RNA–Protein interactions for RNA: ENST00000518265.5

SRGAP3-211, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 1,799 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-211ENST00000518265 CACNA1SQ13698 1873 aa9.97□□□□□ -0.81
SRGAP3-211ENST00000518265 PLSCR1O15162 318 aa9.96□□□□□ -0.81
SRGAP3-211ENST00000518265 CAMTA2O94983 1202 aa9.96□□□□□ -0.81
SRGAP3-211ENST00000518265 LMOD1P29536 600 aaPredicted RBP9.96□□□□□ -0.81
SRGAP3-211ENST00000518265 TUSC1Q2TAM9 212 aa9.96□□□□□ -0.81
SRGAP3-211ENST00000518265 TYW1BQ6NUM6 668 aa9.96□□□□□ -0.81
SRGAP3-211ENST00000518265 CCDC24Q8N4L8 307 aa9.96□□□□□ -0.81
SRGAP3-211ENST00000518265 UCN2Q96RP3 112 aa9.96□□□□□ -0.81
SRGAP3-211ENST00000518265 CAMKK2Q96RR4 588 aa9.96□□□□□ -0.81
SRGAP3-211ENST00000518265 VRTNQ9H8Y1 702 aa9.96□□□□□ -0.81
SRGAP3-211ENST00000518265 RTCBQ9Y3I0 505 aaKnown RBP9.96□□□□□ -0.81
SRGAP3-211ENST00000518265 ATP10DQ9P241 1426 aa9.96□□□□□ -0.81
SRGAP3-211ENST00000518265 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.96□□□□□ -0.82
SRGAP3-211ENST00000518265 RPS6KA4O75676 772 aa9.96□□□□□ -0.82
SRGAP3-211ENST00000518265 CD46P15529 392 aa9.96□□□□□ -0.82
SRGAP3-211ENST00000518265 NEXNQ0ZGT2 675 aa9.96□□□□□ -0.82
SRGAP3-211ENST00000518265 ILDR2Q71H61 639 aa9.96□□□□□ -0.82
SRGAP3-211ENST00000518265 SIRT2Q8IXJ6 389 aa9.96□□□□□ -0.82
SRGAP3-211ENST00000518265 TTC13Q8NBP0 860 aa9.96□□□□□ -0.82
SRGAP3-211ENST00000518265 PDGFDQ9GZP0 370 aaPredicted RBP9.96□□□□□ -0.82
SRGAP3-211ENST00000518265 PRDM16Q9HAZ2 1276 aa9.96□□□□□ -0.82
SRGAP3-211ENST00000518265 C9orf78Q9NZ63 289 aaPredicted RBP9.96□□□□□ -0.82
SRGAP3-211ENST00000518265 UBN2Q6ZU65 1347 aa9.95□□□□□ -0.82
SRGAP3-211ENST00000518265 GTF2E1P29083 439 aaPredicted RBP9.95□□□□□ -0.82
SRGAP3-211ENST00000518265 SF3B2Q13435 895 aaKnown RBP9.95□□□□□ -0.82
SRGAP3-211ENST00000518265 TCIRG1Q13488 830 aa9.95□□□□□ -0.82
SRGAP3-211ENST00000518265 GCKRQ14397 625 aa9.95□□□□□ -0.82
SRGAP3-211ENST00000518265 SLC27A3Q5K4L6 730 aa9.95□□□□□ -0.82
SRGAP3-211ENST00000518265 UBE3BQ7Z3V4 1068 aa9.95□□□□□ -0.82
SRGAP3-211ENST00000518265 LINS1Q8NG48 757 aa9.95□□□□□ -0.82
SRGAP3-211ENST00000518265 SUCLG2Q96I99 432 aa9.95□□□□□ -0.82
SRGAP3-211ENST00000518265 CCDC85AQ96PX6 553 aaPredicted RBP9.95□□□□□ -0.82
SRGAP3-211ENST00000518265 BCL2L12Q9HB09 334 aa9.95□□□□□ -0.82
SRGAP3-211ENST00000518265 TFCP2L1Q9NZI6 479 aa9.95□□□□□ -0.82
SRGAP3-211ENST00000518265 KCNG1Q9UIX4 513 aa9.95□□□□□ -0.82
SRGAP3-211ENST00000518265 NDUFB9Q9Y6M9 179 aa9.95□□□□□ -0.82
SRGAP3-211ENST00000518265 A0A087WZG4 1122 aa9.94□□□□□ -0.82
SRGAP3-211ENST00000518265 UBTFL1P0CB47 393 aaPredicted RBP9.94□□□□□ -0.82
SRGAP3-211ENST00000518265 EPHA10Q5JZY3 1008 aa9.94□□□□□ -0.82
SRGAP3-211ENST00000518265 RC3H1Q5TC82 1133 aaKnown RBP9.94□□□□□ -0.82
SRGAP3-211ENST00000518265 TBC1D9BQ66K14 1250 aa9.94□□□□□ -0.82
SRGAP3-211ENST00000518265 FAM89AQ96GI7 184 aa9.94□□□□□ -0.82
SRGAP3-211ENST00000518265 COL24A1Q17RW2 1714 aa9.94□□□□□ -0.82
SRGAP3-211ENST00000518265 PNMA6EA0A0J9YXQ4 647 aa9.93□□□□□ -0.82
SRGAP3-211ENST00000518265 RFC4P35249 363 aa9.93□□□□□ -0.82
SRGAP3-211ENST00000518265 TRAPPC3LQ5T215 181 aa9.93□□□□□ -0.82
SRGAP3-211ENST00000518265 MSL1Q68DK7 614 aa9.93□□□□□ -0.82
SRGAP3-211ENST00000518265 NUTM1Q86Y26 1132 aa9.93□□□□□ -0.82
SRGAP3-211ENST00000518265 KAZALD1Q96I82 304 aa9.93□□□□□ -0.82
SRGAP3-211ENST00000518265 ISCA1Q9BUE6 129 aa9.93□□□□□ -0.82
SRGAP3-211ENST00000518265 COL4A1P02462 1669 aa9.93□□□□□ -0.82
SRGAP3-211ENST00000518265 QSER1Q2KHR3 1735 aa9.93□□□□□ -0.82
SRGAP3-211ENST00000518265 GRM8O00222 908 aa9.93□□□□□ -0.82
SRGAP3-211ENST00000518265 ZPR1O75312 459 aa9.93□□□□□ -0.82
SRGAP3-211ENST00000518265 BAG6P46379 1132 aa9.93□□□□□ -0.82
SRGAP3-211ENST00000518265 SUSD4Q5VX71 490 aa9.93□□□□□ -0.82
SRGAP3-211ENST00000518265 CEP85Q6P2H3 762 aa9.93□□□□□ -0.82
SRGAP3-211ENST00000518265 COL23A1Q86Y22 540 aaPredicted RBP9.93□□□□□ -0.82
SRGAP3-211ENST00000518265 TRIM34Q9BYJ4 488 aa9.93□□□□□ -0.82
SRGAP3-211ENST00000518265 BICC1Q9H694 974 aaKnown RBP9.93□□□□□ -0.82
SRGAP3-211ENST00000518265 CWC25Q9NXE8 425 aaPredicted RBP9.93□□□□□ -0.82
SRGAP3-211ENST00000518265 TFIP11Q9UBB9 837 aaKnown RBP9.93□□□□□ -0.82
SRGAP3-211ENST00000518265 NIP7Q9Y221 180 aaKnown RBP eCLIP9.93□□□□□ -0.82
SRGAP3-211ENST00000518265 TNRC6CQ9HCJ0 1690 aaKnown RBP9.92□□□□□ -0.82
SRGAP3-211ENST00000518265 ALDH1L1O75891 902 aa9.92□□□□□ -0.82
SRGAP3-211ENST00000518265 GNAI2P04899 355 aa9.92□□□□□ -0.82
SRGAP3-211ENST00000518265 MCCP23508 829 aa9.92□□□□□ -0.82
SRGAP3-211ENST00000518265 SETQ01105 290 aaPredicted RBP9.92□□□□□ -0.82
SRGAP3-211ENST00000518265 C6orf132Q5T0Z8 1188 aa9.92□□□□□ -0.82
SRGAP3-211ENST00000518265 NLRP10Q86W26 655 aa9.92□□□□□ -0.82
SRGAP3-211ENST00000518265 KLHDC4Q8TBB5 520 aa9.92□□□□□ -0.82
SRGAP3-211ENST00000518265 NARFQ9UHQ1 456 aa9.92□□□□□ -0.82
SRGAP3-211ENST00000518265 ANKRD31Q8N7Z5 1873 aa9.92□□□□□ -0.82
SRGAP3-211ENST00000518265 SRCAPQ6ZRS2 3230 aa9.91□□□□□ -0.82
SRGAP3-211ENST00000518265 ZNF34Q8IZ26 560 aa9.91□□□□□ -0.82
SRGAP3-211ENST00000518265 ALG2Q9H553 416 aa9.91□□□□□ -0.82
SRGAP3-211ENST00000518265 CWC22Q9HCG8 908 aaKnown RBP9.91□□□□□ -0.82
SRGAP3-211ENST00000518265 TRMT112Q9UI30 125 aaKnown RBP9.91□□□□□ -0.82
SRGAP3-211ENST00000518265 PNPLA7Q6ZV29 1317 aa9.91□□□□□ -0.82
SRGAP3-211ENST00000518265 USP42Q9H9J4 1324 aaKnown RBP9.91□□□□□ -0.82
SRGAP3-211ENST00000518265 RCCD1A6NED2 376 aa9.91□□□□□ -0.82
SRGAP3-211ENST00000518265 ERVV-1B6SEH8 477 aa9.91□□□□□ -0.82
SRGAP3-211ENST00000518265 GNAI3P08754 354 aa9.91□□□□□ -0.82
SRGAP3-211ENST00000518265 HCLS1P14317 486 aaPredicted RBP9.91□□□□□ -0.82
SRGAP3-211ENST00000518265 CASP7P55210 303 aa9.91□□□□□ -0.82
SRGAP3-211ENST00000518265 PA2G4Q9UQ80 394 aaKnown RBP9.91□□□□□ -0.82
SRGAP3-211ENST00000518265 CHMP3Q9Y3E7 222 aa9.91□□□□□ -0.82
SRGAP3-211ENST00000518265 DDX11L8A8MPP1 907 aa9.9□□□□□ -0.82
SRGAP3-211ENST00000518265 H7C1W4 665 aa9.9□□□□□ -0.82
SRGAP3-211ENST00000518265 GYS1P13807 737 aa9.9□□□□□ -0.82
SRGAP3-211ENST00000518265 PPP1R42Q7Z4L9 355 aa9.9□□□□□ -0.82
SRGAP3-211ENST00000518265 ANKRD44Q8N8A2 993 aa9.9□□□□□ -0.82
SRGAP3-211ENST00000518265 CCDC191Q8NCU4 936 aa9.9□□□□□ -0.82
SRGAP3-211ENST00000518265 FAM198AQ9UFP1 575 aa9.9□□□□□ -0.82
SRGAP3-211ENST00000518265 EXOC6BQ9Y2D4 811 aa9.9□□□□□ -0.82
SRGAP3-211ENST00000518265 KDM2BQ8NHM5 1336 aa9.9□□□□□ -0.82
SRGAP3-211ENST00000518265 SMARCA5O60264 1052 aaPredicted RBP9.89□□□□□ -0.83
SRGAP3-211ENST00000518265 PLCG2P16885 1265 aa9.89□□□□□ -0.83
SRGAP3-211ENST00000518265 UTRNP46939 3433 aa9.89□□□□□ -0.83
SRGAP3-211ENST00000518265 SLC15A2Q16348 729 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms