RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 USP17L2Q6R6M4 530 aa8.95□□□□□ -0.98
CPS1-210ENST00000518043 USP17L1Q7RTZ2 530 aa8.95□□□□□ -0.98
CPS1-210ENST00000518043 PLEKHM2Q8IWE5 1019 aa8.95□□□□□ -0.98
CPS1-210ENST00000518043 DEPDC4Q8N2C3 294 aa8.95□□□□□ -0.98
CPS1-210ENST00000518043 TSR2Q969E8 191 aaKnown RBP8.95□□□□□ -0.98
CPS1-210ENST00000518043 TMPRSS4Q9NRS4 437 aa8.95□□□□□ -0.98
CPS1-210ENST00000518043 RNF123Q5XPI4 1314 aa8.95□□□□□ -0.98
CPS1-210ENST00000518043 TNS2Q63HR2 1409 aa8.95□□□□□ -0.98
CPS1-210ENST00000518043 UBR2Q8IWV8 1755 aa8.94□□□□□ -0.98
CPS1-210ENST00000518043 ITGB4P16144 1822 aa8.94□□□□□ -0.98
CPS1-210ENST00000518043 GNAT3A8MTJ3 354 aa8.94□□□□□ -0.98
CPS1-210ENST00000518043 HTATSF1O43719 755 aaKnown RBP8.94□□□□□ -0.98
CPS1-210ENST00000518043 LZTS3O60299 673 aaPredicted RBP8.94□□□□□ -0.98
CPS1-210ENST00000518043 PHKG2P15735 406 aa8.94□□□□□ -0.98
CPS1-210ENST00000518043 TATP17735 454 aaPredicted RBP8.94□□□□□ -0.98
CPS1-210ENST00000518043 LMOD3Q0VAK6 560 aa8.94□□□□□ -0.98
CPS1-210ENST00000518043 NCOA4Q13772 614 aa8.94□□□□□ -0.98
CPS1-210ENST00000518043 AMOTQ4VCS5 1084 aa8.94□□□□□ -0.98
CPS1-210ENST00000518043 PLEKHO1Q53GL0 409 aaPredicted RBP8.94□□□□□ -0.98
CPS1-210ENST00000518043 OXLD1Q5BKU9 147 aa8.94□□□□□ -0.98
CPS1-210ENST00000518043 AKAP4Q5JQC9 854 aa8.94□□□□□ -0.98
CPS1-210ENST00000518043 RAPGEF4Q8WZA2 1011 aa8.94□□□□□ -0.98
CPS1-210ENST00000518043 C8orf37Q96NL8 207 aa8.94□□□□□ -0.98
CPS1-210ENST00000518043 DOT1LQ8TEK3 1739 aa8.94□□□□□ -0.98
CPS1-210ENST00000518043 CHL1O00533 1208 aa8.93□□□□□ -0.98
CPS1-210ENST00000518043 GFRA3O60609 400 aa8.93□□□□□ -0.98
CPS1-210ENST00000518043 NEFMP07197 916 aa8.93□□□□□ -0.98
CPS1-210ENST00000518043 IL2RBP14784 551 aa8.93□□□□□ -0.98
CPS1-210ENST00000518043 VPS72Q15906 364 aa8.93□□□□□ -0.98
CPS1-210ENST00000518043 EML3Q32P44 896 aa8.93□□□□□ -0.98
CPS1-210ENST00000518043 UNC5CLQ8IV45 518 aa8.93□□□□□ -0.98
CPS1-210ENST00000518043 ZNF784Q8NCA9 323 aaPredicted RBP8.93□□□□□ -0.98
CPS1-210ENST00000518043 LGR6Q9HBX8 967 aa8.93□□□□□ -0.98
CPS1-210ENST00000518043 MBIPQ9NS73 344 aa8.93□□□□□ -0.98
CPS1-210ENST00000518043 IFT57Q9NWB7 429 aa8.93□□□□□ -0.98
CPS1-210ENST00000518043 C5P01031 1676 aa8.92□□□□□ -0.98
CPS1-210ENST00000518043 AFF2P51816 1311 aa8.92□□□□□ -0.98
CPS1-210ENST00000518043 RNMTO43148 476 aaKnown RBP8.92□□□□□ -0.98
CPS1-210ENST00000518043 EVA1CP58658 441 aa8.92□□□□□ -0.98
CPS1-210ENST00000518043 HPS1Q92902 700 aa8.92□□□□□ -0.98
CPS1-210ENST00000518043 PGPEP1Q9NXJ5 209 aa8.92□□□□□ -0.98
CPS1-210ENST00000518043 PCDH11XQ9BZA7 1347 aa8.91□□□□□ -0.98
CPS1-210ENST00000518043 PCDH11YQ9BZA8 1340 aa8.91□□□□□ -0.98
CPS1-210ENST00000518043 SCTRP47872 440 aa8.91□□□□□ -0.98
CPS1-210ENST00000518043 ERVK-9P63128 1117 aa8.91□□□□□ -0.98
CPS1-210ENST00000518043 EXOSC9Q06265 439 aaKnown RBP8.91□□□□□ -0.98
CPS1-210ENST00000518043 USP4Q13107 963 aa8.91□□□□□ -0.98
CPS1-210ENST00000518043 CC2D2BQ6DHV5 1058 aa8.91□□□□□ -0.98
CPS1-210ENST00000518043 MPRIPQ6WCQ1 1025 aa8.91□□□□□ -0.98
CPS1-210ENST00000518043 FBXO41Q8TF61 875 aa8.91□□□□□ -0.98
CPS1-210ENST00000518043 NGLY1Q96IV0 654 aa8.91□□□□□ -0.98
CPS1-210ENST00000518043 KLF16Q9BXK1 252 aaPredicted RBP8.91□□□□□ -0.98
CPS1-210ENST00000518043 CYLDQ9NQC7 956 aa8.91□□□□□ -0.98
CPS1-210ENST00000518043 USP35Q9P2H5 1018 aa8.91□□□□□ -0.98
CPS1-210ENST00000518043 BRWD3Q6RI45 1802 aa8.9□□□□□ -0.98
CPS1-210ENST00000518043 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.9□□□□□ -0.98
CPS1-210ENST00000518043 FAM187AA6NFU0 413 aa8.9□□□□□ -0.98
CPS1-210ENST00000518043 NRG2O14511 850 aaPredicted RBP8.9□□□□□ -0.98
CPS1-210ENST00000518043 LILRA1O75019 489 aa8.9□□□□□ -0.98
CPS1-210ENST00000518043 WDR4P57081 412 aaKnown RBP8.9□□□□□ -0.98
CPS1-210ENST00000518043 GNAI1P63096 354 aa8.9□□□□□ -0.98
CPS1-210ENST00000518043 MYT1Q01538 1121 aa8.9□□□□□ -0.98
CPS1-210ENST00000518043 KRT24Q2M2I5 525 aa8.9□□□□□ -0.98
CPS1-210ENST00000518043 TSPYL6Q8N831 410 aa8.9□□□□□ -0.98
CPS1-210ENST00000518043 ZCRB1Q8TBF4 217 aaKnown RBP8.9□□□□□ -0.98
CPS1-210ENST00000518043 ITPKCQ96DU7 683 aa8.9□□□□□ -0.98
CPS1-210ENST00000518043 MYH16Q9H6N6 1097 aa8.9□□□□□ -0.98
CPS1-210ENST00000518043 MKRN1Q9UHC7 482 aaKnown RBP8.9□□□□□ -0.98
CPS1-210ENST00000518043 SPG7Q9UQ90 795 aa8.9□□□□□ -0.98
CPS1-210ENST00000518043 THRAP3Q9Y2W1 955 aaKnown RBP8.9□□□□□ -0.98
CPS1-210ENST00000518043 KCPQ6ZWJ8 1503 aa8.9□□□□□ -0.99
CPS1-210ENST00000518043 HEG1Q9ULI3 1381 aa8.89□□□□□ -0.99
CPS1-210ENST00000518043 KCNQ3O43525 872 aa8.89□□□□□ -0.99
CPS1-210ENST00000518043 ZIC2O95409 532 aaPredicted RBP8.89□□□□□ -0.99
CPS1-210ENST00000518043 MYCP01106 439 aaPredicted RBP8.89□□□□□ -0.99
CPS1-210ENST00000518043 TIMP2P16035 220 aa8.89□□□□□ -0.99
CPS1-210ENST00000518043 CALD1Q05682 793 aaKnown RBP8.89□□□□□ -0.99
CPS1-210ENST00000518043 IFNL2Q8IZJ0 200 aa8.89□□□□□ -0.99
CPS1-210ENST00000518043 C8orf58Q8NAV2 365 aa8.89□□□□□ -0.99
CPS1-210ENST00000518043 PBXIP1Q96AQ6 731 aa8.89□□□□□ -0.99
CPS1-210ENST00000518043 ZFAND3Q9H8U3 227 aa8.89□□□□□ -0.99
CPS1-210ENST00000518043 VRTNQ9H8Y1 702 aa8.89□□□□□ -0.99
CPS1-210ENST00000518043 MIS18AQ9NYP9 233 aa8.89□□□□□ -0.99
CPS1-210ENST00000518043 USP21Q9UK80 565 aa8.89□□□□□ -0.99
CPS1-210ENST00000518043 RCAN3Q9UKA8 241 aa8.89□□□□□ -0.99
CPS1-210ENST00000518043 NOD1Q9Y239 953 aa8.89□□□□□ -0.99
CPS1-210ENST00000518043 SUPT16HQ9Y5B9 1047 aaKnown RBP8.89□□□□□ -0.99
CPS1-210ENST00000518043 SBF2Q86WG5 1849 aa8.89□□□□□ -0.99
CPS1-210ENST00000518043 LAMB4A4D0S4 1761 aa8.89□□□□□ -0.99
CPS1-210ENST00000518043 C1orf141Q5JVX7 400 aa8.88□□□□□ -0.99
CPS1-210ENST00000518043 RTF1Q92541 710 aaKnown RBP8.88□□□□□ -0.99
CPS1-210ENST00000518043 DCAF5Q96JK2 942 aa8.88□□□□□ -0.99
CPS1-210ENST00000518043 BABAM1Q9NWV8 329 aa8.88□□□□□ -0.99
CPS1-210ENST00000518043 CICQ96RK0 1608 aaPredicted RBP8.87□□□□□ -0.99
CPS1-210ENST00000518043 ATP5J2-PTCD1G3V325 749 aa8.87□□□□□ -0.99
CPS1-210ENST00000518043 VAMP4O75379 141 aa8.87□□□□□ -0.99
CPS1-210ENST00000518043 ADD1P35611 737 aaKnown RBP8.87□□□□□ -0.99
CPS1-210ENST00000518043 RARSP54136 660 aaKnown RBP8.87□□□□□ -0.99
CPS1-210ENST00000518043 LAPTM4AQ15012 233 aa8.87□□□□□ -0.99
CPS1-210ENST00000518043 TAF7Q15545 349 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms