RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 CDCA7Q9BWT1 371 aaPredicted RBP5.26□□□□□ -1.57
CPNE3-204ENST00000517862 MTMR10Q9NXD2 777 aa5.26□□□□□ -1.57
CPNE3-204ENST00000517862 NSFL1CQ9UNZ2 370 aaKnown RBP5.26□□□□□ -1.57
CPNE3-204ENST00000517862 SBNO1A3KN83 1393 aa5.26□□□□□ -1.57
CPNE3-204ENST00000517862 KIAA0232Q92628 1395 aa5.26□□□□□ -1.57
CPNE3-204ENST00000517862 PRUNE2Q8WUY3 3088 aa5.26□□□□□ -1.57
CPNE3-204ENST00000517862 BTAF1O14981 1849 aa5.25□□□□□ -1.57
CPNE3-204ENST00000517862 EEA1Q15075 1411 aa5.25□□□□□ -1.57
CPNE3-204ENST00000517862 A6NJR5 290 aa5.25□□□□□ -1.57
CPNE3-204ENST00000517862 PKN2Q16513 984 aaKnown RBP5.25□□□□□ -1.57
CPNE3-204ENST00000517862 SH3D19Q5HYK7 790 aa5.25□□□□□ -1.57
CPNE3-204ENST00000517862 PRSS36Q5K4E3 855 aa5.25□□□□□ -1.57
CPNE3-204ENST00000517862 SLC27A3Q5K4L6 730 aa5.25□□□□□ -1.57
CPNE3-204ENST00000517862 NKAPLQ5M9Q1 402 aa5.25□□□□□ -1.57
CPNE3-204ENST00000517862 CIAPIN1Q6FI81 312 aa5.25□□□□□ -1.57
CPNE3-204ENST00000517862 PROCA1Q8NCQ7 364 aaPredicted RBP5.25□□□□□ -1.57
CPNE3-204ENST00000517862 CCDC18Q5T9S5 1454 aa5.25□□□□□ -1.57
CPNE3-204ENST00000517862 CDC42BPGQ6DT37 1551 aa5.25□□□□□ -1.57
CPNE3-204ENST00000517862 NHSQ6T4R5 1651 aa5.24□□□□□ -1.57
CPNE3-204ENST00000517862 PAPPA2Q9BXP8 1791 aa5.24□□□□□ -1.57
CPNE3-204ENST00000517862 BRCA1P38398 1863 aaKnown RBP5.24□□□□□ -1.57
CPNE3-204ENST00000517862 NCOR1O75376 2440 aa5.24□□□□□ -1.57
CPNE3-204ENST00000517862 TRPM1Q7Z4N2 1603 aa5.24□□□□□ -1.57
CPNE3-204ENST00000517862 TIAM2Q8IVF5 1701 aa5.24□□□□□ -1.57
CPNE3-204ENST00000517862 KIAA1551Q9HCM1 1747 aa5.24□□□□□ -1.57
CPNE3-204ENST00000517862 PDIA4P13667 645 aaKnown RBP5.24□□□□□ -1.57
CPNE3-204ENST00000517862 KCNQ4P56696 695 aa5.24□□□□□ -1.57
CPNE3-204ENST00000517862 NPM2Q86SE8 214 aaKnown RBP5.24□□□□□ -1.57
CPNE3-204ENST00000517862 METTL3Q86U44 580 aaKnown RBP5.24□□□□□ -1.57
CPNE3-204ENST00000517862 SUV39H2Q9H5I1 410 aa5.24□□□□□ -1.57
CPNE3-204ENST00000517862 GPCPD1Q9NPB8 672 aa5.24□□□□□ -1.57
CPNE3-204ENST00000517862 POLR3EQ9NVU0 708 aa5.24□□□□□ -1.57
CPNE3-204ENST00000517862 NOP53Q9NZM5 478 aaKnown RBP5.24□□□□□ -1.57
CPNE3-204ENST00000517862 ROBO2Q9HCK4 1378 aa5.24□□□□□ -1.57
CPNE3-204ENST00000517862 EPG5Q9HCE0 2579 aa5.24□□□□□ -1.57
CPNE3-204ENST00000517862 PRXQ9BXM0 1461 aa5.24□□□□□ -1.57
CPNE3-204ENST00000517862 CCDC88AQ3V6T2 1871 aa5.24□□□□□ -1.57
CPNE3-204ENST00000517862 NR3C2P08235 984 aa5.23□□□□□ -1.57
CPNE3-204ENST00000517862 SSTR3P32745 418 aaPredicted RBP5.23□□□□□ -1.57
CPNE3-204ENST00000517862 CLCN1P35523 988 aa5.23□□□□□ -1.57
CPNE3-204ENST00000517862 TGFB2P61812 414 aa5.23□□□□□ -1.57
CPNE3-204ENST00000517862 SULF1Q8IWU6 871 aa5.23□□□□□ -1.57
CPNE3-204ENST00000517862 ACSBG1Q96GR2 724 aa5.23□□□□□ -1.57
CPNE3-204ENST00000517862 CDK15Q96Q40 435 aa5.23□□□□□ -1.57
CPNE3-204ENST00000517862 MAST4O15021 2626 aa5.23□□□□□ -1.57
CPNE3-204ENST00000517862 RPTORQ8N122 1335 aa5.23□□□□□ -1.57
CPNE3-204ENST00000517862 KMT2BQ9UMN6 2715 aaPredicted RBP5.22□□□□□ -1.57
CPNE3-204ENST00000517862 GNB5O14775 395 aa5.22□□□□□ -1.57
CPNE3-204ENST00000517862 ACAP1Q15027 740 aa5.22□□□□□ -1.57
CPNE3-204ENST00000517862 ZNF511Q8NB15 262 aa5.22□□□□□ -1.57
CPNE3-204ENST00000517862 BAP1Q92560 729 aa5.22□□□□□ -1.57
CPNE3-204ENST00000517862 C1QTNF1Q9BXJ1 281 aa5.22□□□□□ -1.57
CPNE3-204ENST00000517862 RNF114Q9Y508 228 aa5.22□□□□□ -1.57
CPNE3-204ENST00000517862 KIF13BQ9NQT8 1826 aa5.22□□□□□ -1.57
CPNE3-204ENST00000517862 FASNP49327 2511 aaKnown RBP5.22□□□□□ -1.57
CPNE3-204ENST00000517862 KIF7Q2M1P5 1343 aa5.22□□□□□ -1.57
CPNE3-204ENST00000517862 QRICH2Q9H0J4 1663 aa5.21□□□□□ -1.57
CPNE3-204ENST00000517862 CCDC141Q6ZP82 1450 aa5.21□□□□□ -1.58
CPNE3-204ENST00000517862 A0A1W2PPC1 479 aa5.21□□□□□ -1.58
CPNE3-204ENST00000517862 DPEP1P16444 411 aa5.21□□□□□ -1.58
CPNE3-204ENST00000517862 LMNB1P20700 586 aa5.21□□□□□ -1.58
CPNE3-204ENST00000517862 JAG1P78504 1218 aa5.21□□□□□ -1.58
CPNE3-204ENST00000517862 SKIV2LQ15477 1246 aaKnown RBP5.21□□□□□ -1.58
CPNE3-204ENST00000517862 AKAP4Q5JQC9 854 aa5.21□□□□□ -1.58
CPNE3-204ENST00000517862 SMIM5Q71RC9 77 aa5.21□□□□□ -1.58
CPNE3-204ENST00000517862 PRO3102Q9H379 93 aa5.21□□□□□ -1.58
CPNE3-204ENST00000517862 FAM217BQ9NTX9 383 aaPredicted RBP5.21□□□□□ -1.58
CPNE3-204ENST00000517862 RBBP6Q7Z6E9 1792 aaKnown RBP5.21□□□□□ -1.58
CPNE3-204ENST00000517862 CCNB3Q8WWL7 1395 aa5.2□□□□□ -1.58
CPNE3-204ENST00000517862 ZBTB7CA1YPR0 619 aa5.2□□□□□ -1.58
CPNE3-204ENST00000517862 EN2P19622 333 aaPredicted RBP5.2□□□□□ -1.58
CPNE3-204ENST00000517862 ZC3H6P61129 1189 aaKnown RBP5.2□□□□□ -1.58
CPNE3-204ENST00000517862 EAPPQ56P03 285 aaPredicted RBP5.2□□□□□ -1.58
CPNE3-204ENST00000517862 MYSM1Q5VVJ2 828 aa5.2□□□□□ -1.58
CPNE3-204ENST00000517862 CNTROBQ8N137 903 aa5.2□□□□□ -1.58
CPNE3-204ENST00000517862 CCER1Q8TC90 406 aaPredicted RBP5.2□□□□□ -1.58
CPNE3-204ENST00000517862 UNC93B1Q9H1C4 597 aa5.2□□□□□ -1.58
CPNE3-204ENST00000517862 GPR179Q6PRD1 2367 aa5.2□□□□□ -1.58
CPNE3-204ENST00000517862 CRYBG1Q9Y4K1 1723 aa5.2□□□□□ -1.58
CPNE3-204ENST00000517862 CLTCL1P53675 1640 aa5.19□□□□□ -1.58
CPNE3-204ENST00000517862 SPTBN4Q9H254 2564 aa5.19□□□□□ -1.58
CPNE3-204ENST00000517862 RGPD8O14715 1765 aaPredicted RBP5.19□□□□□ -1.58
CPNE3-204ENST00000517862 GPR25O00155 361 aa5.19□□□□□ -1.58
CPNE3-204ENST00000517862 SPINT1O43278 529 aa5.19□□□□□ -1.58
CPNE3-204ENST00000517862 DALRD3Q5D0E6 543 aaKnown RBP5.19□□□□□ -1.58
CPNE3-204ENST00000517862 CCDC97Q96F63 343 aaPredicted RBP5.19□□□□□ -1.58
CPNE3-204ENST00000517862 GMCL1Q96IK5 515 aa5.19□□□□□ -1.58
CPNE3-204ENST00000517862 OXCT2Q9BYC2 517 aaPredicted RBP5.19□□□□□ -1.58
CPNE3-204ENST00000517862 DDX21Q9NR30 783 aaKnown RBP eCLIP5.19□□□□□ -1.58
CPNE3-204ENST00000517862 SNRKQ9NRH2 765 aa5.19□□□□□ -1.58
CPNE3-204ENST00000517862 HDAC9Q9UKV0 1011 aa5.19□□□□□ -1.58
CPNE3-204ENST00000517862 KDM6AO15550 1401 aaPredicted RBP5.19□□□□□ -1.58
CPNE3-204ENST00000517862 CHD6Q8TD26 2715 aa5.19□□□□□ -1.58
CPNE3-204ENST00000517862 ITSN1Q15811 1721 aa5.19□□□□□ -1.58
CPNE3-204ENST00000517862 AKAP11Q9UKA4 1901 aa5.19□□□□□ -1.58
CPNE3-204ENST00000517862 KANK1Q14678 1352 aa5.18□□□□□ -1.58
CPNE3-204ENST00000517862 ANKRD30BQ9BXX2 1392 aa5.18□□□□□ -1.58
CPNE3-204ENST00000517862 SHISA8B8ZZ34 492 aa5.18□□□□□ -1.58
CPNE3-204ENST00000517862 RAD21O60216 631 aa5.18□□□□□ -1.58
CPNE3-204ENST00000517862 CCNYL3P0C7X3 344 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms