA1P21709 976 aa6.88□□□□□ -1.31
SKP1-205ENST00000519054 GALNT12Q8IXK2 581 aa6.88□□□□□ -1.31
SKP1-205ENST00000519054 CACTIN-AS1Q8N1I8 211 aa6.88□□□□□ -1.31
SKP1-205ENST00000519054 TMEM102Q8N9M5 508 aaPredicted RBP6.88□□□□□ -1.31
SKP1-205ENST00000519054 MSTNO14793 375 aa6.87□□□□□ -1.31
SKP1-205ENST00000519054 SELPP16109 830 aa6.87□□□□□ -1.31
SKP1-205ENST00000519054 ASAP3Q8TDY4 903 aa6.87□□□□□ -1.31
SKP1-205ENST00000519054 NXPE3Q969Y0 559 aa6.87□□□□□ -1.31
SKP1-205ENST00000519054 ALKBH8Q96BT7 664 aaKnown RBP6.87□□□□□ -1.31
SKP1-205ENST00000519054 NACC1Q96RE7 527 aa6.87□□□□□ -1.31
SKP1-205ENST00000519054 SPOCK3Q9BQ16 436 aa6.87□□□□□ -1.31
SKP1-205ENST00000519054 ADAM19Q9H013 955 aa6.87□□□□□ -1.31
SKP1-205ENST00000519054 MUC3BQ9H195 1237 aa6.87□□□□□ -1.31
SKP1-205ENST00000519054 NPHS2Q9NP85 383 aa6.87□□□□□ -1.31
SKP1-205ENST00000519054 A0A1W2PP55 124 aa6.86□□□□□ -1.31
SKP1-205ENST00000519054 SETDB1Q15047 1291 aa6.86□□□□□ -1.31
SKP1-205ENST00000519054 CSRNP1Q96S65 589 aa6.86□□□□□ -1.31
SKP1-205ENST00000519054 CARD10Q9BWT7 1032 aa6.86□□□□□ -1.31
SKP1-205ENST00000519054 USP21Q9UK80 565 aa6.86□□□□□ -1.31
SKP1-205ENST00000519054 METTL12A8MUP2 240 aa6.85□□□□□ -1.31
SKP1-205ENST00000519054 TREHO43280 583 aa6.85□□□□□ -1.31
SKP1-205ENST00000519054 IGHA1P01876 353 aa6.85□□□□□ -1.31
SKP1-205ENST00000519054 PROCP04070 461 aa6.85□□□□□ -1.31
SKP1-205ENST00000519054 CABP4P57796 275 aa6.85□□□□□ -1.31
SKP1-205ENST00000519054 PLCB3Q01970 1234 aa6.85□□□□□ -1.31
SKP1-205ENST00000519054 SND1Q7KZF4 910 aaKnown RBP eCLIP6.85□□□□□ -1.312e-12■■□□□ 11.8
SKP1-205ENST00000519054 ZSCAN29Q8IWY8 852 aaPredicted RBP6.85□□□□□ -1.31
SKP1-205ENST00000519054 CCDC74AQ96AQ1 378 aa6.85□□□□□ -1.31
SKP1-205ENST00000519054 DNAJC25Q9H1X3 360 aa6.85□□□□□ -1.31
SKP1-205ENST00000519054 C9orf172C9J069 976 aa6.84□□□□□ -1.31
SKP1-205ENST00000519054 DLL1O00548 723 aa6.84□□□□□ -1.31
SKP1-205ENST00000519054 DSC3Q14574 896 aa6.84□□□□□ -1.31
SKP1-205ENST00000519054 FAM117BQ6P1L5 589 aa6.84□□□□□ -1.31
SKP1-205ENST00000519054 MAP4K3Q8IVH8 894 aa6.84□□□□□ -1.31
SKP1-205ENST00000519054 GALNT11Q8NCW6 608 aa6.84□□□□□ -1.31
SKP1-205ENST00000519054 BSNDQ8WZ55 320 aa6.84□□□□□ -1.31
SKP1-205ENST00000519054 LENG1Q96BZ8 264 aaPredicted RBP6.84□□□□□ -1.31
SKP1-205ENST00000519054 ASB16Q96NS5 453 aa6.84□□□□□ -1.31
SKP1-205ENST00000519054 BHLHE41Q9C0J9 482 aaPredicted RBP6.84□□□□□ -1.31
SKP1-205ENST00000519054 LIN7BQ9HAP6 207 aa6.84□□□□□ -1.31
SKP1-205ENST00000519054 SRA1Q9HD15 236 aaKnown RBP6.84□□□□□ -1.31
SKP1-205ENST00000519054 SOX13Q9UN79 622 aa6.84□□□□□ -1.31
SKP1-205ENST00000519054 PNMA6FA0A0J9YX94 578 aa6.83□□□□□ -1.32
SKP1-205ENST00000519054 H3BRJ5 948 aa6.83□□□□□ -1.32
SKP1-205ENST00000519054 FSCN2O14926 492 aa6.83□□□□□ -1.32
SKP1-205ENST00000519054 GATA4P43694 442 aa6.83□□□□□ -1.32
SKP1-205ENST00000519054 IGF2-ASQ6U949 168 aa6.83□□□□□ -1.32
SKP1-205ENST00000519054 EPS8L3Q8TE67 593 aaKnown RBP6.83□□□□□ -1.32
SKP1-205ENST00000519054 SLC7A3Q8WY07 619 aa6.83□□□□□ -1.32
SKP1-205ENST00000519054 TCF12Q99081 682 aa6.83□□□□□ -1.32
SKP1-205ENST00000519054 EHD4Q9H223 541 aa6.83□□□□□ -1.32
SKP1-205ENST00000519054 GADD45BO75293 160 aaPredicted RBP6.82□□□□□ -1.32
SKP1-205ENST00000519054 MAPK8P45983 427 aa6.82□□□□□ -1.32
SKP1-205ENST00000519054 NRG1Q02297 640 aaPredicted RBP6.82□□□□□ -1.32
SKP1-205ENST00000519054 ADGRE1Q14246 886 aa6.82□□□□□ -1.32
SKP1-205ENST00000519054 MBTPS1Q14703 1052 aa6.82□□□□□ -1.32
SKP1-205ENST00000519054 KIAA0319Q5VV43 1072 aa6.82□□□□□ -1.32
SKP1-205ENST00000519054 VN1R5Q7Z5H4 357 aa6.82□□□□□ -1.32
SKP1-205ENST00000519054 CCNJLQ8IV13 435 aa6.82□□□□□ -1.32
SKP1-205ENST00000519054 CD68P34810 354 aaPredicted RBP6.81□□□□□ -1.32
SKP1-205ENST00000519054 GRIA4P48058 902 aa6.81□□□□□ -1.32
SKP1-205ENST00000519054 ENOX2Q16206 610 aaKnown RBP6.81□□□□□ -1.32
SKP1-205ENST00000519054 SPRED3Q2MJR0 410 aa6.81□□□□□ -1.32
SKP1-205ENST00000519054 FOXD4L6Q3SYB3 417 aaPredicted RBP6.81□□□□□ -1.32
SKP1-205ENST00000519054 HGSNATQ68CP4 663 aa6.81□□□□□ -1.32
SKP1-205ENST00000519054 PI16Q6UXB8 463 aa6.81□□□□□ -1.32
SKP1-205ENST00000519054 FOXD4L3Q6VB84 417 aaPredicted RBP6.81□□□□□ -1.32
SKP1-205ENST00000519054 DCAF11Q8TEB1 546 aa6.81□□□□□ -1.32
SKP1-205ENST00000519054 KLHDC7BQ96G42 594 aa6.81□□□□□ -1.32
SKP1-205ENST00000519054 GZF1Q9H116 711 aaPredicted RBP6.81□□□□□ -1.32
SKP1-205ENST00000519054 SEC31BQ9NQW1 1179 aa6.81□□□□□ -1.32
SKP1-205ENST00000519054 KCNK4Q9NYG8 393 aa6.81□□□□□ -1.32
SKP1-205ENST00000519054 A0A096LPE4 126 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms