RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 MYH3P11055 1940 aa13.21□□□□□ -0.3
DDR1-276ENST00000514534 MED23Q9ULK4 1368 aa13.2□□□□□ -0.3
DDR1-276ENST00000514534 RBBP6Q7Z6E9 1792 aaKnown RBP13.2□□□□□ -0.3
DDR1-276ENST00000514534 WNT10BO00744 389 aa13.2□□□□□ -0.3
DDR1-276ENST00000514534 INHBEP58166 350 aa13.2□□□□□ -0.3
DDR1-276ENST00000514534 PRAMEF18Q5VWM3 479 aa13.2□□□□□ -0.3
DDR1-276ENST00000514534 APOBEC3FQ8IUX4 373 aaKnown RBP13.2□□□□□ -0.3
DDR1-276ENST00000514534 CDC5LQ99459 802 aaKnown RBP13.2□□□□□ -0.3
DDR1-276ENST00000514534 SCAF8Q9UPN6 1271 aaKnown RBP13.2□□□□□ -0.3
DDR1-276ENST00000514534 ZNF646O15015 1829 aaPredicted RBP13.19□□□□□ -0.3
DDR1-276ENST00000514534 MANSC4A6NHS7 340 aaPredicted RBP13.19□□□□□ -0.3
DDR1-276ENST00000514534 HABP4Q5JVS0 413 aaKnown RBP13.19□□□□□ -0.3
DDR1-276ENST00000514534 DUSP27Q5VZP5 1158 aa13.19□□□□□ -0.3
DDR1-276ENST00000514534 MYD88Q99836 296 aa13.19□□□□□ -0.3
DDR1-276ENST00000514534 TRIM17Q9Y577 477 aa13.19□□□□□ -0.3
DDR1-276ENST00000514534 SPEF2Q9C093 1822 aa13.18□□□□□ -0.3
DDR1-276ENST00000514534 COL1A1P02452 1464 aaPredicted RBP13.18□□□□□ -0.3
DDR1-276ENST00000514534 LAMB1P07942 1786 aa13.18□□□□□ -0.3
DDR1-276ENST00000514534 PTPN12Q05209 780 aaKnown RBP13.18□□□□□ -0.3
DDR1-276ENST00000514534 DACT2Q5SW24 774 aa13.18□□□□□ -0.3
DDR1-276ENST00000514534 STRIP1Q5VSL9 837 aa13.18□□□□□ -0.3
DDR1-276ENST00000514534 SPRYD7Q5W111 196 aa13.18□□□□□ -0.3
DDR1-276ENST00000514534 FBXW7Q969H0 707 aa13.18□□□□□ -0.3
DDR1-276ENST00000514534 CCDC85AQ96PX6 553 aaPredicted RBP13.18□□□□□ -0.3
DDR1-276ENST00000514534 CWC25Q9NXE8 425 aaPredicted RBP13.18□□□□□ -0.3
DDR1-276ENST00000514534 RALBP1Q15311 655 aa13.17□□□□□ -0.3
DDR1-276ENST00000514534 COA1Q9GZY4 146 aa13.17□□□□□ -0.3
DDR1-276ENST00000514534 ANGEL1Q9UNK9 670 aaKnown RBP13.17□□□□□ -0.3
DDR1-276ENST00000514534 TRIM35Q9UPQ4 493 aa13.17□□□□□ -0.3
DDR1-276ENST00000514534 ECM29Q5VYK3 1845 aa13.16□□□□□ -0.3
DDR1-276ENST00000514534 SASH1O94885 1247 aa13.16□□□□□ -0.3
DDR1-276ENST00000514534 DDX58O95786 925 aaKnown RBP13.16□□□□□ -0.3
DDR1-276ENST00000514534 ZBTB48P10074 688 aaPredicted RBP13.16□□□□□ -0.3
DDR1-276ENST00000514534 CCT4P50991 539 aaKnown RBP13.16□□□□□ -0.3
DDR1-276ENST00000514534 PRKG1Q13976 671 aa13.16□□□□□ -0.3
DDR1-276ENST00000514534 LDLRAD1Q5T700 205 aa13.16□□□□□ -0.3
DDR1-276ENST00000514534 OTOP1Q7RTM1 612 aa13.16□□□□□ -0.3
DDR1-276ENST00000514534 CCDC146Q8IYE0 955 aa13.16□□□□□ -0.3
DDR1-276ENST00000514534 RUNDC1Q96C34 613 aa13.16□□□□□ -0.3
DDR1-276ENST00000514534 ERO1AQ96HE7 468 aa13.16□□□□□ -0.3
DDR1-276ENST00000514534 CHMP4AQ9BY43 222 aa13.16□□□□□ -0.3
DDR1-276ENST00000514534 R3HDMLQ9H3Y0 253 aa13.16□□□□□ -0.3
DDR1-276ENST00000514534 BSDC1Q9NW68 430 aaPredicted RBP13.16□□□□□ -0.3
DDR1-276ENST00000514534 TTLL5Q6EMB2 1281 aa13.15□□□□□ -0.3
DDR1-276ENST00000514534 OTUD7BQ6GQQ9 843 aa13.15□□□□□ -0.3
DDR1-276ENST00000514534 IFNL1Q8IU54 200 aa13.15□□□□□ -0.3
DDR1-276ENST00000514534 SLC10A4Q96EP9 437 aa13.15□□□□□ -0.3
DDR1-276ENST00000514534 METTL22Q9BUU2 404 aaPredicted RBP13.15□□□□□ -0.3
DDR1-276ENST00000514534 MXD3Q9BW11 206 aa13.15□□□□□ -0.3
DDR1-276ENST00000514534 PHAXQ9H814 394 aaKnown RBP13.15□□□□□ -0.3
DDR1-276ENST00000514534 MINPP1Q9UNW1 487 aa13.15□□□□□ -0.3
DDR1-276ENST00000514534 LEMD3Q9Y2U8 911 aa13.15□□□□□ -0.3
DDR1-276ENST00000514534 KIAA0100Q14667 2235 aaKnown RBP13.15□□□□□ -0.31
DDR1-276ENST00000514534 POTEFA5A3E0 1075 aa13.14□□□□□ -0.31
DDR1-276ENST00000514534 UNCXA6NJT0 531 aa13.14□□□□□ -0.31
DDR1-276ENST00000514534 PPP1R12BO60237 982 aaPredicted RBP13.14□□□□□ -0.31
DDR1-276ENST00000514534 CTSWP56202 376 aa13.14□□□□□ -0.31
DDR1-276ENST00000514534 MAP3K11Q16584 847 aa13.14□□□□□ -0.31
DDR1-276ENST00000514534 MBIPQ9NS73 344 aa13.14□□□□□ -0.31
DDR1-276ENST00000514534 IGHMBP2P38935 993 aaKnown RBP13.13□□□□□ -0.31
DDR1-276ENST00000514534 WDR43Q15061 677 aaKnown RBP eCLIP13.13□□□□□ -0.31
DDR1-276ENST00000514534 KIAA0825Q8IV33 1275 aa13.13□□□□□ -0.31
DDR1-276ENST00000514534 JARID2Q92833 1246 aaPredicted RBP13.13□□□□□ -0.31
DDR1-276ENST00000514534 WNK4Q96J92 1243 aa13.13□□□□□ -0.31
DDR1-276ENST00000514534 DEFB129Q9H1M3 183 aa13.13□□□□□ -0.31
DDR1-276ENST00000514534 PTPN22Q9Y2R2 807 aa13.13□□□□□ -0.31
DDR1-276ENST00000514534 PPP2R3BQ9Y5P8 575 aa13.13□□□□□ -0.31
DDR1-276ENST00000514534 DLGAP5Q15398 846 aa13.12□□□□□ -0.31
DDR1-276ENST00000514534 TTLL11Q8NHH1 800 aa13.12□□□□□ -0.31
DDR1-276ENST00000514534 ARMC5Q96C12 935 aa13.12□□□□□ -0.31
DDR1-276ENST00000514534 ZBED3Q96IU2 234 aaPredicted RBP13.12□□□□□ -0.31
DDR1-276ENST00000514534 TMEM106CQ9BVX2 250 aa13.12□□□□□ -0.31
DDR1-276ENST00000514534 ANKRD2Q9GZV1 360 aa13.12□□□□□ -0.31
DDR1-276ENST00000514534 EFCC1Q9HA90 598 aa13.12□□□□□ -0.31
DDR1-276ENST00000514534 ZNF804BA4D1E1 1349 aa13.12□□□□□ -0.31
DDR1-276ENST00000514534 WTIPA6NIX2 430 aaPredicted RBP13.11□□□□□ -0.31
DDR1-276ENST00000514534 MYO1BO43795 1136 aa13.11□□□□□ -0.31
DDR1-276ENST00000514534 CALD1Q05682 793 aaKnown RBP13.11□□□□□ -0.31
DDR1-276ENST00000514534 NEXNQ0ZGT2 675 aa13.11□□□□□ -0.31
DDR1-276ENST00000514534 ARHGEF6Q15052 776 aa13.11□□□□□ -0.31
DDR1-276ENST00000514534 SUPT20HL1Q3ZLR7 823 aa13.11□□□□□ -0.31
DDR1-276ENST00000514534 GREM2Q9H772 168 aa13.11□□□□□ -0.31
DDR1-276ENST00000514534 IGF2BP3O00425 579 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDR1-276ENST00000514534 ZNF853P0CG23 659 aa13.1□□□□□ -0.31
DDR1-276ENST00000514534 IREB2P48200 963 aaKnown RBP13.1□□□□□ -0.31
DDR1-276ENST00000514534 FXR1P51114 621 aaKnown RBP eCLIP13.1□□□□□ -0.31
DDR1-276ENST00000514534 GNAI1P63096 354 aa13.1□□□□□ -0.31
DDR1-276ENST00000514534 GTF2IP78347 998 aa13.1□□□□□ -0.31
DDR1-276ENST00000514534 SP3Q02447 781 aa13.1□□□□□ -0.31
DDR1-276ENST00000514534 CCDC30Q5VVM6 783 aa13.1□□□□□ -0.31
DDR1-276ENST00000514534 TXNRD3Q86VQ6 643 aa13.1□□□□□ -0.31
DDR1-276ENST00000514534 MTMR14Q8NCE2 650 aa13.1□□□□□ -0.31
DDR1-276ENST00000514534 CD99L2Q8TCZ2 262 aa13.1□□□□□ -0.31
DDR1-276ENST00000514534 MPHOSPH8Q99549 860 aa13.1□□□□□ -0.31
DDR1-276ENST00000514534 IFT57Q9NWB7 429 aa13.1□□□□□ -0.31
DDR1-276ENST00000514534 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.1□□□□□ -0.31
DDR1-276ENST00000514534 FZD1Q9UP38 647 aa13.1□□□□□ -0.31
DDR1-276ENST00000514534 MAP3K2Q9Y2U5 619 aa13.1□□□□□ -0.31
DDR1-276ENST00000514534 MYBBP1AQ9BQG0 1328 aaKnown RBP13.1□□□□□ -0.31
DDR1-276ENST00000514534 ELL2O00472 640 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms