RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 LSG1Q9H089 658 aaKnown RBP18.16■□□□□ 0.5
TRAPPC9-205ENST00000518839 MED23Q9ULK4 1368 aa18.16■□□□□ 0.5
TRAPPC9-205ENST00000518839 TMC4Q7Z404 712 aa18.15■□□□□ 0.5
TRAPPC9-205ENST00000518839 HSCBQ8IWL3 235 aa18.15■□□□□ 0.5
TRAPPC9-205ENST00000518839 IL17RAQ96F46 866 aa18.15■□□□□ 0.5
TRAPPC9-205ENST00000518839 KIF2CQ99661 725 aa18.15■□□□□ 0.5
TRAPPC9-205ENST00000518839 BRIP1Q9BX63 1249 aa18.15■□□□□ 0.5
TRAPPC9-205ENST00000518839 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.15■□□□□ 0.5
TRAPPC9-205ENST00000518839 HELLSQ9NRZ9 838 aa18.15■□□□□ 0.5
TRAPPC9-205ENST00000518839 GNL3LQ9NVN8 582 aaKnown RBP18.15■□□□□ 0.5
TRAPPC9-205ENST00000518839 DOCK2Q92608 1830 aa18.14■□□□□ 0.5
TRAPPC9-205ENST00000518839 MYH13Q9UKX3 1938 aa18.14■□□□□ 0.49
TRAPPC9-205ENST00000518839 HOXA10P31260 410 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC9-205ENST00000518839 HSPA4P34932 840 aa18.14■□□□□ 0.49
TRAPPC9-205ENST00000518839 MCAMP43121 646 aa18.14■□□□□ 0.49
TRAPPC9-205ENST00000518839 PHKA1P46020 1223 aa18.14■□□□□ 0.49
TRAPPC9-205ENST00000518839 KCNJ4P48050 445 aa18.14■□□□□ 0.49
TRAPPC9-205ENST00000518839 MCMDC2Q4G0Z9 681 aa18.14■□□□□ 0.49
TRAPPC9-205ENST00000518839 CAVIN4Q5BKX8 364 aa18.14■□□□□ 0.49
TRAPPC9-205ENST00000518839 FAM227BQ96M60 508 aa18.14■□□□□ 0.49
TRAPPC9-205ENST00000518839 CRAMP1Q96RY5 1269 aa18.14■□□□□ 0.49
TRAPPC9-205ENST00000518839 IL25Q9H293 177 aa18.14■□□□□ 0.49
TRAPPC9-205ENST00000518839 CCDC171Q6TFL3 1326 aa18.14■□□□□ 0.49
TRAPPC9-205ENST00000518839 A0A0D9SFI3 127 aa18.13■□□□□ 0.49
TRAPPC9-205ENST00000518839 ZBTB22O15209 634 aa18.13■□□□□ 0.49
TRAPPC9-205ENST00000518839 RNF113AO15541 343 aaKnown RBP18.13■□□□□ 0.49
TRAPPC9-205ENST00000518839 BBOX1O75936 387 aa18.13■□□□□ 0.49
TRAPPC9-205ENST00000518839 ZAP70P43403 619 aa18.13■□□□□ 0.49
TRAPPC9-205ENST00000518839 ANO8Q9HCE9 1232 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC9-205ENST00000518839 NDUFB9Q9Y6M9 179 aa18.13■□□□□ 0.49
TRAPPC9-205ENST00000518839 MMP10P09238 476 aa18.12■□□□□ 0.49
TRAPPC9-205ENST00000518839 PDE6BP35913 854 aa18.12■□□□□ 0.49
TRAPPC9-205ENST00000518839 SCARF1Q14162 830 aa18.12■□□□□ 0.49
TRAPPC9-205ENST00000518839 ZMYM1Q5SVZ6 1142 aa18.12■□□□□ 0.49
TRAPPC9-205ENST00000518839 ERICH6Q7L0X2 663 aa18.12■□□□□ 0.49
TRAPPC9-205ENST00000518839 LEMD3Q9Y2U8 911 aa18.12■□□□□ 0.49
TRAPPC9-205ENST00000518839 LRRC37AA6NMS7 1700 aa18.12■□□□□ 0.49
TRAPPC9-205ENST00000518839 EP400Q96L91 3159 aa18.12■□□□□ 0.49
TRAPPC9-205ENST00000518839 SEMA3EO15041 775 aa18.11■□□□□ 0.49
TRAPPC9-205ENST00000518839 SPATA5Q8NB90 893 aa18.11■□□□□ 0.49
TRAPPC9-205ENST00000518839 TBC1D2Q9BYX2 928 aa18.11■□□□□ 0.49
TRAPPC9-205ENST00000518839 ZNF804BA4D1E1 1349 aa18.11■□□□□ 0.49
TRAPPC9-205ENST00000518839 XDHP47989 1333 aa18.1■□□□□ 0.49
TRAPPC9-205ENST00000518839 ST18O60284 1047 aa18.1■□□□□ 0.49
TRAPPC9-205ENST00000518839 RNF20Q5VTR2 975 aa18.1■□□□□ 0.49
TRAPPC9-205ENST00000518839 MAP4K1Q92918 833 aa18.1■□□□□ 0.49
TRAPPC9-205ENST00000518839 ANTXR1Q9H6X2 564 aa18.1■□□□□ 0.49
TRAPPC9-205ENST00000518839 HMG20BQ9P0W2 317 aa18.1■□□□□ 0.49
TRAPPC9-205ENST00000518839 MYO5AQ9Y4I1 1855 aaKnown RBP18.09■□□□□ 0.49
TRAPPC9-205ENST00000518839 CYP2E1P05181 493 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC9-205ENST00000518839 NPR1P16066 1061 aa18.09■□□□□ 0.49
TRAPPC9-205ENST00000518839 BCAMP50895 628 aa18.09■□□□□ 0.49
TRAPPC9-205ENST00000518839 VPS37DQ86XT2 251 aa18.09■□□□□ 0.49
TRAPPC9-205ENST00000518839 APPBP2Q92624 585 aa18.09■□□□□ 0.49
TRAPPC9-205ENST00000518839 PDS5AQ29RF7 1337 aaKnown RBP18.08■□□□□ 0.49
TRAPPC9-205ENST00000518839 ALDH1B1P30837 517 aa18.08■□□□□ 0.48
TRAPPC9-205ENST00000518839 PTH1RQ03431 593 aa18.08■□□□□ 0.48
TRAPPC9-205ENST00000518839 RASGRF1Q13972 1273 aa18.08■□□□□ 0.48
TRAPPC9-205ENST00000518839 SLC16A10Q8TF71 515 aa18.08■□□□□ 0.48
TRAPPC9-205ENST00000518839 KCNB2Q92953 911 aa18.08■□□□□ 0.48
TRAPPC9-205ENST00000518839 DENND2AQ9ULE3 1009 aa18.08■□□□□ 0.48
TRAPPC9-205ENST00000518839 U3KPZ7 1027 aaPredicted RBP18.08■□□□□ 0.48
TRAPPC9-205ENST00000518839 SNAP23O00161 211 aa18.07■□□□□ 0.48
TRAPPC9-205ENST00000518839 IGSF3O75054 1194 aa18.07■□□□□ 0.48
TRAPPC9-205ENST00000518839 ZKSCAN1P17029 563 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC9-205ENST00000518839 ATP2B4P23634 1241 aa18.07■□□□□ 0.48
TRAPPC9-205ENST00000518839 MCM2P49736 904 aa18.07■□□□□ 0.48
TRAPPC9-205ENST00000518839 MAP3K12Q12852 859 aa18.07■□□□□ 0.48
TRAPPC9-205ENST00000518839 UBE3CQ15386 1083 aa18.07■□□□□ 0.48
TRAPPC9-205ENST00000518839 C15orf52Q6ZUT6 534 aaKnown RBP18.07■□□□□ 0.48
TRAPPC9-205ENST00000518839 FBXO33Q7Z6M2 555 aa18.07■□□□□ 0.48
TRAPPC9-205ENST00000518839 DEFB132Q7Z7B7 95 aa18.07■□□□□ 0.48
TRAPPC9-205ENST00000518839 ZNF589Q86UQ0 364 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC9-205ENST00000518839 DSCC1Q9BVC3 393 aa18.07■□□□□ 0.48
TRAPPC9-205ENST00000518839 ANKIB1Q9P2G1 1089 aa18.07■□□□□ 0.48
TRAPPC9-205ENST00000518839 RBM8AQ9Y5S9 174 aaKnown RBP18.07■□□□□ 0.48
TRAPPC9-205ENST00000518839 COL11A2P13942 1736 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC9-205ENST00000518839 SRGNP10124 158 aa18.06■□□□□ 0.48
TRAPPC9-205ENST00000518839 HIBADHP31937 336 aaKnown RBP18.06■□□□□ 0.48
TRAPPC9-205ENST00000518839 ADD2P35612 726 aa18.06■□□□□ 0.48
TRAPPC9-205ENST00000518839 NECTIN1Q15223 517 aa18.06■□□□□ 0.48
TRAPPC9-205ENST00000518839 WASHC4Q2M389 1173 aa18.06■□□□□ 0.48
TRAPPC9-205ENST00000518839 MSL1Q68DK7 614 aa18.06■□□□□ 0.48
TRAPPC9-205ENST00000518839 PI16Q6UXB8 463 aa18.06■□□□□ 0.48
TRAPPC9-205ENST00000518839 MASTLQ96GX5 879 aa18.06■□□□□ 0.48
TRAPPC9-205ENST00000518839 FAM84BQ96KN1 310 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC9-205ENST00000518839 MAST3O60307 1309 aa18.05■□□□□ 0.48
TRAPPC9-205ENST00000518839 K7ELQ4 463 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC9-205ENST00000518839 PPEF1O14829 653 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC9-205ENST00000518839 IDH1O75874 414 aaKnown RBP18.05■□□□□ 0.48
TRAPPC9-205ENST00000518839 GYG1P46976 350 aa18.05■□□□□ 0.48
TRAPPC9-205ENST00000518839 TMED8Q6PL24 325 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC9-205ENST00000518839 SP8Q8IXZ3 490 aa18.05■□□□□ 0.48
TRAPPC9-205ENST00000518839 PIH1D3Q9NQM4 214 aaKnown RBP18.05■□□□□ 0.48
TRAPPC9-205ENST00000518839 PODXL2Q9NZ53 605 aa18.05■□□□□ 0.48
TRAPPC9-205ENST00000518839 PALD1Q9ULE6 856 aa18.05■□□□□ 0.48
TRAPPC9-205ENST00000518839 SNX14Q9Y5W7 946 aa18.05■□□□□ 0.48
TRAPPC9-205ENST00000518839 DUOX1Q9NRD9 1551 aa18.04■□□□□ 0.48
TRAPPC9-205ENST00000518839 CCDC88AQ3V6T2 1871 aa18.04■□□□□ 0.48
TRAPPC9-205ENST00000518839 SLC4A3P48751 1232 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms