RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 HSP90AB3PQ58FF7 597 aa14.81□□□□□ -0.04
SMAD1-215ENST00000515385 MCTP2Q6DN12 878 aa14.81□□□□□ -0.04
SMAD1-215ENST00000515385 MMS22LQ6ZRQ5 1243 aa14.81□□□□□ -0.04
SMAD1-215ENST00000515385 CLASRPQ8N2M8 674 aaKnown RBP14.81□□□□□ -0.04
SMAD1-215ENST00000515385 FSIP1Q8NA03 581 aa14.81□□□□□ -0.04
SMAD1-215ENST00000515385 SYTL4Q96C24 671 aaPredicted RBP14.81□□□□□ -0.04
SMAD1-215ENST00000515385 DDX11Q96FC9 970 aa14.81□□□□□ -0.04
SMAD1-215ENST00000515385 TUBB2BQ9BVA1 445 aa14.81□□□□□ -0.04
SMAD1-215ENST00000515385 KIAA1468Q9P260 1216 aa14.81□□□□□ -0.04
SMAD1-215ENST00000515385 DTNBO60941 627 aa14.81□□□□□ -0.04
SMAD1-215ENST00000515385 RPAINQ86UA6 219 aa14.81□□□□□ -0.04
SMAD1-215ENST00000515385 DRC1Q96MC2 740 aa14.81□□□□□ -0.04
SMAD1-215ENST00000515385 SDF4Q9BRK5 362 aa14.81□□□□□ -0.04
SMAD1-215ENST00000515385 ACBD3Q9H3P7 528 aa14.81□□□□□ -0.04
SMAD1-215ENST00000515385 VPS18Q9P253 973 aa14.81□□□□□ -0.04
SMAD1-215ENST00000515385 KIF1CO43896 1103 aaKnown RBP14.8□□□□□ -0.04
SMAD1-215ENST00000515385 GSCP56915 257 aaPredicted RBP14.8□□□□□ -0.04
SMAD1-215ENST00000515385 NLRP12P59046 1061 aa14.8□□□□□ -0.04
SMAD1-215ENST00000515385 C14orf37Q86TY3 774 aa14.8□□□□□ -0.04
SMAD1-215ENST00000515385 FMR1NBQ8N0W7 255 aaPredicted RBP14.8□□□□□ -0.04
SMAD1-215ENST00000515385 MRPS27Q92552 414 aaKnown RBP14.8□□□□□ -0.04
SMAD1-215ENST00000515385 VWA3AA6NCI4 1184 aa14.8□□□□□ -0.04
SMAD1-215ENST00000515385 FANCCQ00597 558 aa14.8□□□□□ -0.04
SMAD1-215ENST00000515385 RRS1Q15050 365 aaKnown RBP14.8□□□□□ -0.04
SMAD1-215ENST00000515385 GGT6Q6P531 493 aa14.8□□□□□ -0.04
SMAD1-215ENST00000515385 TICAM2Q86XR7 235 aa14.8□□□□□ -0.04
SMAD1-215ENST00000515385 ERC1Q8IUD2 1116 aa14.8□□□□□ -0.04
SMAD1-215ENST00000515385 SMARCC2Q8TAQ2 1214 aa14.8□□□□□ -0.04
SMAD1-215ENST00000515385 FAM71BQ8TC56 605 aa14.8□□□□□ -0.04
SMAD1-215ENST00000515385 GBP3Q9H0R5 595 aa14.8□□□□□ -0.04
SMAD1-215ENST00000515385 RAB21Q9UL25 225 aa14.8□□□□□ -0.04
SMAD1-215ENST00000515385 A0A087WUV0 522 aaPredicted RBP14.79□□□□□ -0.04
SMAD1-215ENST00000515385 IDI1Q13907 227 aa14.79□□□□□ -0.04
SMAD1-215ENST00000515385 PPP2R2CQ9Y2T4 447 aa14.79□□□□□ -0.04
SMAD1-215ENST00000515385 FAM208AQ9UK61 1670 aaKnown RBP14.78□□□□□ -0.04
SMAD1-215ENST00000515385 PRR29P0C7W0 189 aa14.78□□□□□ -0.04
SMAD1-215ENST00000515385 EIF5P55010 431 aaKnown RBP14.78□□□□□ -0.04
SMAD1-215ENST00000515385 GNG11P61952 73 aa14.78□□□□□ -0.04
SMAD1-215ENST00000515385 HSP90B2PQ58FF3 399 aa14.78□□□□□ -0.04
SMAD1-215ENST00000515385 CT47A1Q5JQC4 288 aaPredicted RBP14.78□□□□□ -0.04
SMAD1-215ENST00000515385 ADALQ6DHV7 355 aa14.78□□□□□ -0.04
SMAD1-215ENST00000515385 UTP14AQ9BVJ6 771 aaKnown RBP14.78□□□□□ -0.04
SMAD1-215ENST00000515385 BABAM1Q9NWV8 329 aa14.78□□□□□ -0.04
SMAD1-215ENST00000515385 DONSONQ9NYP3 566 aa14.78□□□□□ -0.04
SMAD1-215ENST00000515385 NPHP4O75161 1426 aaPredicted RBP14.78□□□□□ -0.04
SMAD1-215ENST00000515385 PPFIA4O75335 1185 aa14.78□□□□□ -0.04
SMAD1-215ENST00000515385 ME1P48163 572 aa14.78□□□□□ -0.04
SMAD1-215ENST00000515385 BEND6Q5SZJ8 279 aaPredicted RBP14.78□□□□□ -0.04
SMAD1-215ENST00000515385 CEP112Q8N8E3 955 aa14.78□□□□□ -0.04
SMAD1-215ENST00000515385 PDE11AQ9HCR9 933 aa14.78□□□□□ -0.04
SMAD1-215ENST00000515385 MED4Q9NPJ6 270 aa14.78□□□□□ -0.04
SMAD1-215ENST00000515385 CACNA1FO60840 1977 aa14.78□□□□□ -0.04
SMAD1-215ENST00000515385 JCADQ9P266 1359 aa14.77□□□□□ -0.04
SMAD1-215ENST00000515385 SIGLEC1Q9BZZ2 1709 aa14.77□□□□□ -0.04
SMAD1-215ENST00000515385 FANCGO15287 622 aa14.77□□□□□ -0.04
SMAD1-215ENST00000515385 JAK2O60674 1132 aa14.77□□□□□ -0.04
SMAD1-215ENST00000515385 USP8P40818 1118 aa14.77□□□□□ -0.04
SMAD1-215ENST00000515385 STK3Q13188 491 aa14.77□□□□□ -0.04
SMAD1-215ENST00000515385 NCAPHQ15003 741 aa14.77□□□□□ -0.04
SMAD1-215ENST00000515385 MSANTD4Q8NCY6 345 aa14.77□□□□□ -0.04
SMAD1-215ENST00000515385 DDX54Q8TDD1 881 aaKnown RBP14.77□□□□□ -0.04
SMAD1-215ENST00000515385 MIS18AQ9NYP9 233 aa14.77□□□□□ -0.04
SMAD1-215ENST00000515385 MLH3Q9UHC1 1453 aa14.77□□□□□ -0.05
SMAD1-215ENST00000515385 IFIT2P09913 472 aaKnown RBP14.77□□□□□ -0.05
SMAD1-215ENST00000515385 OS9Q13438 667 aaPredicted RBP14.77□□□□□ -0.05
SMAD1-215ENST00000515385 DPCR1Q3MIW9 517 aa14.77□□□□□ -0.05
SMAD1-215ENST00000515385 SRGAP1Q7Z6B7 1085 aa14.77□□□□□ -0.05
SMAD1-215ENST00000515385 EPC1Q9H2F5 836 aa14.77□□□□□ -0.05
SMAD1-215ENST00000515385 TOMM22Q9NS69 142 aa14.77□□□□□ -0.05
SMAD1-215ENST00000515385 RAI14Q9P0K7 980 aa14.77□□□□□ -0.05
SMAD1-215ENST00000515385 ALKQ9UM73 1620 aa14.76□□□□□ -0.05
SMAD1-215ENST00000515385 NUTM2FA1L443 756 aa14.76□□□□□ -0.05
SMAD1-215ENST00000515385 STX10O60499 249 aa14.76□□□□□ -0.05
SMAD1-215ENST00000515385 CEBPZQ03701 1054 aaKnown RBP14.76□□□□□ -0.05
SMAD1-215ENST00000515385 NMIQ13287 307 aaPredicted RBP14.76□□□□□ -0.05
SMAD1-215ENST00000515385 DNAJC21Q5F1R6 531 aaKnown RBP14.76□□□□□ -0.05
SMAD1-215ENST00000515385 NUTM2GQ5VZR2 741 aa14.76□□□□□ -0.05
SMAD1-215ENST00000515385 TADA2BQ86TJ2 420 aa14.76□□□□□ -0.05
SMAD1-215ENST00000515385 VSTM4Q8IW00 320 aa14.76□□□□□ -0.05
SMAD1-215ENST00000515385 KIFC2Q96AC6 838 aa14.76□□□□□ -0.05
SMAD1-215ENST00000515385 USP28Q96RU2 1077 aa14.76□□□□□ -0.05
SMAD1-215ENST00000515385 L1RE1Q9UN81 338 aa14.76□□□□□ -0.05
SMAD1-215ENST00000515385 SPATA31D1Q6ZQQ2 1576 aa14.76□□□□□ -0.05
SMAD1-215ENST00000515385 CCDC196A0A1B0GTZ2 297 aa14.75□□□□□ -0.05
SMAD1-215ENST00000515385 SLC3A2P08195 630 aaKnown RBP14.75□□□□□ -0.05
SMAD1-215ENST00000515385 TOP1P11387 765 aaKnown RBP14.75□□□□□ -0.05
SMAD1-215ENST00000515385 UBASH3AP57075 661 aa14.75□□□□□ -0.05
SMAD1-215ENST00000515385 CHMP4BP1P59074 171 aa14.75□□□□□ -0.05
SMAD1-215ENST00000515385 MTX1Q13505 466 aa14.75□□□□□ -0.05
SMAD1-215ENST00000515385 LRRC31Q6UY01 552 aa14.75□□□□□ -0.05
SMAD1-215ENST00000515385 ERCC4Q92889 916 aaPredicted RBP14.75□□□□□ -0.05
SMAD1-215ENST00000515385 RTEL1Q9NZ71 1219 aa14.75□□□□□ -0.05
SMAD1-215ENST00000515385 USPL1Q5W0Q7 1092 aa14.75□□□□□ -0.05
SMAD1-215ENST00000515385 GPATCH11Q8N954 259 aa14.75□□□□□ -0.05
SMAD1-215ENST00000515385 TACO1Q9BSH4 297 aaKnown RBP14.75□□□□□ -0.05
SMAD1-215ENST00000515385 CXorf56Q9H5V9 222 aa14.75□□□□□ -0.05
SMAD1-215ENST00000515385 ZRANB1Q9UGI0 708 aa14.75□□□□□ -0.05
SMAD1-215ENST00000515385 MED23Q9ULK4 1368 aa14.75□□□□□ -0.05
SMAD1-215ENST00000515385 CHD1O14646 1710 aa14.74□□□□□ -0.05
SMAD1-215ENST00000515385 PFKFB2O60825 505 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms