RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 ABCC11Q96J66 1382 aa12.51□□□□□ -0.41
TRIM41-209ENST00000515834 ATP2C2O75185 946 aa12.51□□□□□ -0.41
TRIM41-209ENST00000515834 NACA2Q9H009 215 aa12.51□□□□□ -0.41
TRIM41-209ENST00000515834 USP25Q9UHP3 1055 aa12.51□□□□□ -0.41
TRIM41-209ENST00000515834 PLEKHH1Q9ULM0 1364 aa12.51□□□□□ -0.41
TRIM41-209ENST00000515834 CNBD1Q8NA66 436 aa12.51□□□□□ -0.41
TRIM41-209ENST00000515834 C16orf45Q96MC5 204 aaPredicted RBP12.51□□□□□ -0.41
TRIM41-209ENST00000515834 TRIM6Q9C030 488 aaPredicted RBP12.51□□□□□ -0.41
TRIM41-209ENST00000515834 CCNL1Q9UK58 526 aaPredicted RBP12.51□□□□□ -0.41
TRIM41-209ENST00000515834 CCDC155Q8N6L0 562 aa12.51□□□□□ -0.41
TRIM41-209ENST00000515834 MAK16Q9BXY0 300 aaKnown RBP12.51□□□□□ -0.41
TRIM41-209ENST00000515834 NOP56O00567 594 aaKnown RBP12.51□□□□□ -0.41
TRIM41-209ENST00000515834 FNBP4Q8N3X1 1017 aaPredicted RBP12.51□□□□□ -0.41
TRIM41-209ENST00000515834 KRT5P13647 590 aa12.51□□□□□ -0.41
TRIM41-209ENST00000515834 DHX58Q96C10 678 aa12.51□□□□□ -0.41
TRIM41-209ENST00000515834 DDX19AQ9NUU7 478 aaKnown RBP12.51□□□□□ -0.41
TRIM41-209ENST00000515834 ZWINTO95229 277 aa12.5□□□□□ -0.41
TRIM41-209ENST00000515834 C6orf163Q5TEZ5 329 aa12.5□□□□□ -0.41
TRIM41-209ENST00000515834 HMG20BQ9P0W2 317 aa12.5□□□□□ -0.41
TRIM41-209ENST00000515834 ZFYP08048 801 aaPredicted RBP12.5□□□□□ -0.41
TRIM41-209ENST00000515834 MYCLP12524 364 aaPredicted RBP12.5□□□□□ -0.41
TRIM41-209ENST00000515834 POLA1P09884 1462 aaPredicted RBP12.5□□□□□ -0.41
TRIM41-209ENST00000515834 TRIM27P14373 513 aa12.5□□□□□ -0.41
TRIM41-209ENST00000515834 KRT79Q5XKE5 535 aa12.5□□□□□ -0.41
TRIM41-209ENST00000515834 FCHSD1Q86WN1 690 aa12.5□□□□□ -0.41
TRIM41-209ENST00000515834 LARGE2Q8N3Y3 721 aa12.5□□□□□ -0.41
TRIM41-209ENST00000515834 CEP112Q8N8E3 955 aa12.5□□□□□ -0.41
TRIM41-209ENST00000515834 ANKRD2Q9GZV1 360 aa12.5□□□□□ -0.41
TRIM41-209ENST00000515834 TXNDC16Q9P2K2 825 aa12.5□□□□□ -0.41
TRIM41-209ENST00000515834 C20orf194Q5TEA3 1177 aa12.5□□□□□ -0.41
TRIM41-209ENST00000515834 Q6ZUG5 572 aa12.5□□□□□ -0.41
TRIM41-209ENST00000515834 ABCC5O15440 1437 aa12.49□□□□□ -0.41
TRIM41-209ENST00000515834 PTPDC1A2A3K4 754 aa12.49□□□□□ -0.41
TRIM41-209ENST00000515834 TCIRG1Q13488 830 aa12.49□□□□□ -0.41
TRIM41-209ENST00000515834 PA2G4Q9UQ80 394 aaKnown RBP12.49□□□□□ -0.41
TRIM41-209ENST00000515834 FAM169AQ9Y6X4 670 aa12.49□□□□□ -0.41
TRIM41-209ENST00000515834 GRM8O00222 908 aa12.49□□□□□ -0.41
TRIM41-209ENST00000515834 CKAP4Q07065 602 aaKnown RBP12.49□□□□□ -0.41
TRIM41-209ENST00000515834 BMS1Q14692 1282 aaKnown RBP12.49□□□□□ -0.41
TRIM41-209ENST00000515834 MSANTD4Q8NCY6 345 aa12.49□□□□□ -0.41
TRIM41-209ENST00000515834 RHPN1Q8TCX5 695 aa12.49□□□□□ -0.41
TRIM41-209ENST00000515834 GABPAQ06546 454 aa12.49□□□□□ -0.41
TRIM41-209ENST00000515834 KMT5BQ4FZB7 885 aa12.49□□□□□ -0.41
TRIM41-209ENST00000515834 MCMDC2Q4G0Z9 681 aa12.49□□□□□ -0.41
TRIM41-209ENST00000515834 ZKSCAN3Q9BRR0 538 aa12.49□□□□□ -0.41
TRIM41-209ENST00000515834 CCDC24Q8N4L8 307 aa12.49□□□□□ -0.41
TRIM41-209ENST00000515834 SELENOOQ9BVL4 669 aa12.49□□□□□ -0.41
TRIM41-209ENST00000515834 CCDC169A6NNP5 214 aa12.49□□□□□ -0.41
TRIM41-209ENST00000515834 KRT9P35527 623 aa12.49□□□□□ -0.41
TRIM41-209ENST00000515834 BIRC3Q13489 604 aa12.49□□□□□ -0.41
TRIM41-209ENST00000515834 PAG1Q9NWQ8 432 aa12.49□□□□□ -0.41
TRIM41-209ENST00000515834 RXRAP19793 462 aa12.49□□□□□ -0.41
TRIM41-209ENST00000515834 DCAF17Q5H9S7 520 aaPredicted RBP12.49□□□□□ -0.41
TRIM41-209ENST00000515834 TIGD1Q96MW7 591 aa12.49□□□□□ -0.41
TRIM41-209ENST00000515834 DENND4BO75064 1496 aaPredicted RBP12.48□□□□□ -0.41
TRIM41-209ENST00000515834 KIF14Q15058 1648 aa12.48□□□□□ -0.41
TRIM41-209ENST00000515834 H0YIN7 160 aa12.48□□□□□ -0.41
TRIM41-209ENST00000515834 DDX39AO00148 427 aaKnown RBP12.48□□□□□ -0.41
TRIM41-209ENST00000515834 KRT2P35908 639 aa12.48□□□□□ -0.41
TRIM41-209ENST00000515834 TEX11Q8IYF3 940 aa12.48□□□□□ -0.41
TRIM41-209ENST00000515834 RASAL2Q9UJF2 1139 aa12.48□□□□□ -0.41
TRIM41-209ENST00000515834 GAS8O95995 478 aa12.48□□□□□ -0.41
TRIM41-209ENST00000515834 SPECC1LQ69YQ0 1117 aa12.48□□□□□ -0.41
TRIM41-209ENST00000515834 HS2ST1Q7LGA3 356 aa12.48□□□□□ -0.41
TRIM41-209ENST00000515834 ARAP1Q96P48 1450 aa12.48□□□□□ -0.41
TRIM41-209ENST00000515834 MAGI1Q96QZ7 1491 aaPredicted RBP12.48□□□□□ -0.41
TRIM41-209ENST00000515834 HSF2BPO75031 334 aa12.48□□□□□ -0.41
TRIM41-209ENST00000515834 PARP1P09874 1014 aaKnown RBP12.48□□□□□ -0.41
TRIM41-209ENST00000515834 IL15P40933 162 aaPredicted RBP12.48□□□□□ -0.41
TRIM41-209ENST00000515834 UBASH3AP57075 661 aa12.48□□□□□ -0.41
TRIM41-209ENST00000515834 MAP7D1Q3KQU3 841 aa12.48□□□□□ -0.41
TRIM41-209ENST00000515834 MAEAQ7L5Y9 396 aa12.48□□□□□ -0.41
TRIM41-209ENST00000515834 SPATA24Q86W54 205 aa12.48□□□□□ -0.41
TRIM41-209ENST00000515834 FBF1Q8TES7 1133 aa12.48□□□□□ -0.41
TRIM41-209ENST00000515834 SH2D4AQ9H788 454 aa12.48□□□□□ -0.41
TRIM41-209ENST00000515834 EFCAB5A4FU69 1503 aa12.48□□□□□ -0.41
TRIM41-209ENST00000515834 TOPBP1Q92547 1522 aa12.48□□□□□ -0.41
TRIM41-209ENST00000515834 NKTRP30414 1462 aaKnown RBP12.48□□□□□ -0.41
TRIM41-209ENST00000515834 FNBP1Q96RU3 617 aa12.48□□□□□ -0.41
TRIM41-209ENST00000515834 APBA3O96018 575 aa12.47□□□□□ -0.41
TRIM41-209ENST00000515834 FAM98CQ17RN3 349 aaKnown RBP12.47□□□□□ -0.41
TRIM41-209ENST00000515834 AKAP4Q5JQC9 854 aa12.47□□□□□ -0.41
TRIM41-209ENST00000515834 TBC1D9Q6ZT07 1266 aa12.47□□□□□ -0.41
TRIM41-209ENST00000515834 MICALCLQ6ZW33 695 aa12.47□□□□□ -0.41
TRIM41-209ENST00000515834 DDX12PQ92771 950 aa12.47□□□□□ -0.41
TRIM41-209ENST00000515834 ZBTB24O43167 697 aaPredicted RBP12.47□□□□□ -0.41
TRIM41-209ENST00000515834 PSMA7O14818 248 aa12.47□□□□□ -0.41
TRIM41-209ENST00000515834 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.47□□□□□ -0.416e-8■□□□□ 11.1
TRIM41-209ENST00000515834 SMC1BQ8NDV3 1235 aa12.47□□□□□ -0.41
TRIM41-209ENST00000515834 KIFC2Q96AC6 838 aa12.47□□□□□ -0.41
TRIM41-209ENST00000515834 RTL9Q8NET4 1388 aa12.47□□□□□ -0.41
TRIM41-209ENST00000515834 SMIM23A6NLE4 172 aa12.47□□□□□ -0.41
TRIM41-209ENST00000515834 GNG11P61952 73 aa12.47□□□□□ -0.41
TRIM41-209ENST00000515834 ARHGEF10LQ9HCE6 1279 aa12.47□□□□□ -0.41
TRIM41-209ENST00000515834 CRCPO75575 148 aa12.47□□□□□ -0.41
TRIM41-209ENST00000515834 SLC8A3P57103 927 aa12.47□□□□□ -0.41
TRIM41-209ENST00000515834 GSDMDP57764 484 aa12.47□□□□□ -0.41
TRIM41-209ENST00000515834 SNW1Q13573 536 aaKnown RBP12.47□□□□□ -0.41
TRIM41-209ENST00000515834 GEN1Q17RS7 908 aa12.47□□□□□ -0.41
TRIM41-209ENST00000515834 CFAP58Q5T655 872 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms