RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 RIPOR2Q9Y4F9 1068 aa16.74■□□□□ 0.27
VEGFA-219ENST00000518824 SAMD7Q7Z3H4 446 aa16.73■□□□□ 0.27
VEGFA-219ENST00000518824 PNMA8AQ86V59 439 aaPredicted RBP16.73■□□□□ 0.27
VEGFA-219ENST00000518824 DNAJC5GQ8N7S2 189 aa16.73■□□□□ 0.27
VEGFA-219ENST00000518824 ADARB2Q9NS39 739 aaKnown RBP16.73■□□□□ 0.27
VEGFA-219ENST00000518824 LRRFIP2Q9Y608 721 aaKnown RBP16.73■□□□□ 0.27
VEGFA-219ENST00000518824 PASKQ96RG2 1323 aa16.72■□□□□ 0.27
VEGFA-219ENST00000518824 UBTFL1P0CB47 393 aaPredicted RBP16.72■□□□□ 0.27
VEGFA-219ENST00000518824 CNTROBQ8N137 903 aa16.72■□□□□ 0.27
VEGFA-219ENST00000518824 CEP350Q5VT06 3117 aa16.71■□□□□ 0.27
VEGFA-219ENST00000518824 RLBP1P12271 317 aa16.71■□□□□ 0.27
VEGFA-219ENST00000518824 KCNJ4P48050 445 aa16.71■□□□□ 0.27
VEGFA-219ENST00000518824 TBC1D10BQ4KMP7 808 aaPredicted RBP16.71■□□□□ 0.27
VEGFA-219ENST00000518824 DLK2Q6UY11 383 aa16.71■□□□□ 0.27
VEGFA-219ENST00000518824 USP50Q70EL3 339 aaPredicted RBP16.71■□□□□ 0.27
VEGFA-219ENST00000518824 TMEM57Q8N5G2 664 aa16.71■□□□□ 0.27
VEGFA-219ENST00000518824 GMLQ99445 158 aa16.71■□□□□ 0.27
VEGFA-219ENST00000518824 TRAF5O00463 557 aa16.7■□□□□ 0.26
VEGFA-219ENST00000518824 PTPN12Q05209 780 aaKnown RBP16.7■□□□□ 0.26
VEGFA-219ENST00000518824 RBM26Q5T8P6 1007 aaKnown RBP16.7■□□□□ 0.26
VEGFA-219ENST00000518824 ZKSCAN2Q63HK3 967 aa16.7■□□□□ 0.26
VEGFA-219ENST00000518824 RSBN1LQ6PCB5 846 aaPredicted RBP16.7■□□□□ 0.26
VEGFA-219ENST00000518824 PODNQ7Z5L7 613 aa16.7■□□□□ 0.26
VEGFA-219ENST00000518824 DPF2Q92785 391 aa16.7■□□□□ 0.26
VEGFA-219ENST00000518824 COA1Q9GZY4 146 aa16.7■□□□□ 0.26
VEGFA-219ENST00000518824 ASTN2O75129 1339 aaPredicted RBP16.7■□□□□ 0.26
VEGFA-219ENST00000518824 USP17L3A6NCW0 530 aa16.69■□□□□ 0.26
VEGFA-219ENST00000518824 USP17L4A6NCW7 530 aa16.69■□□□□ 0.26
VEGFA-219ENST00000518824 IPO8O15397 1037 aaKnown RBP16.69■□□□□ 0.26
VEGFA-219ENST00000518824 DACT2Q5SW24 774 aa16.69■□□□□ 0.26
VEGFA-219ENST00000518824 C15orf52Q6ZUT6 534 aaKnown RBP16.69■□□□□ 0.26
VEGFA-219ENST00000518824 USP17L1Q7RTZ2 530 aa16.69■□□□□ 0.26
VEGFA-219ENST00000518824 VGLL2Q8N8G2 317 aa16.69■□□□□ 0.26
VEGFA-219ENST00000518824 FBXW7Q969H0 707 aa16.69■□□□□ 0.26
VEGFA-219ENST00000518824 CD209Q9NNX6 404 aa16.69■□□□□ 0.26
VEGFA-219ENST00000518824 PA2G4Q9UQ80 394 aaKnown RBP16.69■□□□□ 0.26
VEGFA-219ENST00000518824 POLR2AP24928 1970 aaKnown RBP16.69■□□□□ 0.26
VEGFA-219ENST00000518824 H7C1D1 291 aa16.68■□□□□ 0.26
VEGFA-219ENST00000518824 RPS12P25398 132 aaKnown RBP16.68■□□□□ 0.26
VEGFA-219ENST00000518824 JAG2Q9Y219 1238 aa16.68■□□□□ 0.26
VEGFA-219ENST00000518824 GYG1P46976 350 aa16.67■□□□□ 0.26
VEGFA-219ENST00000518824 GTF2IP78347 998 aa16.67■□□□□ 0.26
VEGFA-219ENST00000518824 METTL24Q5JXM2 366 aa16.67■□□□□ 0.26
VEGFA-219ENST00000518824 ATG9AQ7Z3C6 839 aa16.67■□□□□ 0.26
VEGFA-219ENST00000518824 GLIS2Q9BZE0 524 aaPredicted RBP16.67■□□□□ 0.26
VEGFA-219ENST00000518824 SIL1Q9H173 461 aa16.67■□□□□ 0.26
VEGFA-219ENST00000518824 PGAP2Q9UHJ9 254 aa16.67■□□□□ 0.26
VEGFA-219ENST00000518824 ZNF609O15014 1411 aa16.66■□□□□ 0.26
VEGFA-219ENST00000518824 ZNF280AP59817 542 aaPredicted RBP16.66■□□□□ 0.26
VEGFA-219ENST00000518824 UBE4AQ14139 1066 aa16.66■□□□□ 0.26
VEGFA-219ENST00000518824 TTLL5Q6EMB2 1281 aa16.66■□□□□ 0.26
VEGFA-219ENST00000518824 CERS5Q8N5B7 392 aa16.66■□□□□ 0.26
VEGFA-219ENST00000518824 FAM84BQ96KN1 310 aaPredicted RBP16.66■□□□□ 0.26
VEGFA-219ENST00000518824 MROH5Q6ZUA9 1318 aa16.66■□□□□ 0.26
VEGFA-219ENST00000518824 EYA2O00167 538 aa16.65■□□□□ 0.26
VEGFA-219ENST00000518824 IL1R1P14778 569 aa16.65■□□□□ 0.26
VEGFA-219ENST00000518824 KIF4BQ2VIQ3 1234 aa16.65■□□□□ 0.26
VEGFA-219ENST00000518824 STRIP1Q5VSL9 837 aa16.65■□□□□ 0.26
VEGFA-219ENST00000518824 AGBL3Q8NEM8 1001 aa16.65■□□□□ 0.26
VEGFA-219ENST00000518824 PANK1Q8TE04 598 aa16.65■□□□□ 0.26
VEGFA-219ENST00000518824 PDE8BO95263 885 aa16.64■□□□□ 0.25
VEGFA-219ENST00000518824 GNAI3P08754 354 aa16.64■□□□□ 0.25
VEGFA-219ENST00000518824 DZIP1LQ8IYY4 767 aaKnown RBP16.64■□□□□ 0.25
VEGFA-219ENST00000518824 KLRG1Q96E93 195 aa16.64■□□□□ 0.25
VEGFA-219ENST00000518824 C1orf115Q9H7X2 142 aa16.64■□□□□ 0.25
VEGFA-219ENST00000518824 SCAF8Q9UPN6 1271 aaKnown RBP16.64■□□□□ 0.25
VEGFA-219ENST00000518824 IQSEC3Q9UPP2 1182 aaPredicted RBP16.64■□□□□ 0.25
VEGFA-219ENST00000518824 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.64■□□□□ 0.25
VEGFA-219ENST00000518824 TRPM7Q96QT4 1865 aa16.63■□□□□ 0.25
VEGFA-219ENST00000518824 PNMA6EA0A0J9YXQ4 647 aa16.63■□□□□ 0.25
VEGFA-219ENST00000518824 USP17L8P0C7I0 530 aa16.63■□□□□ 0.25
VEGFA-219ENST00000518824 FGFR2P21802 821 aa16.63■□□□□ 0.25
VEGFA-219ENST00000518824 CST9Q5W186 159 aa16.63■□□□□ 0.25
VEGFA-219ENST00000518824 ZNF804AQ7Z570 1209 aa16.63■□□□□ 0.25
VEGFA-219ENST00000518824 USP48Q86UV5 1035 aa16.63■□□□□ 0.25
VEGFA-219ENST00000518824 KIAA0825Q8IV33 1275 aa16.63■□□□□ 0.25
VEGFA-219ENST00000518824 CREBZFQ9NS37 354 aa16.63■□□□□ 0.25
VEGFA-219ENST00000518824 MKRN1Q9UHC7 482 aaKnown RBP16.63■□□□□ 0.25
VEGFA-219ENST00000518824 PCDHAC2Q9Y5I4 1007 aa16.63■□□□□ 0.25
VEGFA-219ENST00000518824 ADM5C9JUS6 153 aa16.62■□□□□ 0.25
VEGFA-219ENST00000518824 FBXO33Q7Z6M2 555 aa16.62■□□□□ 0.25
VEGFA-219ENST00000518824 TDRD7Q8NHU6 1098 aaKnown RBP16.62■□□□□ 0.25
VEGFA-219ENST00000518824 ZC3H15Q8WU90 426 aaKnown RBP16.62■□□□□ 0.25
VEGFA-219ENST00000518824 MYOZ2Q9NPC6 264 aa16.62■□□□□ 0.25
VEGFA-219ENST00000518824 TMEM88BA6NKF7 163 aa16.61■□□□□ 0.25
VEGFA-219ENST00000518824 SRGAP3O43295 1099 aa16.61■□□□□ 0.25
VEGFA-219ENST00000518824 GNAI2P04899 355 aa16.61■□□□□ 0.25
VEGFA-219ENST00000518824 HIBADHP31937 336 aaKnown RBP16.61■□□□□ 0.25
VEGFA-219ENST00000518824 BCAMP50895 628 aa16.61■□□□□ 0.25
VEGFA-219ENST00000518824 MTX1Q13505 466 aa16.61■□□□□ 0.25
VEGFA-219ENST00000518824 SCARF1Q14162 830 aa16.61■□□□□ 0.25
VEGFA-219ENST00000518824 GRIK5Q16478 980 aa16.61■□□□□ 0.25
VEGFA-219ENST00000518824 NBPF9Q3BBW0 867 aa16.61■□□□□ 0.25
VEGFA-219ENST00000518824 ITPRIPQ8IWB1 547 aa16.61■□□□□ 0.25
VEGFA-219ENST00000518824 COPRSQ9NQ92 184 aa16.61■□□□□ 0.25
VEGFA-219ENST00000518824 GGA3Q9NZ52 723 aa16.61■□□□□ 0.25
VEGFA-219ENST00000518824 F8W031 263 aaPredicted RBP16.6■□□□□ 0.25
VEGFA-219ENST00000518824 ZBTB7BO15156 539 aaPredicted RBP16.6■□□□□ 0.25
VEGFA-219ENST00000518824 FTSJ3Q8IY81 847 aaKnown RBP16.6■□□□□ 0.25
VEGFA-219ENST00000518824 RCAN3Q9UKA8 241 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms