RNA–Protein interactions for RNA: ENST00000518018.1

TRPS1-207, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2

Gene TRPS1, Length 813 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-207ENST00000518018 NOP53Q9NZM5 478 aaKnown RBP6.97□□□□□ -1.29
TRPS1-207ENST00000518018 FAM229AH3BQW9 127 aa6.96□□□□□ -1.3
TRPS1-207ENST00000518018 NFKBIEO00221 500 aa6.96□□□□□ -1.3
TRPS1-207ENST00000518018 EIF1AYO14602 144 aaKnown RBP6.96□□□□□ -1.3
TRPS1-207ENST00000518018 TREHO43280 583 aa6.96□□□□□ -1.3
TRPS1-207ENST00000518018 CPNE3O75131 537 aaKnown RBP6.96□□□□□ -1.3
TRPS1-207ENST00000518018 SMNDC1O75940 238 aaKnown RBP eCLIP6.96□□□□□ -1.3
TRPS1-207ENST00000518018 NEFLP07196 543 aa6.96□□□□□ -1.3
TRPS1-207ENST00000518018 BAG6P46379 1132 aa6.96□□□□□ -1.3
TRPS1-207ENST00000518018 DSC3Q14574 896 aa6.96□□□□□ -1.3
TRPS1-207ENST00000518018 ILDR2Q71H61 639 aa6.96□□□□□ -1.3
TRPS1-207ENST00000518018 ZSCAN29Q8IWY8 852 aaPredicted RBP6.96□□□□□ -1.3
TRPS1-207ENST00000518018 POP1Q99575 1024 aaKnown RBP6.96□□□□□ -1.3
TRPS1-207ENST00000518018 OSMRQ99650 979 aa6.96□□□□□ -1.3
TRPS1-207ENST00000518018 ZKSCAN3Q9BRR0 538 aa6.96□□□□□ -1.3
TRPS1-207ENST00000518018 LACRTQ9GZZ8 138 aa6.96□□□□□ -1.3
TRPS1-207ENST00000518018 HSP90B1P14625 803 aaKnown RBP6.95□□□□□ -1.3
TRPS1-207ENST00000518018 WFDC8Q8IUA0 241 aa6.95□□□□□ -1.3
TRPS1-207ENST00000518018 GALNT12Q8IXK2 581 aa6.95□□□□□ -1.3
TRPS1-207ENST00000518018 IL22RA1Q8N6P7 574 aa6.95□□□□□ -1.3
TRPS1-207ENST00000518018 DCAF5Q96JK2 942 aa6.95□□□□□ -1.3
TRPS1-207ENST00000518018 CSRNP1Q96S65 589 aa6.95□□□□□ -1.3
TRPS1-207ENST00000518018 TTBK1Q5TCY1 1321 aaPredicted RBP6.95□□□□□ -1.3
TRPS1-207ENST00000518018 A0A0A0MRY4 1105 aa6.94□□□□□ -1.3
TRPS1-207ENST00000518018 SPDYE3A6NKU9 549 aa6.94□□□□□ -1.3
TRPS1-207ENST00000518018 PDE2AO00408 941 aaPredicted RBP6.94□□□□□ -1.3
TRPS1-207ENST00000518018 GDF11O95390 407 aa6.94□□□□□ -1.3
TRPS1-207ENST00000518018 PLCB3Q01970 1234 aa6.94□□□□□ -1.3
TRPS1-207ENST00000518018 DNAJC25Q9H1X3 360 aa6.94□□□□□ -1.3
TRPS1-207ENST00000518018 NPHS2Q9NP85 383 aa6.94□□□□□ -1.3
TRPS1-207ENST00000518018 TMEM151AQ8N4L1 468 aa6.93□□□□□ -1.3
TRPS1-207ENST00000518018 CCDC74AQ96AQ1 378 aa6.93□□□□□ -1.3
TRPS1-207ENST00000518018 PUS7Q96PZ0 661 aaKnown RBP6.93□□□□□ -1.3
TRPS1-207ENST00000518018 SH2B1Q9NRF2 756 aaPredicted RBP6.93□□□□□ -1.3
TRPS1-207ENST00000518018 PNMA6FA0A0J9YX94 578 aa6.92□□□□□ -1.3
TRPS1-207ENST00000518018 A0A1W2PP55 124 aa6.92□□□□□ -1.3
TRPS1-207ENST00000518018 KRBA1A5PL33 1030 aa6.92□□□□□ -1.3
TRPS1-207ENST00000518018 PTPRAP18433 802 aa6.92□□□□□ -1.3
TRPS1-207ENST00000518018 CDK11BP21127 795 aaKnown RBP6.92□□□□□ -1.3
TRPS1-207ENST00000518018 MAPK8P45983 427 aa6.92□□□□□ -1.3
TRPS1-207ENST00000518018 FMR1Q06787 632 aaKnown RBP eCLIP6.92□□□□□ -1.3
TRPS1-207ENST00000518018 TRIM28Q13263 835 aaKnown RBP6.92□□□□□ -1.3
TRPS1-207ENST00000518018 PRRT3Q5FWE3 981 aa6.92□□□□□ -1.3
TRPS1-207ENST00000518018 TMEM102Q8N9M5 508 aaPredicted RBP6.92□□□□□ -1.3
TRPS1-207ENST00000518018 NXPE3Q969Y0 559 aa6.92□□□□□ -1.3
TRPS1-207ENST00000518018 CDK11AQ9UQ88 783 aaPredicted RBP6.92□□□□□ -1.3
TRPS1-207ENST00000518018 ANKRD33BA6NCL7 494 aa6.91□□□□□ -1.3
TRPS1-207ENST00000518018 SPATA31C1P0DKV0 1188 aa6.91□□□□□ -1.3
TRPS1-207ENST00000518018 EPHA1P21709 976 aa6.91□□□□□ -1.3
TRPS1-207ENST00000518018 CDC27P30260 824 aa6.91□□□□□ -1.3
TRPS1-207ENST00000518018 CDC25BP30305 580 aa6.91□□□□□ -1.3
TRPS1-207ENST00000518018 ENOX2Q16206 610 aaKnown RBP6.91□□□□□ -1.3
TRPS1-207ENST00000518018 TXNDC11Q6PKC3 985 aa6.91□□□□□ -1.3
TRPS1-207ENST00000518018 DNAJC14Q6Y2X3 702 aaPredicted RBP6.91□□□□□ -1.3
TRPS1-207ENST00000518018 ALYREFQ86V81 257 aaKnown RBP6.91□□□□□ -1.3
TRPS1-207ENST00000518018 FMR1NBQ8N0W7 255 aaPredicted RBP6.91□□□□□ -1.3
TRPS1-207ENST00000518018 EPS8L3Q8TE67 593 aaKnown RBP6.91□□□□□ -1.3
TRPS1-207ENST00000518018 PPME1Q9Y570 386 aa6.91□□□□□ -1.3
TRPS1-207ENST00000518018 METTL12A8MUP2 240 aa6.9□□□□□ -1.3
TRPS1-207ENST00000518018 LINC01387J3KSC0 135 aa6.9□□□□□ -1.3
TRPS1-207ENST00000518018 DEAF1O75398 565 aaPredicted RBP6.9□□□□□ -1.3
TRPS1-207ENST00000518018 P4HBP07237 508 aaKnown RBP6.9□□□□□ -1.3
TRPS1-207ENST00000518018 RAC1P63000 192 aa6.9□□□□□ -1.3
TRPS1-207ENST00000518018 GRIK4Q16099 956 aa6.9□□□□□ -1.3
TRPS1-207ENST00000518018 CCDC27Q2M243 656 aa6.9□□□□□ -1.3
TRPS1-207ENST00000518018 PI16Q6UXB8 463 aa6.9□□□□□ -1.3
TRPS1-207ENST00000518018 CACTIN-AS1Q8N1I8 211 aa6.9□□□□□ -1.3
TRPS1-207ENST00000518018 ASAP3Q8TDY4 903 aa6.9□□□□□ -1.3
TRPS1-207ENST00000518018 SETDB2Q96T68 719 aa6.9□□□□□ -1.3
TRPS1-207ENST00000518018 BHLHE41Q9C0J9 482 aaPredicted RBP6.9□□□□□ -1.3
TRPS1-207ENST00000518018 ADAM19Q9H013 955 aa6.9□□□□□ -1.3
TRPS1-207ENST00000518018 ELNP15502 786 aa6.89□□□□□ -1.31
TRPS1-207ENST00000518018 KIAA0319Q5VV43 1072 aa6.89□□□□□ -1.31
TRPS1-207ENST00000518018 CCNJLQ8IV13 435 aa6.89□□□□□ -1.31
TRPS1-207ENST00000518018 DTWD1Q8N5C7 304 aa6.89□□□□□ -1.31
TRPS1-207ENST00000518018 TCF12Q99081 682 aa6.89□□□□□ -1.31
TRPS1-207ENST00000518018 MUC3BQ9H195 1237 aa6.89□□□□□ -1.31
TRPS1-207ENST00000518018 EHD4Q9H223 541 aa6.89□□□□□ -1.31
TRPS1-207ENST00000518018 LIN7BQ9HAP6 207 aa6.89□□□□□ -1.31
TRPS1-207ENST00000518018 WWC3Q9ULE0 1092 aa6.89□□□□□ -1.31
TRPS1-207ENST00000518018 SOX13Q9UN79 622 aa6.89□□□□□ -1.31
TRPS1-207ENST00000518018 FAM177BA6PVY3 158 aa6.88□□□□□ -1.31
TRPS1-207ENST00000518018 GADD45BO75293 160 aaPredicted RBP6.88□□□□□ -1.31
TRPS1-207ENST00000518018 ITGB2P05107 769 aa6.88□□□□□ -1.31
TRPS1-207ENST00000518018 GRIA4P48058 902 aa6.88□□□□□ -1.31
TRPS1-207ENST00000518018 SETDB1Q15047 1291 aa6.88□□□□□ -1.31
TRPS1-207ENST00000518018 SHISA2Q6UWI4 295 aa6.88□□□□□ -1.31
TRPS1-207ENST00000518018 FBXO11Q86XK2 927 aa6.88□□□□□ -1.31
TRPS1-207ENST00000518018 BSNDQ8WZ55 320 aa6.88□□□□□ -1.31
TRPS1-207ENST00000518018 CHRNA4P43681 627 aa6.87□□□□□ -1.31
TRPS1-207ENST00000518018 GRM2Q14416 872 aa6.87□□□□□ -1.31
TRPS1-207ENST00000518018 SPRED3Q2MJR0 410 aa6.87□□□□□ -1.31
TRPS1-207ENST00000518018 PLA2G4EQ3MJ16 856 aa6.87□□□□□ -1.31
TRPS1-207ENST00000518018 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.87□□□□□ -1.31
TRPS1-207ENST00000518018 VN1R5Q7Z5H4 357 aa6.87□□□□□ -1.31
TRPS1-207ENST00000518018 CD163Q86VB7 1156 aa6.87□□□□□ -1.31
TRPS1-207ENST00000518018 NPAS4Q8IUM7 802 aa6.87□□□□□ -1.31
TRPS1-207ENST00000518018 GALNT11Q8NCW6 608 aa6.87□□□□□ -1.31
TRPS1-207ENST00000518018 CARD10Q9BWT7 1032 aa6.87□□□□□ -1.31
TRPS1-207ENST00000518018 NLRP2Q9NX02 1062 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms