RNA–Protein interactions for RNA: ENST00000518711.1

SPIDR-208, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-208ENST00000518711 ADAMTS19Q8TE59 1207 aa7.43□□□□□ -1.22
SPIDR-208ENST00000518711 ZBTB3Q9H5J0 574 aa7.43□□□□□ -1.22
SPIDR-208ENST00000518711 PODXL2Q9NZ53 605 aa7.43□□□□□ -1.22
SPIDR-208ENST00000518711 SH3TC1Q8TE82 1336 aa7.43□□□□□ -1.22
SPIDR-208ENST00000518711 ANKRD36CQ5JPF3 1778 aa7.43□□□□□ -1.22
SPIDR-208ENST00000518711 NCOR1O75376 2440 aa7.42□□□□□ -1.22
SPIDR-208ENST00000518711 UNCXA6NJT0 531 aa7.42□□□□□ -1.22
SPIDR-208ENST00000518711 KRT37O76014 449 aa7.42□□□□□ -1.22
SPIDR-208ENST00000518711 INHBEP58166 350 aa7.42□□□□□ -1.22
SPIDR-208ENST00000518711 DCTN1Q14203 1278 aa7.42□□□□□ -1.22
SPIDR-208ENST00000518711 TMEM31Q5JXX7 168 aa7.42□□□□□ -1.22
SPIDR-208ENST00000518711 ZNF697Q5TEC3 545 aa7.42□□□□□ -1.22
SPIDR-208ENST00000518711 NKX2-3Q8TAU0 364 aa7.42□□□□□ -1.22
SPIDR-208ENST00000518711 UHRF1Q96T88 793 aaPredicted RBP7.42□□□□□ -1.22
SPIDR-208ENST00000518711 MIS18AQ9NYP9 233 aa7.42□□□□□ -1.22
SPIDR-208ENST00000518711 CACNA1BQ00975 2339 aa7.42□□□□□ -1.22
SPIDR-208ENST00000518711 ADM5C9JUS6 153 aa7.41□□□□□ -1.22
SPIDR-208ENST00000518711 TCERG1O14776 1098 aaKnown RBP7.41□□□□□ -1.22
SPIDR-208ENST00000518711 MYL6BP14649 208 aa7.41□□□□□ -1.22
SPIDR-208ENST00000518711 PPP2R1AP30153 589 aa7.41□□□□□ -1.22
SPIDR-208ENST00000518711 MAP3K11Q16584 847 aa7.41□□□□□ -1.22
SPIDR-208ENST00000518711 KIF4BQ2VIQ3 1234 aa7.41□□□□□ -1.22
SPIDR-208ENST00000518711 NGEFQ8N5V2 710 aa7.41□□□□□ -1.22
SPIDR-208ENST00000518711 PLEKHF1Q96S99 279 aa7.41□□□□□ -1.22
SPIDR-208ENST00000518711 TRMT112Q9UI30 125 aaKnown RBP7.41□□□□□ -1.22
SPIDR-208ENST00000518711 PTCH2Q9Y6C5 1203 aa7.41□□□□□ -1.22
SPIDR-208ENST00000518711 RPS8P62241 208 aaKnown RBP7.4□□□□□ -1.22
SPIDR-208ENST00000518711 MKRN3Q13064 507 aaKnown RBP7.4□□□□□ -1.22
SPIDR-208ENST00000518711 NFE2L2Q16236 605 aa7.4□□□□□ -1.22
SPIDR-208ENST00000518711 TBC1D10BQ4KMP7 808 aaPredicted RBP7.4□□□□□ -1.22
SPIDR-208ENST00000518711 PODNQ7Z5L7 613 aa7.4□□□□□ -1.22
SPIDR-208ENST00000518711 MYLIPQ8WY64 445 aa7.4□□□□□ -1.22
SPIDR-208ENST00000518711 CDCA5Q96FF9 252 aa7.4□□□□□ -1.22
SPIDR-208ENST00000518711 GMLQ99445 158 aa7.4□□□□□ -1.22
SPIDR-208ENST00000518711 ZC3H12CQ9C0D7 883 aaKnown RBP7.4□□□□□ -1.22
SPIDR-208ENST00000518711 POLLQ9UGP5 575 aa7.4□□□□□ -1.22
SPIDR-208ENST00000518711 NSFL1CQ9UNZ2 370 aaKnown RBP7.4□□□□□ -1.22
SPIDR-208ENST00000518711 ZBTB12Q9Y330 459 aaPredicted RBP7.4□□□□□ -1.22
SPIDR-208ENST00000518711 CHD8Q9HCK8 2581 aa7.4□□□□□ -1.23
SPIDR-208ENST00000518711 RTL9Q8NET4 1388 aa7.39□□□□□ -1.23
SPIDR-208ENST00000518711 SHTN1A0MZ66 631 aa7.39□□□□□ -1.23
SPIDR-208ENST00000518711 ECE2O60344 883 aa7.39□□□□□ -1.23
SPIDR-208ENST00000518711 ECM2O94769 699 aaPredicted RBP7.39□□□□□ -1.23
SPIDR-208ENST00000518711 EGFRP00533 1210 aa7.39□□□□□ -1.23
SPIDR-208ENST00000518711 HOXB7P09629 217 aa7.39□□□□□ -1.23
SPIDR-208ENST00000518711 USP17L8P0C7I0 530 aa7.39□□□□□ -1.23
SPIDR-208ENST00000518711 HCLS1P14317 486 aaPredicted RBP7.39□□□□□ -1.23
SPIDR-208ENST00000518711 FOSL2P15408 326 aa7.39□□□□□ -1.23
SPIDR-208ENST00000518711 SCARF1Q14162 830 aa7.39□□□□□ -1.23
SPIDR-208ENST00000518711 RSBN1LQ6PCB5 846 aaPredicted RBP7.39□□□□□ -1.23
SPIDR-208ENST00000518711 COPS6Q7L5N1 327 aa7.39□□□□□ -1.23
SPIDR-208ENST00000518711 PLBD2Q8NHP8 589 aa7.39□□□□□ -1.23
SPIDR-208ENST00000518711 TBC1D16Q8TBP0 767 aa7.39□□□□□ -1.23
SPIDR-208ENST00000518711 SH3TC2Q8TF17 1288 aa7.39□□□□□ -1.23
SPIDR-208ENST00000518711 ATXN2LQ8WWM7 1075 aaKnown RBP7.39□□□□□ -1.23
SPIDR-208ENST00000518711 UBE2OQ9C0C9 1292 aaKnown RBP7.39□□□□□ -1.23
SPIDR-208ENST00000518711 KDM3BQ7LBC6 1761 aa7.38□□□□□ -1.23
SPIDR-208ENST00000518711 LRRC37AA6NMS7 1700 aa7.38□□□□□ -1.23
SPIDR-208ENST00000518711 DUOX1Q9NRD9 1551 aa7.38□□□□□ -1.23
SPIDR-208ENST00000518711 C6orf229H3BNL8 230 aa7.38□□□□□ -1.23
SPIDR-208ENST00000518711 RGS20O76081 388 aa7.38□□□□□ -1.23
SPIDR-208ENST00000518711 FARP2O94887 1054 aaPredicted RBP7.38□□□□□ -1.23
SPIDR-208ENST00000518711 NF2P35240 595 aa7.38□□□□□ -1.23
SPIDR-208ENST00000518711 GJA8P48165 433 aa7.38□□□□□ -1.23
SPIDR-208ENST00000518711 CAP1Q01518 475 aa7.38□□□□□ -1.23
SPIDR-208ENST00000518711 KCTD2Q14681 263 aa7.38□□□□□ -1.23
SPIDR-208ENST00000518711 ARHGEF6Q15052 776 aa7.38□□□□□ -1.23
SPIDR-208ENST00000518711 ASB2Q96Q27 587 aa7.38□□□□□ -1.23
SPIDR-208ENST00000518711 ISCA1Q9BUE6 129 aa7.38□□□□□ -1.23
SPIDR-208ENST00000518711 SEMA6BQ9H3T3 888 aa7.38□□□□□ -1.23
SPIDR-208ENST00000518711 EPHX3Q9H6B9 360 aa7.38□□□□□ -1.23
SPIDR-208ENST00000518711 DBNDD1Q9H9R9 158 aa7.38□□□□□ -1.23
SPIDR-208ENST00000518711 GGA3Q9NZ52 723 aa7.38□□□□□ -1.23
SPIDR-208ENST00000518711 ZMYND8Q9ULU4 1186 aaPredicted RBP7.38□□□□□ -1.23
SPIDR-208ENST00000518711 MYO3BQ8WXR4 1341 aa7.37□□□□□ -1.23
SPIDR-208ENST00000518711 MAGEA10P43363 369 aaPredicted RBP7.37□□□□□ -1.23
SPIDR-208ENST00000518711 GPSM2P81274 684 aa7.37□□□□□ -1.23
SPIDR-208ENST00000518711 SP3Q02447 781 aa7.37□□□□□ -1.23
SPIDR-208ENST00000518711 NHLH1Q02575 133 aa7.37□□□□□ -1.23
SPIDR-208ENST00000518711 LMOD3Q0VAK6 560 aa7.37□□□□□ -1.23
SPIDR-208ENST00000518711 MTFR1Q15390 333 aa7.37□□□□□ -1.23
SPIDR-208ENST00000518711 LDLRAD1Q5T700 205 aa7.37□□□□□ -1.23
SPIDR-208ENST00000518711 RBM26Q5T8P6 1007 aaKnown RBP7.37□□□□□ -1.23
SPIDR-208ENST00000518711 ANGEL2Q5VTE6 544 aaKnown RBP7.37□□□□□ -1.23
SPIDR-208ENST00000518711 SLC51AQ86UW1 340 aa7.37□□□□□ -1.23
SPIDR-208ENST00000518711 XAGE3Q8WTP9 111 aa7.37□□□□□ -1.23
SPIDR-208ENST00000518711 CELF1Q92879 486 aaKnown RBP7.37□□□□□ -1.23
SPIDR-208ENST00000518711 CHMP4AQ9BY43 222 aa7.37□□□□□ -1.23
SPIDR-208ENST00000518711 MYOZ2Q9NPC6 264 aa7.37□□□□□ -1.23
SPIDR-208ENST00000518711 KCNQ5Q9NR82 932 aa7.37□□□□□ -1.23
SPIDR-208ENST00000518711 TSPYL4Q9UJ04 414 aa7.37□□□□□ -1.23
SPIDR-208ENST00000518711 BDP1A6H8Y1 2624 aa7.37□□□□□ -1.23
SPIDR-208ENST00000518711 ZDBF2Q9HCK1 2354 aa7.36□□□□□ -1.23
SPIDR-208ENST00000518711 USP17L3A6NCW0 530 aa7.36□□□□□ -1.23
SPIDR-208ENST00000518711 USP17L4A6NCW7 530 aa7.36□□□□□ -1.23
SPIDR-208ENST00000518711 MANSC4A6NHS7 340 aaPredicted RBP7.36□□□□□ -1.23
SPIDR-208ENST00000518711 UBE2Q2LH0YL09 131 aa7.36□□□□□ -1.23
SPIDR-208ENST00000518711 CHL1O00533 1208 aa7.36□□□□□ -1.23
SPIDR-208ENST00000518711 ST18O60284 1047 aa7.36□□□□□ -1.23
SPIDR-208ENST00000518711 GJB1P08034 283 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms