RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 EPHA1P21709 976 aa6.5□□□□□ -1.37
HERC4-215ENST00000515753 DUOXA2Q1HG44 320 aa6.5□□□□□ -1.37
HERC4-215ENST00000515753 TMEM164Q5U3C3 297 aa6.5□□□□□ -1.37
HERC4-215ENST00000515753 KIAA1211Q6ZU35 1233 aa6.5□□□□□ -1.37
HERC4-215ENST00000515753 NCAPG2Q86XI2 1143 aa6.5□□□□□ -1.37
HERC4-215ENST00000515753 UTP4Q969X6 686 aaKnown RBP6.5□□□□□ -1.37
HERC4-215ENST00000515753 ABI2Q9NYB9 513 aaPredicted RBP6.5□□□□□ -1.37
HERC4-215ENST00000515753 STIM2Q9P246 746 aa6.5□□□□□ -1.37
HERC4-215ENST00000515753 KANSL3Q9P2N6 904 aa6.5□□□□□ -1.37
HERC4-215ENST00000515753 FNDC3AQ9Y2H6 1198 aaKnown RBP6.5□□□□□ -1.37
HERC4-215ENST00000515753 HMX2A2RU54 273 aa6.49□□□□□ -1.37
HERC4-215ENST00000515753 ATCAYQ86WG3 371 aa6.49□□□□□ -1.37
HERC4-215ENST00000515753 TRIM42Q8IWZ5 723 aa6.49□□□□□ -1.37
HERC4-215ENST00000515753 UBASH3BQ8TF42 649 aa6.49□□□□□ -1.37
HERC4-215ENST00000515753 FOXD4L4Q8WXT5 416 aaPredicted RBP6.49□□□□□ -1.37
HERC4-215ENST00000515753 KLHDC7BQ96G42 594 aa6.49□□□□□ -1.37
HERC4-215ENST00000515753 POP1Q99575 1024 aaKnown RBP6.49□□□□□ -1.37
HERC4-215ENST00000515753 PBX4Q9BYU1 374 aa6.49□□□□□ -1.37
HERC4-215ENST00000515753 CEP41Q9BYV8 373 aa6.49□□□□□ -1.37
HERC4-215ENST00000515753 GOLGA2P5Q9HBQ8 144 aa6.49□□□□□ -1.37
HERC4-215ENST00000515753 TMEM63CQ9P1W3 806 aa6.49□□□□□ -1.37
HERC4-215ENST00000515753 ADAM11O75078 769 aa6.48□□□□□ -1.37
HERC4-215ENST00000515753 COBLO75128 1261 aa6.48□□□□□ -1.37
HERC4-215ENST00000515753 KIF4AO95239 1232 aa6.48□□□□□ -1.37
HERC4-215ENST00000515753 ACPPP15309 386 aa6.48□□□□□ -1.37
HERC4-215ENST00000515753 FAM117BQ6P1L5 589 aa6.48□□□□□ -1.37
HERC4-215ENST00000515753 CEP120Q8N960 986 aa6.48□□□□□ -1.37
HERC4-215ENST00000515753 NUDT16Q96DE0 195 aaKnown RBP6.48□□□□□ -1.37
HERC4-215ENST00000515753 C7orf69Q9H7B7 122 aa6.48□□□□□ -1.37
HERC4-215ENST00000515753 ELP3Q9H9T3 547 aa6.48□□□□□ -1.37
HERC4-215ENST00000515753 CNTN3Q9P232 1028 aa6.48□□□□□ -1.37
HERC4-215ENST00000515753 GSC2O15499 205 aa6.47□□□□□ -1.37
HERC4-215ENST00000515753 TRPA1O75762 1119 aa6.47□□□□□ -1.37
HERC4-215ENST00000515753 NFIAQ12857 509 aa6.47□□□□□ -1.37
HERC4-215ENST00000515753 ZDHHC13Q8IUH4 622 aa6.47□□□□□ -1.37
HERC4-215ENST00000515753 KLHL23Q8NBE8 558 aa6.47□□□□□ -1.37
HERC4-215ENST00000515753 FAM46AQ96IP4 442 aaKnown RBP6.47□□□□□ -1.37
HERC4-215ENST00000515753 SLAIN2Q9P270 581 aa6.47□□□□□ -1.37
HERC4-215ENST00000515753 SEPT3Q9UH03 358 aa6.47□□□□□ -1.37
HERC4-215ENST00000515753 OAS3Q9Y6K5 1087 aaKnown RBP6.47□□□□□ -1.37
HERC4-215ENST00000515753 ADAMTS4O75173 837 aa6.46□□□□□ -1.38
HERC4-215ENST00000515753 PTPRAP18433 802 aa6.46□□□□□ -1.38
HERC4-215ENST00000515753 ZNF438Q7Z4V0 828 aa6.46□□□□□ -1.38
HERC4-215ENST00000515753 SEC31BQ9NQW1 1179 aa6.46□□□□□ -1.38
HERC4-215ENST00000515753 COL17A1Q9UMD9 1497 aaPredicted RBP6.46□□□□□ -1.38
HERC4-215ENST00000515753 A6NHS1 94 aa6.45□□□□□ -1.38
HERC4-215ENST00000515753 FAM177BA6PVY3 158 aa6.45□□□□□ -1.38
HERC4-215ENST00000515753 IRAK1P51617 712 aa6.45□□□□□ -1.38
HERC4-215ENST00000515753 GP2P55259 537 aaKnown RBP6.45□□□□□ -1.38
HERC4-215ENST00000515753 NLRP12P59046 1061 aa6.45□□□□□ -1.38
HERC4-215ENST00000515753 ABTB2Q8N961 1025 aa6.45□□□□□ -1.38
HERC4-215ENST00000515753 C1orf127Q8N9H9 656 aa6.45□□□□□ -1.38
HERC4-215ENST00000515753 SLC7A3Q8WY07 619 aa6.45□□□□□ -1.38
HERC4-215ENST00000515753 MYRFLQ96LU7 910 aa6.45□□□□□ -1.38
HERC4-215ENST00000515753 HHIPQ96QV1 700 aa6.45□□□□□ -1.38
HERC4-215ENST00000515753 KCNF1Q9H3M0 494 aa6.45□□□□□ -1.38
HERC4-215ENST00000515753 KIAA1324LA8MWY0 1029 aaPredicted RBP6.44□□□□□ -1.38
HERC4-215ENST00000515753 SART1O43290 800 aaKnown RBP6.44□□□□□ -1.38
HERC4-215ENST00000515753 BMP3P12645 472 aa6.44□□□□□ -1.38
HERC4-215ENST00000515753 PREPP48147 710 aa6.44□□□□□ -1.38
HERC4-215ENST00000515753 UVSSAQ2YD98 709 aa6.44□□□□□ -1.38
HERC4-215ENST00000515753 HGSNATQ68CP4 663 aa6.44□□□□□ -1.38
HERC4-215ENST00000515753 RNF43Q68DV7 783 aa6.44□□□□□ -1.38
HERC4-215ENST00000515753 PDE12Q6L8Q7 609 aaKnown RBP6.44□□□□□ -1.38
HERC4-215ENST00000515753 FAM20CQ8IXL6 584 aa6.44□□□□□ -1.38
HERC4-215ENST00000515753 CLP1Q92989 425 aaKnown RBP6.44□□□□□ -1.38
HERC4-215ENST00000515753 ADAM19Q9H013 955 aa6.44□□□□□ -1.38
HERC4-215ENST00000515753 PRR19A6NJB7 356 aa6.43□□□□□ -1.38
HERC4-215ENST00000515753 H3BRJ5 948 aa6.43□□□□□ -1.38
HERC4-215ENST00000515753 PAX4O43316 350 aa6.43□□□□□ -1.38
HERC4-215ENST00000515753 TAL1P17542 331 aaPredicted RBP6.43□□□□□ -1.38
HERC4-215ENST00000515753 DNM1Q05193 864 aaKnown RBP6.43□□□□□ -1.38
HERC4-215ENST00000515753 BEND4Q6ZU67 534 aa6.43□□□□□ -1.38
HERC4-215ENST00000515753 EDEM1Q92611 657 aa6.43□□□□□ -1.38
HERC4-215ENST00000515753 DBNDD2Q9BQY9 259 aa6.43□□□□□ -1.38
HERC4-215ENST00000515753 SALL4Q9UJQ4 1053 aa6.43□□□□□ -1.38
HERC4-215ENST00000515753 NFKBIEO00221 500 aa6.42□□□□□ -1.38
HERC4-215ENST00000515753 CES1P23141 567 aa6.42□□□□□ -1.38
HERC4-215ENST00000515753 ATP2B4P23634 1241 aa6.42□□□□□ -1.38
HERC4-215ENST00000515753 CABP4P57796 275 aa6.42□□□□□ -1.38
HERC4-215ENST00000515753 C8orf34Q49A92 452 aa6.42□□□□□ -1.38
HERC4-215ENST00000515753 CLEC10AQ8IUN9 316 aa6.42□□□□□ -1.38
HERC4-215ENST00000515753 SHKBP1Q8TBC3 707 aa6.42□□□□□ -1.38
HERC4-215ENST00000515753 FAM83CQ9BQN1 747 aa6.42□□□□□ -1.38
HERC4-215ENST00000515753 GGNBP2Q9H3C7 697 aa6.42□□□□□ -1.38
HERC4-215ENST00000515753 PDE2AO00408 941 aaPredicted RBP6.41□□□□□ -1.38
HERC4-215ENST00000515753 SPINK2P20155 84 aa6.41□□□□□ -1.38
HERC4-215ENST00000515753 GRIK1P39086 918 aa6.41□□□□□ -1.38
HERC4-215ENST00000515753 PIP4K2BP78356 416 aa6.41□□□□□ -1.38
HERC4-215ENST00000515753 RUSC1Q9BVN2 902 aa6.41□□□□□ -1.38
HERC4-215ENST00000515753 DZANK1Q9NVP4 752 aa6.41□□□□□ -1.38
HERC4-215ENST00000515753 WDR64B1ANS9 1081 aa6.4□□□□□ -1.38
HERC4-215ENST00000515753 SUPT5HO00267 1087 aaKnown RBP6.4□□□□□ -1.38
HERC4-215ENST00000515753 ANKRD34AQ69YU3 496 aa6.4□□□□□ -1.38
HERC4-215ENST00000515753 FDX2Q6P4F2 183 aa6.4□□□□□ -1.38
HERC4-215ENST00000515753 INTS5Q6P9B9 1019 aaKnown RBP6.4□□□□□ -1.38
HERC4-215ENST00000515753 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.4□□□□□ -1.38
HERC4-215ENST00000515753 MFSD14AQ96MC6 490 aa6.4□□□□□ -1.38
HERC4-215ENST00000515753 RNF208Q9H0X6 261 aa6.4□□□□□ -1.38
HERC4-215ENST00000515753 USTQ9Y2C2 406 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms