RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 PCCAP05165 728 aaPredicted RBP11.73□□□□□ -0.53
LINCR-0001-201ENST00000517732 LAMB1P07942 1786 aa11.73□□□□□ -0.53
LINCR-0001-201ENST00000517732 MMP14P50281 582 aa11.73□□□□□ -0.53
LINCR-0001-201ENST00000517732 MKRN3Q13064 507 aaKnown RBP11.73□□□□□ -0.53
LINCR-0001-201ENST00000517732 RALBP1Q15311 655 aa11.73□□□□□ -0.53
LINCR-0001-201ENST00000517732 DUSP27Q5VZP5 1158 aa11.73□□□□□ -0.53
LINCR-0001-201ENST00000517732 CCDC191Q8NCU4 936 aa11.73□□□□□ -0.53
LINCR-0001-201ENST00000517732 GMLQ99445 158 aa11.73□□□□□ -0.53
LINCR-0001-201ENST00000517732 CDC5LQ99459 802 aaKnown RBP11.73□□□□□ -0.53
LINCR-0001-201ENST00000517732 MYD88Q99836 296 aa11.73□□□□□ -0.53
LINCR-0001-201ENST00000517732 MED23Q9ULK4 1368 aa11.73□□□□□ -0.53
LINCR-0001-201ENST00000517732 U3KPZ7 1027 aaPredicted RBP11.73□□□□□ -0.53
LINCR-0001-201ENST00000517732 C1QBPQ07021 282 aaKnown RBP11.72□□□□□ -0.53
LINCR-0001-201ENST00000517732 WDR43Q15061 677 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINCR-0001-201ENST00000517732 APOBEC3FQ8IUX4 373 aaKnown RBP11.72□□□□□ -0.53
LINCR-0001-201ENST00000517732 CCDC146Q8IYE0 955 aa11.72□□□□□ -0.53
LINCR-0001-201ENST00000517732 CCDC85AQ96PX6 553 aaPredicted RBP11.72□□□□□ -0.53
LINCR-0001-201ENST00000517732 CWC25Q9NXE8 425 aaPredicted RBP11.72□□□□□ -0.53
LINCR-0001-201ENST00000517732 DDX58O95786 925 aaKnown RBP11.71□□□□□ -0.53
LINCR-0001-201ENST00000517732 NBPF9Q3BBW0 867 aa11.71□□□□□ -0.53
LINCR-0001-201ENST00000517732 PRAMEF18Q5VWM3 479 aa11.71□□□□□ -0.53
LINCR-0001-201ENST00000517732 RUNDC1Q96C34 613 aa11.71□□□□□ -0.53
LINCR-0001-201ENST00000517732 CFHR5Q9BXR6 569 aa11.71□□□□□ -0.53
LINCR-0001-201ENST00000517732 CHMP4AQ9BY43 222 aa11.71□□□□□ -0.53
LINCR-0001-201ENST00000517732 SCAF8Q9UPN6 1271 aaKnown RBP11.71□□□□□ -0.53
LINCR-0001-201ENST00000517732 COL1A1P02452 1464 aaPredicted RBP11.7□□□□□ -0.54
LINCR-0001-201ENST00000517732 WNT10BO00744 389 aa11.7□□□□□ -0.54
LINCR-0001-201ENST00000517732 PRKG1Q13976 671 aa11.7□□□□□ -0.54
LINCR-0001-201ENST00000517732 STRIP1Q5VSL9 837 aa11.7□□□□□ -0.54
LINCR-0001-201ENST00000517732 INTS3Q68E01 1043 aaKnown RBP11.7□□□□□ -0.54
LINCR-0001-201ENST00000517732 MANSC4A6NHS7 340 aaPredicted RBP11.69□□□□□ -0.54
LINCR-0001-201ENST00000517732 SASH1O94885 1247 aa11.69□□□□□ -0.54
LINCR-0001-201ENST00000517732 INHBEP58166 350 aa11.69□□□□□ -0.54
LINCR-0001-201ENST00000517732 DACT2Q5SW24 774 aa11.69□□□□□ -0.54
LINCR-0001-201ENST00000517732 COA1Q9GZY4 146 aa11.69□□□□□ -0.54
LINCR-0001-201ENST00000517732 PHAXQ9H814 394 aaKnown RBP11.69□□□□□ -0.54
LINCR-0001-201ENST00000517732 ANGEL1Q9UNK9 670 aaKnown RBP11.69□□□□□ -0.54
LINCR-0001-201ENST00000517732 TRIM35Q9UPQ4 493 aa11.69□□□□□ -0.54
LINCR-0001-201ENST00000517732 TRIM17Q9Y577 477 aa11.69□□□□□ -0.54
LINCR-0001-201ENST00000517732 KIAA0100Q14667 2235 aaKnown RBP11.69□□□□□ -0.54
LINCR-0001-201ENST00000517732 CCT4P50991 539 aaKnown RBP11.68□□□□□ -0.54
LINCR-0001-201ENST00000517732 CTSWP56202 376 aa11.68□□□□□ -0.54
LINCR-0001-201ENST00000517732 CACNB1Q02641 598 aaPredicted RBP11.68□□□□□ -0.54
LINCR-0001-201ENST00000517732 PTPN12Q05209 780 aaKnown RBP11.68□□□□□ -0.54
LINCR-0001-201ENST00000517732 CALD1Q05682 793 aaKnown RBP11.68□□□□□ -0.54
LINCR-0001-201ENST00000517732 SPRYD7Q5W111 196 aa11.68□□□□□ -0.54
LINCR-0001-201ENST00000517732 OTUD7BQ6GQQ9 843 aa11.68□□□□□ -0.54
LINCR-0001-201ENST00000517732 ERO1AQ96HE7 468 aa11.68□□□□□ -0.54
LINCR-0001-201ENST00000517732 MBIPQ9NS73 344 aa11.68□□□□□ -0.54
LINCR-0001-201ENST00000517732 BSDC1Q9NW68 430 aaPredicted RBP11.68□□□□□ -0.54
LINCR-0001-201ENST00000517732 MYBBP1AQ9BQG0 1328 aaKnown RBP11.67□□□□□ -0.54
LINCR-0001-201ENST00000517732 PPP1R12BO60237 982 aaPredicted RBP11.67□□□□□ -0.54
LINCR-0001-201ENST00000517732 ZBTB48P10074 688 aaPredicted RBP11.67□□□□□ -0.54
LINCR-0001-201ENST00000517732 IGHMBP2P38935 993 aaKnown RBP11.67□□□□□ -0.54
LINCR-0001-201ENST00000517732 GNAI1P63096 354 aa11.67□□□□□ -0.54
LINCR-0001-201ENST00000517732 NEXNQ0ZGT2 675 aa11.67□□□□□ -0.54
LINCR-0001-201ENST00000517732 HABP4Q5JVS0 413 aaKnown RBP11.67□□□□□ -0.54
LINCR-0001-201ENST00000517732 JARID2Q92833 1246 aaPredicted RBP11.67□□□□□ -0.54
LINCR-0001-201ENST00000517732 SLC10A4Q96EP9 437 aa11.67□□□□□ -0.54
LINCR-0001-201ENST00000517732 METTL22Q9BUU2 404 aaPredicted RBP11.67□□□□□ -0.54
LINCR-0001-201ENST00000517732 MXD3Q9BW11 206 aa11.67□□□□□ -0.54
LINCR-0001-201ENST00000517732 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.67□□□□□ -0.54
LINCR-0001-201ENST00000517732 MINPP1Q9UNW1 487 aa11.67□□□□□ -0.54
LINCR-0001-201ENST00000517732 LEMD3Q9Y2U8 911 aa11.67□□□□□ -0.54
LINCR-0001-201ENST00000517732 CACNA1FO60840 1977 aa11.67□□□□□ -0.54
LINCR-0001-201ENST00000517732 KCNJ4P48050 445 aa11.66□□□□□ -0.54
LINCR-0001-201ENST00000517732 CCDC30Q5VVM6 783 aa11.66□□□□□ -0.54
LINCR-0001-201ENST00000517732 TTLL5Q6EMB2 1281 aa11.66□□□□□ -0.54
LINCR-0001-201ENST00000517732 IFNL1Q8IU54 200 aa11.66□□□□□ -0.54
LINCR-0001-201ENST00000517732 KIAA0825Q8IV33 1275 aa11.66□□□□□ -0.54
LINCR-0001-201ENST00000517732 ANKRD2Q9GZV1 360 aa11.66□□□□□ -0.54
LINCR-0001-201ENST00000517732 PPP2R3BQ9Y5P8 575 aa11.66□□□□□ -0.54
LINCR-0001-201ENST00000517732 A0A1B0GUL6 1792 aa11.65□□□□□ -0.54
LINCR-0001-201ENST00000517732 ELL2O00472 640 aaPredicted RBP11.65□□□□□ -0.54
LINCR-0001-201ENST00000517732 MYO1BO43795 1136 aa11.65□□□□□ -0.54
LINCR-0001-201ENST00000517732 DLGAP5Q15398 846 aa11.65□□□□□ -0.54
LINCR-0001-201ENST00000517732 LDLRAD1Q5T700 205 aa11.65□□□□□ -0.54
LINCR-0001-201ENST00000517732 OTOP1Q7RTM1 612 aa11.65□□□□□ -0.54
LINCR-0001-201ENST00000517732 TTLL11Q8NHH1 800 aa11.65□□□□□ -0.54
LINCR-0001-201ENST00000517732 GREM2Q9H772 168 aa11.65□□□□□ -0.54
LINCR-0001-201ENST00000517732 IFT57Q9NWB7 429 aa11.65□□□□□ -0.54
LINCR-0001-201ENST00000517732 MAP3K2Q9Y2U5 619 aa11.65□□□□□ -0.54
LINCR-0001-201ENST00000517732 OTOFQ9HC10 1997 aa11.65□□□□□ -0.55
LINCR-0001-201ENST00000517732 ZNF804BA4D1E1 1349 aa11.64□□□□□ -0.55
LINCR-0001-201ENST00000517732 UNCXA6NJT0 531 aa11.64□□□□□ -0.55
LINCR-0001-201ENST00000517732 GTF2IP78347 998 aa11.64□□□□□ -0.55
LINCR-0001-201ENST00000517732 SUPT20HL1Q3ZLR7 823 aa11.64□□□□□ -0.55
LINCR-0001-201ENST00000517732 WNK4Q96J92 1243 aa11.64□□□□□ -0.55
LINCR-0001-201ENST00000517732 MPHOSPH8Q99549 860 aa11.64□□□□□ -0.55
LINCR-0001-201ENST00000517732 TMEM106CQ9BVX2 250 aa11.64□□□□□ -0.55
LINCR-0001-201ENST00000517732 DEFB129Q9H1M3 183 aa11.64□□□□□ -0.55
LINCR-0001-201ENST00000517732 R3HDMLQ9H3Y0 253 aa11.64□□□□□ -0.55
LINCR-0001-201ENST00000517732 PTPN22Q9Y2R2 807 aa11.64□□□□□ -0.55
LINCR-0001-201ENST00000517732 POTEFA5A3E0 1075 aa11.63□□□□□ -0.55
LINCR-0001-201ENST00000517732 IREB2P48200 963 aaKnown RBP11.63□□□□□ -0.55
LINCR-0001-201ENST00000517732 ARHGEF6Q15052 776 aa11.63□□□□□ -0.55
LINCR-0001-201ENST00000517732 MAP3K11Q16584 847 aa11.63□□□□□ -0.55
LINCR-0001-201ENST00000517732 KSR2Q6VAB6 950 aa11.63□□□□□ -0.55
LINCR-0001-201ENST00000517732 STK31Q9BXU1 1019 aa11.63□□□□□ -0.55
LINCR-0001-201ENST00000517732 EFCC1Q9HA90 598 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms