RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 DEFB132Q7Z7B7 95 aa9.22□□□□□ -0.93
SCARNA20.1-201ENST00000516009 CCDC125Q86Z20 511 aa9.22□□□□□ -0.93
SCARNA20.1-201ENST00000516009 RBM17Q96I25 401 aaKnown RBP9.22□□□□□ -0.93
SCARNA20.1-201ENST00000516009 FAM227BQ96M60 508 aa9.22□□□□□ -0.93
SCARNA20.1-201ENST00000516009 IL25Q9H293 177 aa9.22□□□□□ -0.93
SCARNA20.1-201ENST00000516009 SNRKQ9NRH2 765 aa9.22□□□□□ -0.93
SCARNA20.1-201ENST00000516009 A0A0D9SFI3 127 aa9.21□□□□□ -0.94
SCARNA20.1-201ENST00000516009 KLRG2A4D1S0 409 aaPredicted RBP9.21□□□□□ -0.94
SCARNA20.1-201ENST00000516009 SNAP23O00161 211 aa9.21□□□□□ -0.94
SCARNA20.1-201ENST00000516009 MCAMP43121 646 aa9.21□□□□□ -0.94
SCARNA20.1-201ENST00000516009 ZAP70P43403 619 aa9.21□□□□□ -0.94
SCARNA20.1-201ENST00000516009 TTF1Q15361 905 aaPredicted RBP9.21□□□□□ -0.94
SCARNA20.1-201ENST00000516009 MSL1Q68DK7 614 aa9.21□□□□□ -0.94
SCARNA20.1-201ENST00000516009 ILDR1Q86SU0 546 aaPredicted RBP9.21□□□□□ -0.94
SCARNA20.1-201ENST00000516009 KIF2CQ99661 725 aa9.21□□□□□ -0.94
SCARNA20.1-201ENST00000516009 BRIP1Q9BX63 1249 aa9.21□□□□□ -0.94
SCARNA20.1-201ENST00000516009 LSG1Q9H089 658 aaKnown RBP9.21□□□□□ -0.94
SCARNA20.1-201ENST00000516009 GNL3LQ9NVN8 582 aaKnown RBP9.21□□□□□ -0.94
SCARNA20.1-201ENST00000516009 LRRC37AA6NMS7 1700 aa9.21□□□□□ -0.94
SCARNA20.1-201ENST00000516009 COL11A2P13942 1736 aaPredicted RBP9.21□□□□□ -0.94
SCARNA20.1-201ENST00000516009 MED23Q9ULK4 1368 aa9.21□□□□□ -0.94
SCARNA20.1-201ENST00000516009 RNF113AO15541 343 aaKnown RBP9.2□□□□□ -0.94
SCARNA20.1-201ENST00000516009 ZFYP08048 801 aaPredicted RBP9.2□□□□□ -0.94
SCARNA20.1-201ENST00000516009 HOXA10P31260 410 aaPredicted RBP9.2□□□□□ -0.94
SCARNA20.1-201ENST00000516009 PDE6BP35913 854 aa9.2□□□□□ -0.94
SCARNA20.1-201ENST00000516009 ANAPC15P60006 121 aa9.2□□□□□ -0.94
SCARNA20.1-201ENST00000516009 RABEP1Q15276 862 aa9.2□□□□□ -0.94
SCARNA20.1-201ENST00000516009 CAVIN4Q5BKX8 364 aa9.2□□□□□ -0.94
SCARNA20.1-201ENST00000516009 PI16Q6UXB8 463 aa9.2□□□□□ -0.94
SCARNA20.1-201ENST00000516009 SPATA5Q8NB90 893 aa9.2□□□□□ -0.94
SCARNA20.1-201ENST00000516009 CRAMP1Q96RY5 1269 aa9.2□□□□□ -0.94
SCARNA20.1-201ENST00000516009 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.2□□□□□ -0.94
SCARNA20.1-201ENST00000516009 ANTXR1Q9H6X2 564 aa9.2□□□□□ -0.94
SCARNA20.1-201ENST00000516009 CCDC171Q6TFL3 1326 aa9.2□□□□□ -0.94
SCARNA20.1-201ENST00000516009 BBOX1O75936 387 aa9.19□□□□□ -0.94
SCARNA20.1-201ENST00000516009 NPR1P16066 1061 aa9.19□□□□□ -0.94
SCARNA20.1-201ENST00000516009 HSPA4P34932 840 aa9.19□□□□□ -0.94
SCARNA20.1-201ENST00000516009 BCAMP50895 628 aa9.19□□□□□ -0.94
SCARNA20.1-201ENST00000516009 RASGRF1Q13972 1273 aa9.19□□□□□ -0.94
SCARNA20.1-201ENST00000516009 MCMDC2Q4G0Z9 681 aa9.19□□□□□ -0.94
SCARNA20.1-201ENST00000516009 ZMYM1Q5SVZ6 1142 aa9.19□□□□□ -0.94
SCARNA20.1-201ENST00000516009 ZSCAN25Q6NSZ9 544 aa9.19□□□□□ -0.94
SCARNA20.1-201ENST00000516009 TMC4Q7Z404 712 aa9.19□□□□□ -0.94
SCARNA20.1-201ENST00000516009 VPS37DQ86XT2 251 aa9.19□□□□□ -0.94
SCARNA20.1-201ENST00000516009 HSCBQ8IWL3 235 aa9.19□□□□□ -0.94
SCARNA20.1-201ENST00000516009 HELLSQ9NRZ9 838 aa9.19□□□□□ -0.94
SCARNA20.1-201ENST00000516009 HMG20BQ9P0W2 317 aa9.19□□□□□ -0.94
SCARNA20.1-201ENST00000516009 ANKIB1Q9P2G1 1089 aa9.19□□□□□ -0.94
SCARNA20.1-201ENST00000516009 LEMD3Q9Y2U8 911 aa9.19□□□□□ -0.94
SCARNA20.1-201ENST00000516009 ZNF804BA4D1E1 1349 aa9.19□□□□□ -0.94
SCARNA20.1-201ENST00000516009 XDHP47989 1333 aa9.19□□□□□ -0.94
SCARNA20.1-201ENST00000516009 CYP2E1P05181 493 aaPredicted RBP9.18□□□□□ -0.94
SCARNA20.1-201ENST00000516009 GYG1P46976 350 aa9.18□□□□□ -0.94
SCARNA20.1-201ENST00000516009 PTH1RQ03431 593 aa9.18□□□□□ -0.94
SCARNA20.1-201ENST00000516009 CCDC88AQ3V6T2 1871 aa9.18□□□□□ -0.94
SCARNA20.1-201ENST00000516009 ZNF589Q86UQ0 364 aaPredicted RBP9.18□□□□□ -0.94
SCARNA20.1-201ENST00000516009 SNX21Q969T3 373 aa9.18□□□□□ -0.94
SCARNA20.1-201ENST00000516009 FAM84BQ96KN1 310 aaPredicted RBP9.18□□□□□ -0.94
SCARNA20.1-201ENST00000516009 SEC62Q99442 399 aaKnown RBP9.18□□□□□ -0.94
SCARNA20.1-201ENST00000516009 TBC1D2Q9BYX2 928 aa9.18□□□□□ -0.94
SCARNA20.1-201ENST00000516009 PALD1Q9ULE6 856 aa9.18□□□□□ -0.94
SCARNA20.1-201ENST00000516009 LTBP1Q14766 1721 aa9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 WTIPA6NIX2 430 aaPredicted RBP9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 PPEF1O14829 653 aaPredicted RBP9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 SEMA3EO15041 775 aa9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 ST18O60284 1047 aa9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 IDH1O75874 414 aaKnown RBP9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 CHGBP05060 677 aa9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 SRGNP10124 158 aa9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 ALDH1B1P30837 517 aa9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 HIBADHP31937 336 aaKnown RBP9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 SLC4A3P48751 1232 aa9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 MAP3K12Q12852 859 aa9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 WASHC4Q2M389 1173 aa9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 RNF20Q5VTR2 975 aa9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 ERICH6Q7L0X2 663 aa9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 FBXO33Q7Z6M2 555 aa9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 SLC16A10Q8TF71 515 aa9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 APPBP2Q92624 585 aa9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 MAP4K1Q92918 833 aa9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 IL17RAQ96F46 866 aa9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 PIH1D3Q9NQM4 214 aaKnown RBP9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 DENND2AQ9ULE3 1009 aa9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 RBM8AQ9Y5S9 174 aaKnown RBP9.17□□□□□ -0.94
SCARNA20.1-201ENST00000516009 MAST3O60307 1309 aa9.16□□□□□ -0.94
SCARNA20.1-201ENST00000516009 H0YIN7 160 aa9.16□□□□□ -0.94
SCARNA20.1-201ENST00000516009 FRAT2O75474 233 aaPredicted RBP9.16□□□□□ -0.94
SCARNA20.1-201ENST00000516009 UFL1O94874 794 aa9.16□□□□□ -0.94
SCARNA20.1-201ENST00000516009 ATP2B4P23634 1241 aa9.16□□□□□ -0.94
SCARNA20.1-201ENST00000516009 KLRK1P26718 216 aa9.16□□□□□ -0.94
SCARNA20.1-201ENST00000516009 ADD2P35612 726 aa9.16□□□□□ -0.94
SCARNA20.1-201ENST00000516009 GPSM2P81274 684 aa9.16□□□□□ -0.94
SCARNA20.1-201ENST00000516009 UBE3CQ15386 1083 aa9.16□□□□□ -0.94
SCARNA20.1-201ENST00000516009 SLC9C2Q5TAH2 1124 aa9.16□□□□□ -0.94
SCARNA20.1-201ENST00000516009 CCDC129Q6ZRS4 1044 aa9.16□□□□□ -0.94
SCARNA20.1-201ENST00000516009 C2CD5Q86YS7 1000 aa9.16□□□□□ -0.94
SCARNA20.1-201ENST00000516009 SP8Q8IXZ3 490 aa9.16□□□□□ -0.94
SCARNA20.1-201ENST00000516009 IL27Q8NEV9 243 aa9.16□□□□□ -0.94
SCARNA20.1-201ENST00000516009 MASTLQ96GX5 879 aa9.16□□□□□ -0.94
SCARNA20.1-201ENST00000516009 TMX4Q9H1E5 349 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms