RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	C15orf52	Q6ZUT6	534 aa	Known RBP	30.32	■■■□□ 2.44
CNOT7-204	ENST00000518885	CDC37L1	Q7L3B6	337 aa		30.32	■■■□□ 2.44
CNOT7-204	ENST00000518885	ZNF804A	Q7Z570	1209 aa		30.32	■■■□□ 2.44
CNOT7-204	ENST00000518885	JMY	Q8N9B5	988 aa		30.32	■■■□□ 2.44
CNOT7-204	ENST00000518885	FBXW7	Q969H0	707 aa		30.32	■■■□□ 2.44
CNOT7-204	ENST00000518885	TAF5L	O75529	589 aa		30.31	■■■□□ 2.44
CNOT7-204	ENST00000518885	USP17L8	P0C7I0	530 aa		30.31	■■■□□ 2.44
CNOT7-204	ENST00000518885	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	30.31	■■■□□ 2.44
CNOT7-204	ENST00000518885	OGFOD1	Q8N543	542 aa		30.31	■■■□□ 2.44
CNOT7-204	ENST00000518885	HELB	Q8NG08	1087 aa	Predicted RBP	30.31	■■■□□ 2.44
CNOT7-204	ENST00000518885	WTIP	A6NIX2	430 aa	Predicted RBP	30.3	■■■□□ 2.44
CNOT7-204	ENST00000518885	KIF4B	Q2VIQ3	1234 aa		30.3	■■■□□ 2.44
CNOT7-204	ENST00000518885	SAMD7	Q7Z3H4	446 aa		30.3	■■■□□ 2.44
CNOT7-204	ENST00000518885	PSME4	Q14997	1843 aa		30.3	■■■□□ 2.44
CNOT7-204	ENST00000518885	ZBED9	Q6R2W3	1325 aa		30.29	■■■□□ 2.44
CNOT7-204	ENST00000518885	SCN9A	Q15858	1988 aa		30.29	■■■□□ 2.44
CNOT7-204	ENST00000518885	PLIN1	O60240	522 aa		30.29	■■■□□ 2.44
CNOT7-204	ENST00000518885	HIRA	P54198	1017 aa	Predicted RBP	30.29	■■■□□ 2.44
CNOT7-204	ENST00000518885	ANKRD44	Q8N8A2	993 aa		30.29	■■■□□ 2.44
CNOT7-204	ENST00000518885	DCPS	Q96C86	337 aa	Known RBP	30.29	■■■□□ 2.44
CNOT7-204	ENST00000518885	SHTN1	A0MZ66	631 aa		30.28	■■■□□ 2.44
CNOT7-204	ENST00000518885	ZNF280A	P59817	542 aa	Predicted RBP	30.28	■■■□□ 2.44
CNOT7-204	ENST00000518885	RBM26	Q5T8P6	1007 aa	Known RBP	30.28	■■■□□ 2.44
CNOT7-204	ENST00000518885	TXNRD3	Q86VQ6	643 aa		30.28	■■■□□ 2.44
CNOT7-204	ENST00000518885	ABT1	Q9ULW3	272 aa	Known RBP	30.28	■■■□□ 2.44
CNOT7-204	ENST00000518885	UBE4A	Q14139	1066 aa		30.27	■■■□□ 2.44
CNOT7-204	ENST00000518885	TTLL5	Q6EMB2	1281 aa		30.27	■■■□□ 2.44
CNOT7-204	ENST00000518885	MKRN1	Q9UHC7	482 aa	Known RBP	30.27	■■■□□ 2.44
CNOT7-204	ENST00000518885	CNTNAP1	P78357	1384 aa		30.27	■■■□□ 2.44
CNOT7-204	ENST00000518885	DACT2	Q5SW24	774 aa		30.26	■■■□□ 2.43
CNOT7-204	ENST00000518885	GML	Q99445	158 aa		30.26	■■■□□ 2.43
CNOT7-204	ENST00000518885	CD209	Q9NNX6	404 aa		30.26	■■■□□ 2.43
CNOT7-204	ENST00000518885	KLRK1	P26718	216 aa		30.25	■■■□□ 2.43
CNOT7-204	ENST00000518885	MYOZ2	Q9NPC6	264 aa		30.25	■■■□□ 2.43
CNOT7-204	ENST00000518885	HDAC9	Q9UKV0	1011 aa		30.25	■■■□□ 2.43
CNOT7-204	ENST00000518885	FRAT1	Q92837	279 aa	Predicted RBP	30.24	■■■□□ 2.43
CNOT7-204	ENST00000518885	GLIS2	Q9BZE0	524 aa	Predicted RBP	30.24	■■■□□ 2.43
CNOT7-204	ENST00000518885	TRAF5	O00463	557 aa		30.23	■■■□□ 2.43
CNOT7-204	ENST00000518885	GNAI3	P08754	354 aa		30.23	■■■□□ 2.43
CNOT7-204	ENST00000518885	DEFB115	Q30KQ5	88 aa		30.23	■■■□□ 2.43
CNOT7-204	ENST00000518885	METTL24	Q5JXM2	366 aa		30.23	■■■□□ 2.43
CNOT7-204	ENST00000518885	INTS3	Q68E01	1043 aa	Known RBP	30.23	■■■□□ 2.43
CNOT7-204	ENST00000518885	ATF7IP	Q6VMQ6	1270 aa		30.23	■■■□□ 2.43
CNOT7-204	ENST00000518885	KRT26	Q7Z3Y9	468 aa		30.23	■■■□□ 2.43
CNOT7-204	ENST00000518885	RIPOR2	Q9Y4F9	1068 aa		30.23	■■■□□ 2.43
CNOT7-204	ENST00000518885		A0A1B0GUL6	1792 aa		30.23	■■■□□ 2.43
CNOT7-204	ENST00000518885	RASSF10	A6NK89	507 aa		30.22	■■■□□ 2.43
CNOT7-204	ENST00000518885	GTF2I	P78347	998 aa		30.22	■■■□□ 2.43
CNOT7-204	ENST00000518885	SULF1	Q8IWU6	871 aa		30.22	■■■□□ 2.43
CNOT7-204	ENST00000518885	CELF2	O95319	508 aa	Known RBP	30.21	■■■□□ 2.43
CNOT7-204	ENST00000518885	IL1R1	P14778	569 aa		30.21	■■■□□ 2.43
CNOT7-204	ENST00000518885	PUS3	Q9BZE2	481 aa	Known RBP	30.21	■■■□□ 2.43
CNOT7-204	ENST00000518885	IRS2	Q9Y4H2	1338 aa		30.21	■■■□□ 2.43
CNOT7-204	ENST00000518885	SNAP23	O00161	211 aa		30.2	■■■□□ 2.43
CNOT7-204	ENST00000518885	EGFR	P00533	1210 aa		30.2	■■■□□ 2.43
CNOT7-204	ENST00000518885	USP48	Q86UV5	1035 aa		30.2	■■■□□ 2.43
CNOT7-204	ENST00000518885	FBXO3	Q9UK99	471 aa		30.2	■■■□□ 2.43
CNOT7-204	ENST00000518885	TRPM7	Q96QT4	1865 aa		30.19	■■■□□ 2.42
CNOT7-204	ENST00000518885	BCAR3	O75815	825 aa		30.19	■■■□□ 2.42
CNOT7-204	ENST00000518885	ZKSCAN2	Q63HK3	967 aa		30.19	■■■□□ 2.42
CNOT7-204	ENST00000518885	VPS37D	Q86XT2	251 aa		30.19	■■■□□ 2.42
CNOT7-204	ENST00000518885	GGA3	Q9NZ52	723 aa		30.19	■■■□□ 2.42
CNOT7-204	ENST00000518885	PDE8B	O95263	885 aa		30.18	■■■□□ 2.42
CNOT7-204	ENST00000518885	TRIM27	P14373	513 aa		30.18	■■■□□ 2.42
CNOT7-204	ENST00000518885	HIBADH	P31937	336 aa	Known RBP	30.18	■■■□□ 2.42
CNOT7-204	ENST00000518885	ECE1	P42892	770 aa		30.18	■■■□□ 2.42
CNOT7-204	ENST00000518885	FKBP1A	P62942	108 aa	Known RBP	30.18	■■■□□ 2.42
CNOT7-204	ENST00000518885	SCARF1	Q14162	830 aa		30.18	■■■□□ 2.42
CNOT7-204	ENST00000518885	CAVIN4	Q5BKX8	364 aa		30.18	■■■□□ 2.42
CNOT7-204	ENST00000518885	ZNF408	Q9H9D4	720 aa		30.18	■■■□□ 2.42
CNOT7-204	ENST00000518885	PITPNM2	Q9BZ72	1349 aa		30.18	■■■□□ 2.42
CNOT7-204	ENST00000518885	LRRC24	Q50LG9	513 aa		30.17	■■■□□ 2.42
CNOT7-204	ENST00000518885	CST9	Q5W186	159 aa		30.17	■■■□□ 2.42
CNOT7-204	ENST00000518885	TLL2	Q9Y6L7	1015 aa		30.17	■■■□□ 2.42
CNOT7-204	ENST00000518885	EYA2	O00167	538 aa		30.16	■■■□□ 2.42
CNOT7-204	ENST00000518885	SASH1	O94885	1247 aa		30.16	■■■□□ 2.42
CNOT7-204	ENST00000518885	LRRFIP2	Q9Y608	721 aa	Known RBP	30.16	■■■□□ 2.42
CNOT7-204	ENST00000518885	VEGFB	P49765	207 aa		30.15	■■■□□ 2.42
CNOT7-204	ENST00000518885	FMR1	Q06787	632 aa	Known RBP eCLIP	30.15	■■■□□ 2.42
CNOT7-204	ENST00000518885	PUM3	Q15397	648 aa	Known RBP	30.15	■■■□□ 2.42
CNOT7-204	ENST00000518885	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	30.15	■■■□□ 2.42
CNOT7-204	ENST00000518885	KIAA0825	Q8IV33	1275 aa		30.15	■■■□□ 2.42
CNOT7-204	ENST00000518885	MXD3	Q9BW11	206 aa		30.15	■■■□□ 2.42
CNOT7-204	ENST00000518885	IFIT1	P09914	478 aa	Known RBP	30.14	■■■□□ 2.42
CNOT7-204	ENST00000518885	ANGEL2	Q5VTE6	544 aa	Known RBP	30.14	■■■□□ 2.42
CNOT7-204	ENST00000518885	KLHDC4	Q8TBB5	520 aa		30.14	■■■□□ 2.42
CNOT7-204	ENST00000518885	MEIS3	Q99687	375 aa		30.14	■■■□□ 2.42
CNOT7-204	ENST00000518885	CIAO1	O76071	339 aa		30.13	■■■□□ 2.41
CNOT7-204	ENST00000518885	PTPN12	Q05209	780 aa	Known RBP	30.13	■■■□□ 2.41
CNOT7-204	ENST00000518885	HHIPL1	Q96JK4	782 aa		30.13	■■■□□ 2.41
CNOT7-204	ENST00000518885	FRAT2	O75474	233 aa	Predicted RBP	30.12	■■■□□ 2.41
CNOT7-204	ENST00000518885	RFX5	P48382	616 aa	Predicted RBP	30.12	■■■□□ 2.41
CNOT7-204	ENST00000518885	FTSJ3	Q8IY81	847 aa	Known RBP	30.12	■■■□□ 2.41
CNOT7-204	ENST00000518885	FAM84B	Q96KN1	310 aa	Predicted RBP	30.12	■■■□□ 2.41
CNOT7-204	ENST00000518885	ADM5	C9JUS6	153 aa		30.11	■■■□□ 2.41
CNOT7-204	ENST00000518885	GYG1	P46976	350 aa		30.11	■■■□□ 2.41
CNOT7-204	ENST00000518885	SAPCD2	Q86UD0	394 aa		30.11	■■■□□ 2.41
CNOT7-204	ENST00000518885	VGLL2	Q8N8G2	317 aa		30.11	■■■□□ 2.41
CNOT7-204	ENST00000518885	C2orf69	Q8N8R5	385 aa		30.11	■■■□□ 2.41
CNOT7-204	ENST00000518885	TDRD7	Q8NHU6	1098 aa	Known RBP	30.11	■■■□□ 2.41

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms