RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 SEC31BQ9NQW1 1179 aa11.57□□□□□ -0.56
PVT1-207ENST00000518528 ANKRD36CQ5JPF3 1778 aa11.56□□□□□ -0.56
PVT1-207ENST00000518528 UNCXA6NJT0 531 aa11.56□□□□□ -0.56
PVT1-207ENST00000518528 PDE8AO60658 829 aa11.56□□□□□ -0.56
PVT1-207ENST00000518528 EN2P19622 333 aaPredicted RBP11.56□□□□□ -0.56
PVT1-207ENST00000518528 STRIP1Q5VSL9 837 aa11.56□□□□□ -0.56
PVT1-207ENST00000518528 RIC3Q7Z5B4 369 aa11.56□□□□□ -0.56
PVT1-207ENST00000518528 CDC5LQ99459 802 aaKnown RBP11.56□□□□□ -0.56
PVT1-207ENST00000518528 LRRC37AA6NMS7 1700 aa11.55□□□□□ -0.56
PVT1-207ENST00000518528 SLC4A8Q2Y0W8 1093 aa11.55□□□□□ -0.56
PVT1-207ENST00000518528 DACT2Q5SW24 774 aa11.55□□□□□ -0.56
PVT1-207ENST00000518528 CD99L2Q8TCZ2 262 aa11.55□□□□□ -0.56
PVT1-207ENST00000518528 COA1Q9GZY4 146 aa11.55□□□□□ -0.56
PVT1-207ENST00000518528 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.55□□□□□ -0.56
PVT1-207ENST00000518528 COLQQ9Y215 455 aaPredicted RBP11.55□□□□□ -0.56
PVT1-207ENST00000518528 LAS1LQ9Y4W2 734 aaKnown RBP11.55□□□□□ -0.56
PVT1-207ENST00000518528 KIAA0100Q14667 2235 aaKnown RBP11.55□□□□□ -0.56
PVT1-207ENST00000518528 POLR2AP24928 1970 aaKnown RBP11.54□□□□□ -0.56
PVT1-207ENST00000518528 CHL1O00533 1208 aa11.54□□□□□ -0.56
PVT1-207ENST00000518528 SASH1O94885 1247 aa11.54□□□□□ -0.56
PVT1-207ENST00000518528 PCCAP05165 728 aaPredicted RBP11.54□□□□□ -0.56
PVT1-207ENST00000518528 SP3Q02447 781 aa11.54□□□□□ -0.56
PVT1-207ENST00000518528 SUPT20HL1Q3ZLR7 823 aa11.54□□□□□ -0.56
PVT1-207ENST00000518528 CCDC191Q8NCU4 936 aa11.54□□□□□ -0.56
PVT1-207ENST00000518528 WNK4Q96J92 1243 aa11.54□□□□□ -0.56
PVT1-207ENST00000518528 PPP2R3BQ9Y5P8 575 aa11.54□□□□□ -0.56
PVT1-207ENST00000518528 MED23Q9ULK4 1368 aa11.54□□□□□ -0.56
PVT1-207ENST00000518528 MYO1BO43795 1136 aa11.53□□□□□ -0.56
PVT1-207ENST00000518528 WDHD1O75717 1129 aaPredicted RBP11.53□□□□□ -0.56
PVT1-207ENST00000518528 TMPOP42166 694 aaKnown RBP11.53□□□□□ -0.56
PVT1-207ENST00000518528 IREB2P48200 963 aaKnown RBP11.53□□□□□ -0.56
PVT1-207ENST00000518528 DLGAP5Q15398 846 aa11.53□□□□□ -0.56
PVT1-207ENST00000518528 MAP3K11Q16584 847 aa11.53□□□□□ -0.56
PVT1-207ENST00000518528 SLC9C1Q4G0N8 1177 aa11.53□□□□□ -0.56
PVT1-207ENST00000518528 TTLL5Q6EMB2 1281 aa11.53□□□□□ -0.56
PVT1-207ENST00000518528 CCDC85AQ96PX6 553 aaPredicted RBP11.53□□□□□ -0.56
PVT1-207ENST00000518528 DEFB129Q9H1M3 183 aa11.53□□□□□ -0.56
PVT1-207ENST00000518528 CWC25Q9NXE8 425 aaPredicted RBP11.53□□□□□ -0.56
PVT1-207ENST00000518528 DDX60Q8IY21 1712 aaKnown RBP11.52□□□□□ -0.56
PVT1-207ENST00000518528 IGF2BP3O00425 579 aaKnown RBP eCLIP11.52□□□□□ -0.57
PVT1-207ENST00000518528 CRHR2Q13324 411 aa11.52□□□□□ -0.57
PVT1-207ENST00000518528 KRT24Q2M2I5 525 aa11.52□□□□□ -0.57
PVT1-207ENST00000518528 KIAA0825Q8IV33 1275 aa11.52□□□□□ -0.57
PVT1-207ENST00000518528 ZNF333Q96JL9 665 aa11.52□□□□□ -0.57
PVT1-207ENST00000518528 MXD3Q9BW11 206 aa11.52□□□□□ -0.57
PVT1-207ENST00000518528 CHMP4AQ9BY43 222 aa11.52□□□□□ -0.57
PVT1-207ENST00000518528 BSDC1Q9NW68 430 aaPredicted RBP11.52□□□□□ -0.57
PVT1-207ENST00000518528 LEMD3Q9Y2U8 911 aa11.52□□□□□ -0.57
PVT1-207ENST00000518528 COL1A1P02452 1464 aaPredicted RBP11.51□□□□□ -0.57
PVT1-207ENST00000518528 DDX58O95786 925 aaKnown RBP11.51□□□□□ -0.57
PVT1-207ENST00000518528 CCT4P50991 539 aaKnown RBP11.51□□□□□ -0.57
PVT1-207ENST00000518528 MYD88Q99836 296 aa11.51□□□□□ -0.57
PVT1-207ENST00000518528 MINPP1Q9UNW1 487 aa11.51□□□□□ -0.57
PVT1-207ENST00000518528 TRIOBPQ9H2D6 2365 aa11.51□□□□□ -0.57
PVT1-207ENST00000518528 LAMB2P55268 1798 aa11.51□□□□□ -0.57
PVT1-207ENST00000518528 H0YGN5 161 aa11.5□□□□□ -0.57
PVT1-207ENST00000518528 DLL1O00548 723 aa11.5□□□□□ -0.57
PVT1-207ENST00000518528 IGHMBP2P38935 993 aaKnown RBP11.5□□□□□ -0.57
PVT1-207ENST00000518528 CTSWP56202 376 aa11.5□□□□□ -0.57
PVT1-207ENST00000518528 NEUROD2Q15784 382 aa11.5□□□□□ -0.57
PVT1-207ENST00000518528 DUSP27Q5VZP5 1158 aa11.5□□□□□ -0.57
PVT1-207ENST00000518528 SLC17A8Q8NDX2 589 aa11.5□□□□□ -0.57
PVT1-207ENST00000518528 CLMNQ96JQ2 1002 aa11.5□□□□□ -0.57
PVT1-207ENST00000518528 ANKRD2Q9GZV1 360 aa11.5□□□□□ -0.57
PVT1-207ENST00000518528 ZFYVE28Q9HCC9 887 aa11.5□□□□□ -0.57
PVT1-207ENST00000518528 CEP290O15078 2479 aa11.49□□□□□ -0.57
PVT1-207ENST00000518528 KCNJ4P48050 445 aa11.49□□□□□ -0.57
PVT1-207ENST00000518528 GTF2IP78347 998 aa11.49□□□□□ -0.57
PVT1-207ENST00000518528 KIF22Q14807 665 aa11.49□□□□□ -0.57
PVT1-207ENST00000518528 ANKRD13AQ8IZ07 590 aa11.49□□□□□ -0.57
PVT1-207ENST00000518528 ZBED3Q96IU2 234 aaPredicted RBP11.49□□□□□ -0.57
PVT1-207ENST00000518528 SCN9AQ15858 1988 aa11.48□□□□□ -0.57
PVT1-207ENST00000518528 TESPA1A2RU30 521 aaPredicted RBP11.48□□□□□ -0.57
PVT1-207ENST00000518528 CHRDL2Q6WN34 429 aa11.48□□□□□ -0.57
PVT1-207ENST00000518528 MTMR14Q8NCE2 650 aa11.48□□□□□ -0.57
PVT1-207ENST00000518528 DPF3Q92784 378 aa11.48□□□□□ -0.57
PVT1-207ENST00000518528 TAF1P21675 1872 aa11.47□□□□□ -0.57
PVT1-207ENST00000518528 ZNF804BA4D1E1 1349 aa11.47□□□□□ -0.57
PVT1-207ENST00000518528 TNFAIP1Q13829 316 aa11.47□□□□□ -0.57
PVT1-207ENST00000518528 TAF1CQ15572 869 aaPredicted RBP11.47□□□□□ -0.57
PVT1-207ENST00000518528 JARID2Q92833 1246 aaPredicted RBP11.47□□□□□ -0.57
PVT1-207ENST00000518528 OTUD5Q96G74 571 aa11.47□□□□□ -0.57
PVT1-207ENST00000518528 MPHOSPH8Q99549 860 aa11.47□□□□□ -0.57
PVT1-207ENST00000518528 METTL22Q9BUU2 404 aaPredicted RBP11.47□□□□□ -0.57
PVT1-207ENST00000518528 VEZTQ9HBM0 779 aa11.47□□□□□ -0.57
PVT1-207ENST00000518528 FZD1Q9UP38 647 aa11.47□□□□□ -0.57
PVT1-207ENST00000518528 PTCH2Q9Y6C5 1203 aa11.47□□□□□ -0.57
PVT1-207ENST00000518528 MYCP01106 439 aaPredicted RBP11.46□□□□□ -0.57
PVT1-207ENST00000518528 GNRH1P01148 92 aa11.46□□□□□ -0.57
PVT1-207ENST00000518528 GTF2A2P52657 109 aa11.46□□□□□ -0.57
PVT1-207ENST00000518528 PRMT2P55345 433 aa11.46□□□□□ -0.57
PVT1-207ENST00000518528 NEXNQ0ZGT2 675 aa11.46□□□□□ -0.57
PVT1-207ENST00000518528 TTLL11Q8NHH1 800 aa11.46□□□□□ -0.57
PVT1-207ENST00000518528 NKX2-3Q8TAU0 364 aa11.46□□□□□ -0.57
PVT1-207ENST00000518528 OPTNQ96CV9 577 aa11.46□□□□□ -0.57
PVT1-207ENST00000518528 HTATIP2Q9BUP3 242 aa11.46□□□□□ -0.57
PVT1-207ENST00000518528 NR2E3Q9Y5X4 410 aa11.46□□□□□ -0.57
PVT1-207ENST00000518528 CLRN2A0PK11 232 aa11.45□□□□□ -0.58
PVT1-207ENST00000518528 SPDYE2BA6NHP3 402 aa11.45□□□□□ -0.58
PVT1-207ENST00000518528 WTIPA6NIX2 430 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms