RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	LGR5	O75473	907 aa		9.44	□□□□□ -0.9
HIPK1-210	ENST00000514621	ATG7	O95352	703 aa		9.44	□□□□□ -0.9
HIPK1-210	ENST00000514621	CD33	P20138	364 aa		9.44	□□□□□ -0.9
HIPK1-210	ENST00000514621	ALDH16A1	Q8IZ83	802 aa		9.44	□□□□□ -0.9
HIPK1-210	ENST00000514621	TMEM151A	Q8N4L1	468 aa		9.44	□□□□□ -0.9
HIPK1-210	ENST00000514621	GOLGA6L1	Q8N7Z2	621 aa		9.44	□□□□□ -0.9
HIPK1-210	ENST00000514621	PBXIP1	Q96AQ6	731 aa		9.44	□□□□□ -0.9
HIPK1-210	ENST00000514621	SLC26A8	Q96RN1	970 aa		9.44	□□□□□ -0.9
HIPK1-210	ENST00000514621	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	9.44	□□□□□ -0.9
HIPK1-210	ENST00000514621	EFS	O43281	561 aa		9.43	□□□□□ -0.9
HIPK1-210	ENST00000514621	GDF11	O95390	407 aa		9.43	□□□□□ -0.9
HIPK1-210	ENST00000514621	LAMC2	Q13753	1193 aa		9.43	□□□□□ -0.9
HIPK1-210	ENST00000514621	HIF1A	Q16665	826 aa		9.43	□□□□□ -0.9
HIPK1-210	ENST00000514621	SWI5	Q1ZZU3	235 aa		9.43	□□□□□ -0.9
HIPK1-210	ENST00000514621	FAM182B	Q5T319	152 aa		9.43	□□□□□ -0.9
HIPK1-210	ENST00000514621	SLCO4C1	Q6ZQN7	724 aa		9.43	□□□□□ -0.9
HIPK1-210	ENST00000514621	SIN3A	Q96ST3	1273 aa		9.43	□□□□□ -0.9
HIPK1-210	ENST00000514621	ADAMTS13	Q76LX8	1427 aa		9.42	□□□□□ -0.9
HIPK1-210	ENST00000514621	ADGRF5	Q8IZF2	1346 aa		9.42	□□□□□ -0.9
HIPK1-210	ENST00000514621	ARAF	P10398	606 aa		9.42	□□□□□ -0.9
HIPK1-210	ENST00000514621	WEE1	P30291	646 aa		9.42	□□□□□ -0.9
HIPK1-210	ENST00000514621	GALNT6	Q8NCL4	622 aa		9.42	□□□□□ -0.9
HIPK1-210	ENST00000514621	GGA1	Q9UJY5	639 aa		9.42	□□□□□ -0.9
HIPK1-210	ENST00000514621	TBX22	Q9Y458	520 aa		9.42	□□□□□ -0.9
HIPK1-210	ENST00000514621	CNTNAP5	Q8WYK1	1306 aa		9.41	□□□□□ -0.9
HIPK1-210	ENST00000514621	FOXO3	O43524	673 aa		9.41	□□□□□ -0.9
HIPK1-210	ENST00000514621	KANK3	Q6NY19	840 aa		9.41	□□□□□ -0.9
HIPK1-210	ENST00000514621	NGLY1	Q96IV0	654 aa		9.41	□□□□□ -0.9
HIPK1-210	ENST00000514621	STRN4	Q9NRL3	753 aa		9.41	□□□□□ -0.9
HIPK1-210	ENST00000514621	ZMIZ1	Q9ULJ6	1067 aa		9.41	□□□□□ -0.9
HIPK1-210	ENST00000514621	LTBP4	Q8N2S1	1624 aa		9.41	□□□□□ -0.9
HIPK1-210	ENST00000514621	NEUROD1	Q13562	356 aa		9.4	□□□□□ -0.9
HIPK1-210	ENST00000514621	CCDC82	Q8N4S0	544 aa		9.4	□□□□□ -0.9
HIPK1-210	ENST00000514621	KCTD17	Q8N5Z5	321 aa		9.4	□□□□□ -0.9
HIPK1-210	ENST00000514621	EDARADD	Q8WWZ3	215 aa		9.4	□□□□□ -0.9
HIPK1-210	ENST00000514621	VTI1A	Q96AJ9	217 aa		9.4	□□□□□ -0.9
HIPK1-210	ENST00000514621	SUSD3	Q96L08	255 aa		9.4	□□□□□ -0.9
HIPK1-210	ENST00000514621	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	9.4	□□□□□ -0.9
HIPK1-210	ENST00000514621	MARK1	Q9P0L2	795 aa		9.4	□□□□□ -0.9
HIPK1-210	ENST00000514621	SETBP1	Q9Y6X0	1596 aa		9.4	□□□□□ -0.9
HIPK1-210	ENST00000514621	PPL	O60437	1756 aa		9.4	□□□□□ -0.91
HIPK1-210	ENST00000514621	KCNA6	P17658	529 aa		9.39	□□□□□ -0.91
HIPK1-210	ENST00000514621	RTN1	Q16799	776 aa		9.39	□□□□□ -0.91
HIPK1-210	ENST00000514621	PODN	Q7Z5L7	613 aa		9.39	□□□□□ -0.91
HIPK1-210	ENST00000514621	DCAF11	Q8TEB1	546 aa		9.39	□□□□□ -0.91
HIPK1-210	ENST00000514621	STK32A	Q8WU08	396 aa		9.39	□□□□□ -0.91
HIPK1-210	ENST00000514621	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	9.39	□□□□□ -0.91
HIPK1-210	ENST00000514621	NRXN3	Q9Y4C0	1643 aa		9.38	□□□□□ -0.91
HIPK1-210	ENST00000514621	NEURL1B	A8MQ27	555 aa		9.38	□□□□□ -0.91
HIPK1-210	ENST00000514621	EPX	P11678	715 aa		9.38	□□□□□ -0.91
HIPK1-210	ENST00000514621	SNRPN	P63162	240 aa	Known RBP	9.38	□□□□□ -0.91
HIPK1-210	ENST00000514621	BEND7	Q8N7W2	519 aa	Predicted RBP	9.38	□□□□□ -0.91
HIPK1-210	ENST00000514621	HSH2D	Q96JZ2	352 aa		9.38	□□□□□ -0.91
HIPK1-210	ENST00000514621	KLF15	Q9UIH9	416 aa		9.38	□□□□□ -0.91
HIPK1-210	ENST00000514621	PRR12	Q9ULL5	1215 aa		9.38	□□□□□ -0.91
HIPK1-210	ENST00000514621	MET	P08581	1390 aa		9.37	□□□□□ -0.91
HIPK1-210	ENST00000514621	PIK3R4	Q99570	1358 aa		9.37	□□□□□ -0.91
HIPK1-210	ENST00000514621	DIP2A	Q14689	1571 aa		9.37	□□□□□ -0.91
HIPK1-210	ENST00000514621	IFT172	Q9UG01	1749 aa		9.37	□□□□□ -0.91
HIPK1-210	ENST00000514621	MYOM2	P54296	1465 aa		9.37	□□□□□ -0.91
HIPK1-210	ENST00000514621	NRXN1	Q9ULB1	1477 aa		9.37	□□□□□ -0.91
HIPK1-210	ENST00000514621	PHF20L1	A8MW92	1017 aa		9.37	□□□□□ -0.91
HIPK1-210	ENST00000514621	ADH6	P28332	368 aa		9.37	□□□□□ -0.91
HIPK1-210	ENST00000514621	ZNF280C	Q8ND82	737 aa		9.37	□□□□□ -0.91
HIPK1-210	ENST00000514621	CEP63	Q96MT8	703 aa		9.37	□□□□□ -0.91
HIPK1-210	ENST00000514621	AVEN	Q9NQS1	362 aa	Predicted RBP	9.37	□□□□□ -0.91
HIPK1-210	ENST00000514621	PIK3C2G	O75747	1445 aa		9.37	□□□□□ -0.91
HIPK1-210	ENST00000514621	ALK	Q9UM73	1620 aa		9.36	□□□□□ -0.91
HIPK1-210	ENST00000514621	HOXB4	P17483	251 aa	Predicted RBP	9.36	□□□□□ -0.91
HIPK1-210	ENST00000514621	ZNF468	Q5VIY5	522 aa	Predicted RBP	9.36	□□□□□ -0.91
HIPK1-210	ENST00000514621	C1orf115	Q9H7X2	142 aa		9.36	□□□□□ -0.91
HIPK1-210	ENST00000514621	C14orf93	Q9H972	538 aa	Known RBP	9.36	□□□□□ -0.91
HIPK1-210	ENST00000514621	BRD7	Q9NPI1	651 aa		9.36	□□□□□ -0.91
HIPK1-210	ENST00000514621	AMOTL2	Q9Y2J4	779 aa		9.36	□□□□□ -0.91
HIPK1-210	ENST00000514621	STRCP1	A6NGW2	1772 aa		9.36	□□□□□ -0.91
HIPK1-210	ENST00000514621	PTPRU	Q92729	1446 aa		9.36	□□□□□ -0.91
HIPK1-210	ENST00000514621	CPS1	P31327	1500 aa		9.36	□□□□□ -0.91
HIPK1-210	ENST00000514621	CLSPN	Q9HAW4	1339 aa		9.35	□□□□□ -0.91
HIPK1-210	ENST00000514621	PRMT3	O60678	531 aa		9.35	□□□□□ -0.91
HIPK1-210	ENST00000514621	GRIN2C	Q14957	1233 aa		9.35	□□□□□ -0.91
HIPK1-210	ENST00000514621	TMEM164	Q5U3C3	297 aa		9.35	□□□□□ -0.91
HIPK1-210	ENST00000514621	FCHSD1	Q86WN1	690 aa		9.35	□□□□□ -0.91
HIPK1-210	ENST00000514621	PRIMPOL	Q96LW4	560 aa		9.35	□□□□□ -0.91
HIPK1-210	ENST00000514621	LRRC7	Q96NW7	1537 aa		9.35	□□□□□ -0.91
HIPK1-210	ENST00000514621	NWD1	Q149M9	1564 aa		9.34	□□□□□ -0.91
HIPK1-210	ENST00000514621	ZEB1	P37275	1124 aa	Predicted RBP	9.34	□□□□□ -0.91
HIPK1-210	ENST00000514621	PCBP4	P57723	403 aa	Known RBP	9.34	□□□□□ -0.91
HIPK1-210	ENST00000514621	TYRO3	Q06418	890 aa		9.34	□□□□□ -0.91
HIPK1-210	ENST00000514621	SFSWAP	Q12872	951 aa	Known RBP	9.34	□□□□□ -0.91
HIPK1-210	ENST00000514621	IER5	Q5VY09	327 aa		9.34	□□□□□ -0.91
HIPK1-210	ENST00000514621	TMEM132E	Q6IEE7	984 aa		9.34	□□□□□ -0.91
HIPK1-210	ENST00000514621	BTLA	Q7Z6A9	289 aa		9.34	□□□□□ -0.91
HIPK1-210	ENST00000514621	RRAGC	Q9HB90	399 aa		9.34	□□□□□ -0.91
HIPK1-210	ENST00000514621	CHD2	O14647	1828 aa	Known RBP	9.33	□□□□□ -0.92
HIPK1-210	ENST00000514621	AMPD1	P23109	780 aa		9.33	□□□□□ -0.92
HIPK1-210	ENST00000514621	KCNQ4	P56696	695 aa		9.33	□□□□□ -0.92
HIPK1-210	ENST00000514621	BTBD6	Q96KE9	485 aa		9.33	□□□□□ -0.92
HIPK1-210	ENST00000514621	TMEM94	Q12767	1356 aa		9.33	□□□□□ -0.92
HIPK1-210	ENST00000514621	SETD1A	O15047	1707 aa	Known RBP	9.33	□□□□□ -0.92
HIPK1-210	ENST00000514621	NKTR	P30414	1462 aa	Known RBP	9.33	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms