RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.52□□□□□ -0.41
PCDHGA1-202ENST00000517417 KRT222Q8N1A0 295 aa12.52□□□□□ -0.41
PCDHGA1-202ENST00000517417 AK7Q96M32 723 aa12.52□□□□□ -0.41
PCDHGA1-202ENST00000517417 TEX13AQ9BXU3 409 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA1-202ENST00000517417 METP08581 1390 aa12.52□□□□□ -0.41
PCDHGA1-202ENST00000517417 C6orf229H3BNL8 230 aa12.51□□□□□ -0.41
PCDHGA1-202ENST00000517417 SLC27A2O14975 620 aa12.51□□□□□ -0.41
PCDHGA1-202ENST00000517417 GSDMDP57764 484 aa12.51□□□□□ -0.41
PCDHGA1-202ENST00000517417 LRMPQ12912 555 aa12.51□□□□□ -0.41
PCDHGA1-202ENST00000517417 SNW1Q13573 536 aaKnown RBP12.51□□□□□ -0.41
PCDHGA1-202ENST00000517417 ISM2Q6H9L7 571 aa12.51□□□□□ -0.41
PCDHGA1-202ENST00000517417 TMC6Q7Z403 805 aa12.51□□□□□ -0.41
PCDHGA1-202ENST00000517417 ARHGEF28Q8N1W1 1705 aaKnown RBP12.51□□□□□ -0.41
PCDHGA1-202ENST00000517417 UBXN4Q92575 508 aa12.51□□□□□ -0.41
PCDHGA1-202ENST00000517417 CLSTN2Q9H4D0 955 aa12.51□□□□□ -0.41
PCDHGA1-202ENST00000517417 ATP10DQ9P241 1426 aa12.51□□□□□ -0.41
PCDHGA1-202ENST00000517417 ALKQ9UM73 1620 aa12.51□□□□□ -0.41
PCDHGA1-202ENST00000517417 ARHGEF10O15013 1369 aa12.51□□□□□ -0.41
PCDHGA1-202ENST00000517417 CBFA2T2O43439 604 aa12.51□□□□□ -0.41
PCDHGA1-202ENST00000517417 Q6ZUG5 572 aa12.51□□□□□ -0.41
PCDHGA1-202ENST00000517417 ZNF444Q8N0Y2 327 aaPredicted RBP12.51□□□□□ -0.41
PCDHGA1-202ENST00000517417 USP32Q8NFA0 1604 aa12.51□□□□□ -0.41
PCDHGA1-202ENST00000517417 PTPRMP28827 1452 aa12.51□□□□□ -0.41
PCDHGA1-202ENST00000517417 TTC6Q86TZ1 520 aa12.51□□□□□ -0.41
PCDHGA1-202ENST00000517417 LINS1Q8NG48 757 aa12.51□□□□□ -0.41
PCDHGA1-202ENST00000517417 ZNF76P36508 570 aa12.5□□□□□ -0.41
PCDHGA1-202ENST00000517417 ADCK5Q3MIX3 580 aa12.5□□□□□ -0.41
PCDHGA1-202ENST00000517417 TMEM67Q5HYA8 995 aa12.5□□□□□ -0.41
PCDHGA1-202ENST00000517417 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.5□□□□□ -0.41
PCDHGA1-202ENST00000517417 TMEM87AQ8NBN3 555 aa12.5□□□□□ -0.41
PCDHGA1-202ENST00000517417 KIAA1524Q8TCG1 905 aa12.5□□□□□ -0.41
PCDHGA1-202ENST00000517417 LEO1Q8WVC0 666 aaPredicted RBP12.5□□□□□ -0.41
PCDHGA1-202ENST00000517417 KIF13AQ9H1H9 1805 aa12.5□□□□□ -0.41
PCDHGA1-202ENST00000517417 LARGE1O95461 756 aa12.5□□□□□ -0.41
PCDHGA1-202ENST00000517417 IARSP41252 1262 aaKnown RBP12.5□□□□□ -0.41
PCDHGA1-202ENST00000517417 CRACR2BQ8N4Y2 399 aaPredicted RBP12.5□□□□□ -0.41
PCDHGA1-202ENST00000517417 AOPEPQ8N6M6 819 aa12.5□□□□□ -0.41
PCDHGA1-202ENST00000517417 AGLP35573 1532 aa12.5□□□□□ -0.41
PCDHGA1-202ENST00000517417 SBNO1A3KN83 1393 aa12.5□□□□□ -0.41
PCDHGA1-202ENST00000517417 ALDH1L1O75891 902 aa12.5□□□□□ -0.41
PCDHGA1-202ENST00000517417 EIF5P55010 431 aaKnown RBP12.5□□□□□ -0.41
PCDHGA1-202ENST00000517417 SIRT1Q96EB6 747 aa12.5□□□□□ -0.41
PCDHGA1-202ENST00000517417 RPS6KB1P23443 525 aa12.5□□□□□ -0.41
PCDHGA1-202ENST00000517417 CEP131Q9UPN4 1083 aa12.5□□□□□ -0.41
PCDHGA1-202ENST00000517417 DMTNQ08495 405 aa12.49□□□□□ -0.41
PCDHGA1-202ENST00000517417 TM6SF1Q9BZW5 370 aa12.49□□□□□ -0.41
PCDHGA1-202ENST00000517417 TMCO3Q6UWJ1 677 aa12.49□□□□□ -0.41
PCDHGA1-202ENST00000517417 TPCN1Q9ULQ1 816 aa12.49□□□□□ -0.41
PCDHGA1-202ENST00000517417 NPHP4O75161 1426 aaPredicted RBP12.49□□□□□ -0.41
PCDHGA1-202ENST00000517417 SYCP1Q15431 976 aa12.49□□□□□ -0.41
PCDHGA1-202ENST00000517417 RNF41Q9H4P4 317 aaPredicted RBP12.49□□□□□ -0.41
PCDHGA1-202ENST00000517417 KIF20AO95235 890 aa12.49□□□□□ -0.41
PCDHGA1-202ENST00000517417 ZNF397Q8NF99 534 aaPredicted RBP12.49□□□□□ -0.41
PCDHGA1-202ENST00000517417 CDC5LQ99459 802 aaKnown RBP12.49□□□□□ -0.41
PCDHGA1-202ENST00000517417 ZNF287Q9HBT7 754 aa12.49□□□□□ -0.41
PCDHGA1-202ENST00000517417 ZSWIM6Q9HCJ5 1215 aa12.49□□□□□ -0.41
PCDHGA1-202ENST00000517417 SEC63Q9UGP8 760 aaKnown RBP12.49□□□□□ -0.41
PCDHGA1-202ENST00000517417 LTKP29376 864 aa12.48□□□□□ -0.41
PCDHGA1-202ENST00000517417 HOXC9P31274 260 aa12.48□□□□□ -0.41
PCDHGA1-202ENST00000517417 SSRP1Q08945 709 aaKnown RBP12.48□□□□□ -0.41
PCDHGA1-202ENST00000517417 ATP2B3Q16720 1220 aa12.48□□□□□ -0.41
PCDHGA1-202ENST00000517417 CNNM3Q8NE01 707 aa12.48□□□□□ -0.41
PCDHGA1-202ENST00000517417 HELBQ8NG08 1087 aaPredicted RBP12.48□□□□□ -0.41
PCDHGA1-202ENST00000517417 VAT1LQ9HCJ6 419 aa12.48□□□□□ -0.41
PCDHGA1-202ENST00000517417 MRVI1Q9Y6F6 885 aa12.48□□□□□ -0.41
PCDHGA1-202ENST00000517417 URI1O94763 535 aaPredicted RBP12.48□□□□□ -0.41
PCDHGA1-202ENST00000517417 RPGRQ92834 1020 aaKnown RBP12.48□□□□□ -0.41
PCDHGA1-202ENST00000517417 PLEKHG1Q9ULL1 1385 aa12.48□□□□□ -0.41
PCDHGA1-202ENST00000517417 KLF18A0A0U1RQI7 1052 aa12.48□□□□□ -0.41
PCDHGA1-202ENST00000517417 NLRP5P59047 1200 aa12.48□□□□□ -0.41
PCDHGA1-202ENST00000517417 SLU7O95391 586 aaKnown RBP12.47□□□□□ -0.41
PCDHGA1-202ENST00000517417 ARHGAP29Q52LW3 1261 aa12.47□□□□□ -0.41
PCDHGA1-202ENST00000517417 AXDND1Q5T1B0 1012 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA1-202ENST00000517417 MFSD6Q6ZSS7 791 aa12.47□□□□□ -0.41
PCDHGA1-202ENST00000517417 CHST3Q7LGC8 479 aa12.47□□□□□ -0.41
PCDHGA1-202ENST00000517417 NCOA7Q8NI08 942 aa12.47□□□□□ -0.41
PCDHGA1-202ENST00000517417 CPLX3Q8WVH0 158 aa12.47□□□□□ -0.41
PCDHGA1-202ENST00000517417 ARHGEF40Q8TER5 1519 aa12.47□□□□□ -0.41
PCDHGA1-202ENST00000517417 CATIPQ7Z7H3 387 aa12.47□□□□□ -0.41
PCDHGA1-202ENST00000517417 IL17REQ8NFR9 667 aa12.47□□□□□ -0.41
PCDHGA1-202ENST00000517417 SLC26A6Q9BXS9 759 aa12.47□□□□□ -0.41
PCDHGA1-202ENST00000517417 TMOD2Q9NZR1 351 aa12.47□□□□□ -0.41
PCDHGA1-202ENST00000517417 NRBP1Q9UHY1 535 aa12.47□□□□□ -0.41
PCDHGA1-202ENST00000517417 FBXO3Q9UK99 471 aa12.47□□□□□ -0.41
PCDHGA1-202ENST00000517417 METAP2P50579 478 aaKnown RBP eCLIP12.47□□□□□ -0.41
PCDHGA1-202ENST00000517417 TTF1Q15361 905 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA1-202ENST00000517417 TSPY2A6NKD2 308 aa12.47□□□□□ -0.41
PCDHGA1-202ENST00000517417 JAK2O60674 1132 aa12.47□□□□□ -0.41
PCDHGA1-202ENST00000517417 SLC9C2Q5TAH2 1124 aa12.47□□□□□ -0.41
PCDHGA1-202ENST00000517417 ORAI2Q96SN7 254 aa12.47□□□□□ -0.41
PCDHGA1-202ENST00000517417 CCDC194A0A1B0GVG4 234 aa12.46□□□□□ -0.41
PCDHGA1-202ENST00000517417 NR1I2O75469 434 aa12.46□□□□□ -0.41
PCDHGA1-202ENST00000517417 CCDC150Q8NCX0 1101 aa12.46□□□□□ -0.41
PCDHGA1-202ENST00000517417 PI4K2BQ8TCG2 481 aa12.46□□□□□ -0.41
PCDHGA1-202ENST00000517417 CNKSR2Q8WXI2 1034 aa12.46□□□□□ -0.41
PCDHGA1-202ENST00000517417 CCDC96Q2M329 555 aa12.46□□□□□ -0.41
PCDHGA1-202ENST00000517417 TRMT1LQ7Z2T5 733 aaKnown RBP12.46□□□□□ -0.41
PCDHGA1-202ENST00000517417 ERCC4Q92889 916 aaPredicted RBP12.46□□□□□ -0.41
PCDHGA1-202ENST00000517417 BICC1Q9H694 974 aaKnown RBP12.46□□□□□ -0.41
PCDHGA1-202ENST00000517417 STX8Q9UNK0 236 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms